63 homologs were found in PanDaTox collection
for query gene Lferr_0042 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  99.74 
 
 		 385 aa  761    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 402 aa  800    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  57.89 
 
 		 400 aa  460  9.999999999999999e-129  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  57.89 
 
 		 400 aa  460  9.999999999999999e-129  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  48.51 
 
 		 387 aa  357  1.9999999999999998e-97  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  47.37 
 
 		 389 aa  318  1e-85  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  47.37 
 
 		 389 aa  318  1e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  49.59 
 
 		 419 aa  314  1.9999999999999998e-84  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  50.56 
 
 		 383 aa  313  2.9999999999999996e-84  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  45.8 
 
 		 381 aa  308  8e-83  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  46.76 
 
 		 384 aa  296  3e-79  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  47.11 
 
 		 386 aa  285  7e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  46.39 
 
 		 386 aa  283  3.0000000000000004e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  49.2 
 
 		 429 aa  283  3.0000000000000004e-75  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  48.75 
 
 		 383 aa  281  2e-74  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  48.61 
 
 		 382 aa  263  4.999999999999999e-69  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  47.53 
 
 		 378 aa  256  4e-67  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  36.07 
 
 		 361 aa  209  8e-53  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  34.08 
 
 		 395 aa  177  3e-43  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  33.92 
 
 		 366 aa  163  4.0000000000000004e-39  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  33.33 
 
 		 435 aa  160  4e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  30.56 
 
 		 404 aa  154  4e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  30.85 
 
 		 374 aa  151  2e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  31.08 
 
 		 369 aa  144  3e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
BN001304  ANIA_11016  malic acid transport protein, putative (AFU_orthologue; AFUA_4G09410)  28.87 
 
 		 388 aa  142  9.999999999999999e-33  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.522177 
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  31.58 
 
 		 375 aa  140  4.999999999999999e-32  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  30.15 
 
 		 517 aa  134  1.9999999999999998e-30  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  28.46 
 
 		 385 aa  130  3e-29  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  30.16 
 
 		 395 aa  127  3e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  28.41 
 
 		 346 aa  124  2e-27  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  25.56 
 
 		 353 aa  115  1.0000000000000001e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_009043  PICST_30900  predicted protein  25.72 
 
 		 449 aa  103  7e-21  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
NC_009043  PICST_30901  predicted protein  28.37 
 
 		 433 aa  102  1e-20  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.314839 
 
 
-
 
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  28.35 
 
 		 374 aa  100  7e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
NC_009043  PICST_44239  predicted protein  26.49 
 
 		 373 aa  97.1  5e-19  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.182141 
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  22.54 
 
 		 395 aa  95.5  1e-18  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
NC_013739  Cwoe_4856  C4-dicarboxylate transporter/malic acid transport protein  27.49 
 
 		 363 aa  79.7  0.00000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.0594836  normal  1 
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  22.38 
 
 		 375 aa  77.4  0.0000000000004  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0796042 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  20.94 
 
 		 343 aa  72.4  0.00000000001  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  26.4 
 
 		 373 aa  67.4  0.0000000004  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  22.67 
 
 		 384 aa  66.6  0.0000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  19.78 
 
 		 347 aa  61.6  0.00000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  24.77 
 
 		 374 aa  58.9  0.0000002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_006682  CNM00310  conserved hypothetical protein  25.2 
 
 		 382 aa  58.5  0.0000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.00875379  n/a   
 
 
-
 
NC_009043  PICST_30899  predicted protein  23.91 
 
 		 438 aa  58.2  0.0000003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.341718  normal  0.766697 
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  24.35 
 
 		 360 aa  57.4  0.0000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  23.26 
 
 		 357 aa  57.8  0.0000004  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  28.43 
 
 		 356 aa  55.8  0.000001  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  23.12 
 
 		 357 aa  55.1  0.000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_007484  Noc_0542  hypothetical protein  26.15 
 
 		 239 aa  55.1  0.000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  22.78 
 
 		 331 aa  54.7  0.000003  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  22.67 
 
 		 326 aa  53.5  0.000006  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_008599  CFF8240_0914  C4-dicarboxylate transporter/malic acid transport protein  22.53 
 
 		 357 aa  52  0.00002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.120937  n/a   
 
 
-
 
NC_013235  Namu_3523  C4-dicarboxylate transporter/malic acid transport protein  24.41 
 
 		 366 aa  51.2  0.00003  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00371301  normal  0.143874 
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  20.63 
 
 		 339 aa  50.4  0.00005  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_013235  Namu_4602  C4-dicarboxylate transporter/malic acid transport protein  24.51 
 
 		 357 aa  48.9  0.0002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.681396 
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  20.31 
 
 		 326 aa  48.9  0.0002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  20.94 
 
 		 326 aa  46.2  0.001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  21.31 
 
 		 329 aa  45.4  0.002  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_010172  Mext_0212  C4-dicarboxylate transporter/malic acid transport protein  25.4 
 
 		 335 aa  44.3  0.004  Methylobacterium extorquens PA1  Bacteria  normal  0.187317  normal  1 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  21.12 
 
 		 321 aa  43.9  0.005  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  21.4 
 
 		 322 aa  43.5  0.006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_0156  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 		 335 aa  43.1  0.008  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131212  normal  0.103704 
 
 
-
 
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