More than 300 homologs were found in PanDaTox collection
for query gene LACR_0174 on replicon NC_008527
Organism: Lactococcus lactis subsp. cremoris SK11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008527  LACR_0174  cold-shock DNA-binding protein family protein  100 
 
 
65 aa  132  9.999999999999999e-31  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.0000215085  n/a   
 
 
-
 
NC_008505  LACR_C47  cold-shock DNA-binding protein family protein  86.15 
 
 
66 aa  116  9.999999999999999e-26  Lactococcus lactis subsp. cremoris SK11  Bacteria  n/a    n/a   
 
 
-
 
NC_008532  STER_0880  cold shock protein  80 
 
 
66 aa  110  9e-24  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000035682  n/a   
 
 
-
 
NC_008527  LACR_0756  cold-shock DNA-binding protein family protein  81.54 
 
 
66 aa  110  1.0000000000000001e-23  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.000688666  n/a   
 
 
-
 
NC_008528  OEOE_1376  cold-shock DNA-binding protein family protein  76.92 
 
 
67 aa  107  8.000000000000001e-23  Oenococcus oeni PSU-1  Bacteria  normal  0.128629  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3598  cold-shock DNA-binding domain-containing protein  75.38 
 
 
66 aa  103  9e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.851035  n/a   
 
 
-
 
NC_013522  Taci_0387  cold-shock DNA-binding domain protein  71.43 
 
 
67 aa  103  9e-22  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  unclonable  0.000000000327706  n/a   
 
 
-
 
NC_004116  SAG2100  CSD family cold shock protein  74.6 
 
 
67 aa  103  1e-21  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2197  cold-shock DNA-binding domain protein  69.23 
 
 
66 aa  101  4e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.000000106738  n/a   
 
 
-
 
NC_009513  Lreu_1505  cold-shock DNA-binding protein family protein  73.85 
 
 
66 aa  100  8e-21  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.248091  n/a   
 
 
-
 
NC_011772  BCG9842_B1369  hypothetical protein  72.31 
 
 
66 aa  100  1e-20  Bacillus cereus G9842  Bacteria  normal  normal  0.309276 
 
 
-
 
NC_013522  Taci_0982  cold-shock DNA-binding domain protein  70.97 
 
 
83 aa  100  1e-20  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  unclonable  0.000000000734957  n/a   
 
 
-
 
NC_008531  LEUM_1878  cold-shock DNA-binding protein family protein  75.38 
 
 
66 aa  99.8  1e-20  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4269  cold-shock DNA-binding protein family protein  70.77 
 
 
67 aa  97.8  5e-20  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3242  cold-shock DNA-binding domain-containing protein  70.77 
 
 
66 aa  97.4  5e-20  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.0000000134861  n/a   
 
 
-
 
NC_011658  BCAH187_A5356  cold shock protein CspC  69.84 
 
 
67 aa  97.4  6e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5298  cold shock protein CspC  69.84 
 
 
67 aa  97.4  6e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2963  cold-shock DNA-binding domain protein  73.02 
 
 
65 aa  97.1  7e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3245  cold-shock DNA-binding domain-containing protein  76.19 
 
 
65 aa  96.7  9e-20  Desulfotomaculum reducens MI-1  Bacteria  normal  0.370321  n/a   
 
 
-
 
NC_009632  SaurJH1_2784  cold-shock protein DNA-binding  70.31 
 
 
66 aa  96.3  1e-19  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5040  cold shock protein CspC  68.25 
 
 
67 aa  96.3  1e-19  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4985  cold-shock DNA-binding domain-containing protein  68.25 
 
 
67 aa  96.3  1e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4870  cold shock protein  68.25 
 
 
67 aa  96.3  1e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2221  cold-shock DNA-binding domain-containing protein  70.77 
 
 
66 aa  95.9  1e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000348612  n/a   
 
 
-
 
NC_006274  BCZK4885  cold shock protein  68.25 
 
 
67 aa  96.3  1e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0644  cold-shock DNA-binding domain-containing protein  66.15 
 
 
66 aa  96.7  1e-19  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000000253244  n/a   
 
 
-
 
NC_011773  BCAH820_5280  cold shock protein CspC  68.25 
 
 
67 aa  96.3  1e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000584465 
 
 
-
 
NC_007517  Gmet_1266  cold-shock DNA-binding protein family protein  70.77 
 
 
66 aa  96.3  1e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  2.7573e-18  decreased coverage  0.00000000000100442 
 
 
-
 
NC_009487  SaurJH9_2727  cold-shock DNA-binding domain-containing protein  70.31 
 
 
66 aa  96.3  1e-19  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3557  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus cereus AH187  Bacteria  unclonable  0.000000000616269  n/a   
 
 
-
 
NC_011886  Achl_1131  cold-shock DNA-binding domain protein  66.15 
 
 
67 aa  95.5  2e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.294478 
 
 
-
 
NC_011725  BCB4264_A3647  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus cereus B4264  Bacteria  unclonable  0.00000702498  n/a   
 
 
-
 
NC_003909  BCE_3553  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000960966  n/a   
 
 
-
 
NC_005945  BAS3333  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus anthracis str. Sterne  Bacteria  unclonable  0.0000000000000736097  n/a   
 
 
-
 
NC_005957  BT9727_3297  cold shock protein  69.23 
 
 
66 aa  95.9  2e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.0310600000000001e-23  n/a   
 
 
-
 
NC_006274  BCZK3248  cold shock protein  69.23 
 
 
66 aa  95.9  2e-19  Bacillus cereus E33L  Bacteria  unclonable  0.0000000000000222014  n/a   
 
 
-
 
NC_013757  Gobs_0782  cold-shock DNA-binding domain protein  71.67 
 
 
66 aa  95.9  2e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.733249  n/a   
 
 
-
 
NC_009674  Bcer98_3728  cold-shock DNA-binding domain-containing protein  68.25 
 
 
65 aa  95.5  2e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.484525  n/a   
 
 
-
 
NC_007498  Pcar_2806  cold shock proteins  67.69 
 
 
85 aa  95.9  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  5.72104e-21  n/a   
 
 
-
 
NC_013521  Sked_02480  cold-shock DNA-binding protein family  67.69 
 
 
67 aa  95.9  2e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_007530  GBAA_3594  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000000000000632893  n/a   
 
 
-
 
NC_007530  GBAA_5424  cold shock protein CspC  68.25 
 
 
65 aa  95.9  2e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.491326  n/a   
 
 
-
 
NC_010814  Glov_3186  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  95.9  2e-19  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000014796  n/a   
 
 
-
 
NC_011773  BCAH820_3548  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus cereus AH820  Bacteria  n/a    decreased coverage  4.8624399999999996e-45 
 
 
-
 
NC_011772  BCG9842_B1670  cold shock protein CspB  69.23 
 
 
66 aa  95.9  2e-19  Bacillus cereus G9842  Bacteria  unclonable  0.000000000143673  decreased coverage  2.4479999999999998e-23 
 
 
-
 
NC_011725  BCB4264_A5310  cold shock protein CspC  68.25 
 
 
65 aa  95.9  2e-19  Bacillus cereus B4264  Bacteria  normal  0.156889  n/a   
 
 
-
 
NC_011772  BCG9842_B5647  cold shock protein CspC  68.25 
 
 
65 aa  95.9  2e-19  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000135799 
 
 
-
 
NC_009253  Dred_0036  cold-shock DNA-binding domain-containing protein  69.23 
 
 
66 aa  95.9  2e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0614  cold shock-like protein  73.44 
 
 
69 aa  95.1  3e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.099487  n/a   
 
 
-
 
NC_007498  Pcar_0201  cold shock protein  61.54 
 
 
66 aa  95.1  3e-19  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000435671  n/a   
 
 
-
 
NC_007644  Moth_0226  cold-shock DNA-binding protein family protein  69.84 
 
 
65 aa  95.1  3e-19  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000000000017804  normal 
 
 
-
 
NC_007951  Bxe_A0798  cold-shock DNA-binding protein family protein  73.85 
 
 
68 aa  95.1  3e-19  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.0000000000000106482  normal 
 
 
-
 
NC_010681  Bphyt_3167  cold-shock DNA-binding domain protein  73.85 
 
 
68 aa  95.1  3e-19  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000000493488  hitchhiker  0.00220171 
 
 
-
 
NC_009674  Bcer98_1777  cold-shock DNA-binding domain-containing protein  72.58 
 
 
67 aa  95.1  3e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000000555984  n/a   
 
 
-
 
NC_010622  Bphy_0567  cold-shock DNA-binding domain-containing protein  72.31 
 
 
68 aa  94.7  4e-19  Burkholderia phymatum STM815  Bacteria  unclonable  0.0000000000101913  hitchhiker  0.000143899 
 
 
-
 
NC_007404  Tbd_0855  cold-shock DNA-binding protein family protein  72.31 
 
 
68 aa  94.4  4e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.563444  normal  0.445485 
 
 
-
 
NC_011879  Achl_4023  cold-shock DNA-binding domain protein  67.69 
 
 
67 aa  94.7  4e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00477592 
 
 
-
 
NC_011898  Ccel_2901  cold-shock DNA-binding domain protein  66.15 
 
 
66 aa  94.7  4e-19  Clostridium cellulolyticum H10  Bacteria  unclonable  0.0000000000581473  n/a   
 
 
-
 
NC_009632  SaurJH1_0833  cold-shock protein DNA-binding  67.69 
 
 
66 aa  94.7  4e-19  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000000457197  n/a   
 
 
-
 
NC_009487  SaurJH9_0817  cold-shock DNA-binding domain-containing protein  67.69 
 
 
66 aa  94.7  4e-19  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.000000123312  n/a   
 
 
-
 
NC_011772  BCG9842_B2944  cold shock protein CspA  70.97 
 
 
67 aa  94.4  5e-19  Bacillus cereus G9842  Bacteria  decreased coverage  0.00000000190383  hitchhiker  0.00000000328218 
 
 
-
 
NC_008554  Sfum_3214  cold-shock DNA-binding domain-containing protein  61.54 
 
 
67 aa  94.4  5e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0979697  normal 
 
 
-
 
NC_007298  Daro_1388  cold-shock DNA-binding protein family protein  72.31 
 
 
67 aa  94.4  5e-19  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.0000000000000202704  normal  0.239262 
 
 
-
 
NC_007298  Daro_3093  cold-shock DNA-binding protein family protein  70.77 
 
 
72 aa  94.4  5e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.475725  normal 
 
 
-
 
NC_009632  SaurJH1_1492  cold-shock protein DNA-binding  69.23 
 
 
66 aa  94.4  5e-19  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.0000192979  n/a   
 
 
-
 
NC_011725  BCB4264_A2387  cold shock protein CspA  70.97 
 
 
67 aa  94.4  5e-19  Bacillus cereus B4264  Bacteria  hitchhiker  0.000343372  n/a   
 
 
-
 
NC_009487  SaurJH9_1463  cold-shock DNA-binding domain-containing protein  69.23 
 
 
66 aa  94.4  5e-19  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302037  n/a   
 
 
-
 
NC_003909  BCE_5019  cold shock protein CspD  67.69 
 
 
66 aa  94  6e-19  Bacillus cereus ATCC 10987  Bacteria  normal  0.0351296  n/a   
 
 
-
 
NC_013216  Dtox_3973  cold-shock DNA-binding domain protein  67.74 
 
 
65 aa  94  6e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000000342931  unclonable  0.0000000000681945 
 
 
-
 
NC_005945  BAS4754  cold shock protein CspD  67.69 
 
 
66 aa  94  6e-19  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000181  n/a   
 
 
-
 
NC_011773  BCAH820_4972  cold shock protein CspD  67.69 
 
 
66 aa  94  6e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_4592  cold shock protein  67.69 
 
 
66 aa  94  6e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000000232551  n/a   
 
 
-
 
NC_006274  BCZK4614  cold shock protein  67.69 
 
 
66 aa  94  6e-19  Bacillus cereus E33L  Bacteria  unclonable  0.0000000000000169422  n/a   
 
 
-
 
NC_011658  BCAH187_A5001  cold shock protein CspD  67.69 
 
 
66 aa  94  6e-19  Bacillus cereus AH187  Bacteria  normal  0.219986  n/a   
 
 
-
 
NC_009674  Bcer98_3497  cold-shock DNA-binding domain-containing protein  66.15 
 
 
66 aa  94  6e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.000000616798  n/a   
 
 
-
 
NC_007530  GBAA_5115  cold shock protein CspD  67.69 
 
 
66 aa  94  6e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00303936  n/a   
 
 
-
 
NC_011725  BCB4264_A4990  cold shock protein CspD  67.69 
 
 
66 aa  94  6e-19  Bacillus cereus B4264  Bacteria  hitchhiker  0.00510931  n/a   
 
 
-
 
NC_008541  Arth_0472  cold-shock DNA-binding protein family protein  67.69 
 
 
67 aa  94  6e-19  Arthrobacter sp. FB24  Bacteria  normal  0.16014  n/a   
 
 
-
 
NC_009483  Gura_3670  cold-shock DNA-binding domain-containing protein  66.15 
 
 
66 aa  94  7e-19  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000254143  n/a   
 
 
-
 
NC_012793  GWCH70_1817  cold-shock DNA-binding domain protein  66.15 
 
 
66 aa  94  7e-19  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.0000000002542  n/a   
 
 
-
 
NC_011658  BCAH187_A2521  cold shock protein CspA  70.97 
 
 
67 aa  93.6  8e-19  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000175758  n/a   
 
 
-
 
NC_003909  BCE_2454  cold shock protein CspA  70.97 
 
 
67 aa  93.6  8e-19  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.0000000020427  n/a   
 
 
-
 
NC_005945  BAS2257  cold shock protein CspA  70.97 
 
 
67 aa  93.6  8e-19  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000681816  n/a   
 
 
-
 
NC_005957  BT9727_2216  cold shock protein  70.97 
 
 
67 aa  93.6  8e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  9.62754e-25  n/a   
 
 
-
 
NC_006274  BCZK2177  cold shock protein  70.97 
 
 
67 aa  93.6  8e-19  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000000000147175  n/a   
 
 
-
 
NC_011773  BCAH820_2440  cold shock protein CspA  70.97 
 
 
67 aa  93.6  8e-19  Bacillus cereus AH820  Bacteria  n/a    normal  0.11145 
 
 
-
 
NC_007530  GBAA_2422  cold shock protein CspA  70.97 
 
 
67 aa  93.6  8e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000000000271714  n/a   
 
 
-
 
NC_007614  Nmul_A2246  cold-shock DNA-binding domain-containing protein  70.77 
 
 
67 aa  93.6  8e-19  Nitrosospira multiformis ATCC 25196  Bacteria  decreased coverage  0.000000157436  n/a   
 
 
-
 
NC_011146  Gbem_0208  cold-shock DNA-binding domain protein  66.15 
 
 
66 aa  93.6  8e-19  Geobacter bemidjiensis Bem  Bacteria  unclonable  0.000000000807689  n/a   
 
 
-
 
NC_008541  Arth_1055  cold-shock DNA-binding protein family protein  64.62 
 
 
67 aa  93.6  8e-19  Arthrobacter sp. FB24  Bacteria  normal  0.481948  n/a   
 
 
-
 
NC_009253  Dred_3080  cold-shock DNA-binding domain-containing protein  69.35 
 
 
65 aa  93.6  9e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000000356634  n/a   
 
 
-
 
NC_002976  SERP0972  CSD family cold shock protein  67.69 
 
 
77 aa  93.2  1e-18  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2466  cold shock-like transcription regulator protein  69.23 
 
 
67 aa  93.2  1e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.4868  normal 
 
 
-
 
NC_013947  Snas_6113  cold-shock DNA-binding domain-containing protein  59.38 
 
 
66 aa  93.2  1e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1732  cold-shock DNA-binding domain-containing protein  66.13 
 
 
66 aa  92.8  1e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.0000000000101176  n/a   
 
 
-
 
NC_011886  Achl_0641  cold-shock DNA-binding domain protein  66.15 
 
 
67 aa  93.2  1e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_1374  cold-shock DNA-binding domain protein  72.31 
 
 
67 aa  92.8  1e-18  Thauera sp. MZ1T  Bacteria  normal  0.287556  n/a   
 
 
-
 
NC_013530  Xcel_0103  cold-shock DNA-binding domain protein  66.15 
 
 
67 aa  92.8  1e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2140  cold-shock DNA-binding protein family protein  68.18 
 
 
67 aa  92.8  1e-18  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.000000000648799  normal 
 
 
-
 
NC_011772  BCG9842_B0248  cold shock protein CspD  67.69 
 
 
66 aa  92.8  1e-18  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000599312  normal 
 
 
-
 
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