More than 300 homologs were found in PanDaTox collection
for query gene Lcho_0230 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_0230  metal dependent phosphohydrolase  100 
 
 
383 aa  769    Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000415135 
 
 
-
 
NC_008700  Sama_3396  response regulator receiver protein  48.19 
 
 
376 aa  337  2.9999999999999997e-91  Shewanella amazonensis SB2B  Bacteria  normal  0.759703  normal 
 
 
-
 
NC_007614  Nmul_A1663  metal dependent phosphohydrolase  41.55 
 
 
375 aa  310  2.9999999999999997e-83  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.860701  n/a   
 
 
-
 
NC_009092  Shew_2713  metal dependent phosphohydrolase  41.91 
 
 
370 aa  278  1e-73  Shewanella loihica PV-4  Bacteria  normal  0.409072  decreased coverage  0.0000724221 
 
 
-
 
NC_008789  Hhal_1355  metal dependent phosphohydrolase  43.73 
 
 
391 aa  276  5e-73  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3428  metal dependent phosphohydrolase  39.55 
 
 
371 aa  275  1.0000000000000001e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3180  metal dependent phosphohydrolase  39.25 
 
 
394 aa  253  4.0000000000000004e-66  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1919  hypothetical protein  34.17 
 
 
384 aa  203  4e-51  Vibrio cholerae O395  Bacteria  normal  0.731705  n/a   
 
 
-
 
NC_009783  VIBHAR_02528  hypothetical protein  26.54 
 
 
374 aa  153  5.9999999999999996e-36  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  39.34 
 
 
328 aa  153  5.9999999999999996e-36  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  39.35 
 
 
337 aa  151  1e-35  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  38.53 
 
 
339 aa  147  3e-34  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 
333 aa  147  4.0000000000000006e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1166  metal dependent phosphohydrolase  40.2 
 
 
396 aa  147  4.0000000000000006e-34  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  48.31 
 
 
399 aa  146  5e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  38.43 
 
 
362 aa  146  6e-34  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  40.65 
 
 
354 aa  145  8.000000000000001e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  37.94 
 
 
346 aa  145  8.000000000000001e-34  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  38.1 
 
 
338 aa  145  1e-33  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  38.1 
 
 
338 aa  145  1e-33  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  43.37 
 
 
365 aa  145  1e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  36.84 
 
 
338 aa  145  1e-33  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  42.05 
 
 
363 aa  144  3e-33  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0963  response regulator  39.41 
 
 
441 aa  142  9e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  37.23 
 
 
338 aa  142  9.999999999999999e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  37.5 
 
 
268 aa  142  9.999999999999999e-33  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  37.23 
 
 
338 aa  142  9.999999999999999e-33  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  36.44 
 
 
338 aa  142  9.999999999999999e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  38.97 
 
 
360 aa  142  9.999999999999999e-33  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0961  metal dependent phosphohydrolase  45.05 
 
 
212 aa  142  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  37.23 
 
 
338 aa  142  9.999999999999999e-33  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  37.23 
 
 
338 aa  141  1.9999999999999998e-32  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  43.96 
 
 
619 aa  140  3e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  38.32 
 
 
348 aa  140  3e-32  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  36.36 
 
 
352 aa  140  3.9999999999999997e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  37.38 
 
 
348 aa  140  3.9999999999999997e-32  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  34.94 
 
 
339 aa  140  4.999999999999999e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  35.32 
 
 
340 aa  140  4.999999999999999e-32  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  37.2 
 
 
377 aa  139  8.999999999999999e-32  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  38.38 
 
 
350 aa  138  1e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  38.53 
 
 
365 aa  138  2e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  36.86 
 
 
492 aa  137  2e-31  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  40.2 
 
 
340 aa  137  2e-31  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  38.74 
 
 
347 aa  137  3.0000000000000003e-31  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  43.58 
 
 
345 aa  137  4e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  35.16 
 
 
338 aa  137  4e-31  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  39.18 
 
 
367 aa  137  4e-31  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  35.66 
 
 
379 aa  136  5e-31  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_014213  Mesil_3410  hypothetical protein  45.12 
 
 
1333 aa  136  5e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.277305  normal  0.24869 
 
 
-
 
NC_012560  Avin_25160  response regulator  36.13 
 
 
356 aa  136  7.000000000000001e-31  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003572  hypothetical protein  24.79 
 
 
374 aa  135  8e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  36.71 
 
 
377 aa  136  8e-31  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  42.94 
 
 
382 aa  135  9e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1281  metal dependent phosphohydrolase  39.57 
 
 
421 aa  135  9.999999999999999e-31  Shewanella baltica OS223  Bacteria  normal  normal  0.246487 
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  39.38 
 
 
522 aa  135  9.999999999999999e-31  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 
343 aa  135  9.999999999999999e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_009997  Sbal195_3239  metal dependent phosphohydrolase  39.57 
 
 
421 aa  135  9.999999999999999e-31  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  37.2 
 
 
339 aa  135  9.999999999999999e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3096  metal dependent phosphohydrolase  39.57 
 
 
421 aa  135  9.999999999999999e-31  Shewanella baltica OS185  Bacteria  normal  0.789641  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  36.84 
 
 
395 aa  135  9.999999999999999e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_009052  Sbal_3086  metal dependent phosphohydrolase  39.57 
 
 
421 aa  135  9.999999999999999e-31  Shewanella baltica OS155  Bacteria  normal  0.688804  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  37.18 
 
 
350 aa  134  1.9999999999999998e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  34.98 
 
 
331 aa  134  1.9999999999999998e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  35.93 
 
 
373 aa  134  3e-30  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1148  metal dependent phosphohydrolase  38.1 
 
 
405 aa  134  3e-30  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  44.03 
 
 
348 aa  133  3.9999999999999996e-30  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0079  metal dependent phosphohydrolase  36.44 
 
 
320 aa  133  6e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  37.69 
 
 
365 aa  133  6e-30  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  42.94 
 
 
378 aa  133  6.999999999999999e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_010511  M446_5359  response regulator receiver modulated metal dependent phosphohydrolase  41.3 
 
 
347 aa  132  9e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0670454 
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  32.71 
 
 
369 aa  132  1.0000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_009943  Dole_1678  putative PAS/PAC sensor protein  38.89 
 
 
625 aa  132  1.0000000000000001e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0321383  n/a   
 
 
-
 
NC_013946  Mrub_2643  metal dependent phosphohydrolase  44.69 
 
 
861 aa  132  1.0000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  0.120686  normal 
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  37.2 
 
 
361 aa  132  1.0000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  35.12 
 
 
432 aa  132  1.0000000000000001e-29  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3640  metal dependent phosphohydrolase  40.1 
 
 
320 aa  132  1.0000000000000001e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  39.5 
 
 
328 aa  132  1.0000000000000001e-29  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_011312  VSAL_I2231  putative metal dependent phosphohydrolase  30.92 
 
 
440 aa  131  2.0000000000000002e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3371  putative PAS/PAC sensor protein  41.76 
 
 
649 aa  131  2.0000000000000002e-29  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00785192 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  34.98 
 
 
371 aa  130  3e-29  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4135  putative PAS/PAC sensor protein  36.17 
 
 
650 aa  130  4.0000000000000003e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.479739  hitchhiker  0.00000143987 
 
 
-
 
NC_004347  SO_1387  HD domain-containing protein  31.76 
 
 
422 aa  130  4.0000000000000003e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  39.25 
 
 
364 aa  130  4.0000000000000003e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  32.32 
 
 
365 aa  130  5.0000000000000004e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_013216  Dtox_2814  putative PAS/PAC sensor protein  39.89 
 
 
1335 aa  130  6e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.988399 
 
 
-
 
NC_008025  Dgeo_1999  metal dependent phosphohydrolase  41.85 
 
 
1237 aa  130  6e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.974875 
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
359 aa  129  6e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  37.11 
 
 
359 aa  129  7.000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  48.67 
 
 
353 aa  129  7.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  36.45 
 
 
350 aa  129  8.000000000000001e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  38.07 
 
 
364 aa  129  9.000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  32.06 
 
 
383 aa  129  1.0000000000000001e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  37.56 
 
 
353 aa  129  1.0000000000000001e-28  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_013552  DhcVS_1406  response regulator  36.79 
 
 
351 aa  128  1.0000000000000001e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1882  metal dependent phosphohydrolase  36.62 
 
 
428 aa  129  1.0000000000000001e-28  Shewanella loihica PV-4  Bacteria  normal  normal  0.898808 
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  35.34 
 
 
531 aa  129  1.0000000000000001e-28  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  33.76 
 
 
331 aa  128  2.0000000000000002e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  33.76 
 
 
331 aa  128  2.0000000000000002e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0523  Response regulator protein  41.67 
 
 
359 aa  127  2.0000000000000002e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008741  Dvul_3024  response regulator receiver modulated metal dependent phosphohydrolase  39.3 
 
 
363 aa  127  2.0000000000000002e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.433593  n/a   
 
 
-
 
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