More than 300 homologs were found in PanDaTox collection
for query gene Lcho_2167 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  100 
 
 
678 aa  1375    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  45.19 
 
 
585 aa  410  1e-113  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.25 
 
 
566 aa  397  1e-109  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  43.32 
 
 
541 aa  385  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
587 aa  379  1e-103  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.77 
 
 
584 aa  370  1e-101  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.92 
 
 
564 aa  366  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
584 aa  368  1e-100  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  49.12 
 
 
482 aa  363  7.0000000000000005e-99  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.84 
 
 
579 aa  363  7.0000000000000005e-99  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  48.34 
 
 
464 aa  362  1e-98  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  47.79 
 
 
517 aa  362  1e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  48.34 
 
 
517 aa  362  1e-98  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  48.34 
 
 
517 aa  362  2e-98  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  47.36 
 
 
513 aa  361  3e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
598 aa  360  6e-98  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  40.85 
 
 
585 aa  358  1.9999999999999998e-97  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  48.13 
 
 
517 aa  358  1.9999999999999998e-97  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  46.8 
 
 
513 aa  357  5.999999999999999e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
519 aa  356  6.999999999999999e-97  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  47.57 
 
 
517 aa  355  2e-96  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  47.69 
 
 
517 aa  353  4e-96  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  47.03 
 
 
517 aa  352  1e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  46.92 
 
 
541 aa  350  6e-95  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  46.92 
 
 
541 aa  350  6e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
515 aa  348  3e-94  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  44.53 
 
 
546 aa  347  4e-94  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
513 aa  347  5e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  44.53 
 
 
546 aa  346  7e-94  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  44.53 
 
 
546 aa  346  7e-94  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  44.33 
 
 
526 aa  346  7e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  44.53 
 
 
546 aa  346  7e-94  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  44.53 
 
 
546 aa  346  7e-94  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
518 aa  344  2e-93  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  44.98 
 
 
511 aa  340  4e-92  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  44.68 
 
 
512 aa  340  4e-92  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
627 aa  338  1.9999999999999998e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
519 aa  337  3.9999999999999995e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  40.08 
 
 
542 aa  337  3.9999999999999995e-91  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
611 aa  335  2e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
518 aa  335  2e-90  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
518 aa  332  1e-89  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
521 aa  330  5.0000000000000004e-89  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
598 aa  329  8e-89  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.62 
 
 
532 aa  329  9e-89  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
520 aa  325  1e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
521 aa  325  2e-87  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  43.01 
 
 
513 aa  323  4e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
549 aa  323  6e-87  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
519 aa  323  6e-87  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.39 
 
 
618 aa  323  7e-87  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
544 aa  322  1.9999999999999998e-86  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  40.8 
 
 
515 aa  321  3e-86  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
621 aa  321  3e-86  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
534 aa  320  3.9999999999999996e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
513 aa  319  1e-85  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.46 
 
 
513 aa  319  1e-85  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
584 aa  319  1e-85  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
545 aa  318  3e-85  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
544 aa  316  7e-85  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
545 aa  316  7e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
545 aa  316  7e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.53 
 
 
515 aa  317  7e-85  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
515 aa  315  1.9999999999999998e-84  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  39.21 
 
 
542 aa  313  7.999999999999999e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
519 aa  311  2e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.94 
 
 
529 aa  309  1.0000000000000001e-82  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  52.56 
 
 
584 aa  308  2.0000000000000002e-82  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  40.59 
 
 
629 aa  307  4.0000000000000004e-82  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  39.25 
 
 
520 aa  304  3.0000000000000004e-81  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.72 
 
 
519 aa  302  1e-80  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  39.71 
 
 
521 aa  301  3e-80  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  39.71 
 
 
521 aa  301  3e-80  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  39.71 
 
 
521 aa  301  3e-80  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  39.78 
 
 
485 aa  301  4e-80  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  39.78 
 
 
485 aa  301  4e-80  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  40.09 
 
 
456 aa  300  6e-80  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.34 
 
 
519 aa  298  2e-79  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
563 aa  297  3e-79  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
594 aa  297  4e-79  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.71 
 
 
517 aa  295  2e-78  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  53.03 
 
 
550 aa  294  3e-78  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  52.15 
 
 
653 aa  294  3e-78  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  52.15 
 
 
653 aa  294  3e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
514 aa  295  3e-78  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
719 aa  294  4e-78  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
545 aa  293  5e-78  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  52.55 
 
 
550 aa  293  5e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  34.12 
 
 
544 aa  292  1e-77  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  51.22 
 
 
542 aa  292  1e-77  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.67 
 
 
512 aa  292  1e-77  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  52.66 
 
 
561 aa  291  3e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  53.47 
 
 
552 aa  290  8e-77  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
524 aa  289  1e-76  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  55.94 
 
 
554 aa  289  1e-76  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  50.89 
 
 
394 aa  289  1e-76  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  58.25 
 
 
536 aa  289  1e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  48.79 
 
 
589 aa  288  2e-76  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  51.36 
 
 
602 aa  286  9e-76  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  49.39 
 
 
557 aa  285  2.0000000000000002e-75  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
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