More than 300 homologs were found in PanDaTox collection
for query gene Ksed_21520 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_21520  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  100 
 
 
222 aa  443  1.0000000000000001e-124  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0794896  hitchhiker  0.0000630157 
 
 
-
 
NC_013757  Gobs_4693  two component transcriptional regulator, winged helix family  58.37 
 
 
220 aa  258  4e-68  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4258  response regulator receiver  59.91 
 
 
220 aa  256  2e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0567705  n/a   
 
 
-
 
NC_014210  Ndas_4793  two component transcriptional regulator, winged helix family  60.18 
 
 
219 aa  252  4.0000000000000004e-66  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.732153 
 
 
-
 
NC_013159  Svir_31270  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  57.21 
 
 
221 aa  249  3e-65  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.014564  normal  0.249814 
 
 
-
 
NC_007413  Ava_2440  two component transcriptional regulator  54.95 
 
 
222 aa  245  3e-64  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0936231  normal 
 
 
-
 
NC_011884  Cyan7425_1566  two component transcriptional regulator, winged helix family  53.6 
 
 
228 aa  243  1.9999999999999999e-63  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00435599 
 
 
-
 
NC_007333  Tfu_1330  response regulator receiver  55.2 
 
 
219 aa  241  6e-63  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2006  response regulator receiver  60.63 
 
 
223 aa  236  3e-61  Nocardioides sp. JS614  Bacteria  normal  0.379718  n/a   
 
 
-
 
NC_009921  Franean1_5704  two component transcriptional regulator  57.99 
 
 
220 aa  228  4e-59  Frankia sp. EAN1pec  Bacteria  normal  0.0158381  normal 
 
 
-
 
NC_012669  Bcav_3167  two component transcriptional regulator, winged helix family  57.47 
 
 
218 aa  223  2e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.436774  normal  0.0676898 
 
 
-
 
NC_009664  Krad_2802  two component transcriptional regulator, winged helix family  53.39 
 
 
220 aa  216  2e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232869  normal 
 
 
-
 
NC_011726  PCC8801_3524  two component transcriptional regulator, winged helix family  50.68 
 
 
223 aa  213  1.9999999999999998e-54  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_4900  two component transcriptional regulator, winged helix family  56.11 
 
 
221 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.196174  normal 
 
 
-
 
NC_013093  Amir_4935  two component transcriptional regulator, winged helix family  57.47 
 
 
221 aa  213  1.9999999999999998e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2593  two component transcriptional regulator, winged helix family  50.68 
 
 
223 aa  212  2.9999999999999995e-54  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4549  two component transcriptional regulator, winged helix family  52.29 
 
 
221 aa  212  3.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.703481  normal 
 
 
-
 
NC_008726  Mvan_2389  two component transcriptional regulator  50.68 
 
 
219 aa  209  2e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.753035  normal  0.0318145 
 
 
-
 
NC_013172  Bfae_02960  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.78 
 
 
229 aa  205  5e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2685  two component transcriptional regulator, winged helix family  54.75 
 
 
224 aa  203  2e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3998  two component transcriptional regulator  48.42 
 
 
220 aa  197  1.0000000000000001e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.278973  normal  0.137181 
 
 
-
 
NC_011886  Achl_2869  two component transcriptional regulator, winged helix family  49.77 
 
 
232 aa  194  7e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0187  two component transcriptional regulator  49.33 
 
 
227 aa  187  7e-47  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0604  two component transcriptional regulator  43.61 
 
 
227 aa  187  1e-46  Shewanella baltica OS185  Bacteria  decreased coverage  0.00704602  n/a   
 
 
-
 
NC_009997  Sbal195_0632  two component transcriptional regulator  43.61 
 
 
227 aa  187  1e-46  Shewanella baltica OS195  Bacteria  normal  0.157641  normal 
 
 
-
 
NC_014248  Aazo_2223  winged helix family two component transcriptional regulator  42.41 
 
 
229 aa  186  3e-46  'Nostoc azollae' 0708  Bacteria  normal  0.335669  n/a   
 
 
-
 
NC_011831  Cagg_1351  two component transcriptional regulator, winged helix family  45.13 
 
 
225 aa  184  1.0000000000000001e-45  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00188361  unclonable  0.0000000206018 
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  43.3 
 
 
224 aa  183  2.0000000000000003e-45  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  44.64 
 
 
228 aa  183  2.0000000000000003e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_013739  Cwoe_4710  two component transcriptional regulator, winged helix family  49.33 
 
 
224 aa  182  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01884  predicted DNA-binding response regulator in two-component system with YedV  42.15 
 
 
223 aa  182  3e-45  Escherichia coli BL21(DE3)  Bacteria  unclonable  0.000000533293  n/a   
 
 
-
 
NC_011353  ECH74115_2748  transcriptional regulatory protein YedW  42.15 
 
 
233 aa  182  3e-45  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00000892088  normal  0.227347 
 
 
-
 
NC_009801  EcE24377A_2200  transcriptional regulatory protein YedW  42.34 
 
 
260 aa  182  3e-45  Escherichia coli E24377A  Bacteria  decreased coverage  0.0000000000454941  n/a   
 
 
-
 
NC_010658  SbBS512_E0914  transcriptional regulatory protein YedW  42.34 
 
 
260 aa  182  3e-45  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.0000000013212  n/a   
 
 
-
 
NC_010468  EcolC_1676  transcriptional regulatory protein YedW  42.34 
 
 
260 aa  182  3e-45  Escherichia coli ATCC 8739  Bacteria  decreased coverage  0.000000350308  normal  0.20506 
 
 
-
 
NC_009800  EcHS_A2070  transcriptional regulatory protein YedW  42.34 
 
 
260 aa  182  3e-45  Escherichia coli HS  Bacteria  hitchhiker  3.15395e-18  n/a   
 
 
-
 
NC_012892  B21_01874  hypothetical protein  42.15 
 
 
223 aa  182  3e-45  Escherichia coli BL21  Bacteria  unclonable  0.00000061937  n/a   
 
 
-
 
NC_010498  EcSMS35_1216  transcriptional regulatory protein YedW  42.34 
 
 
260 aa  182  3e-45  Escherichia coli SMS-3-5  Bacteria  decreased coverage  0.000000203871  normal  0.637592 
 
 
-
 
CP001637  EcDH1_1682  two component heavy metal response transcriptional regulator, winged helix family  42.34 
 
 
260 aa  182  5.0000000000000004e-45  Escherichia coli DH1  Bacteria  decreased coverage  0.000000000000361446  n/a   
 
 
-
 
NC_013174  Jden_2344  two component transcriptional regulator, winged helix family  48.88 
 
 
227 aa  181  6e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2231  two component transcriptional regulator, winged helix family  47.27 
 
 
226 aa  180  1e-44  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3002  two component transcriptional regulator  43.75 
 
 
230 aa  181  1e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  0.67465  normal  0.369251 
 
 
-
 
NC_007498  Pcar_3081  two component signal transduction response regulator  42.53 
 
 
223 aa  179  2e-44  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0227  two component transcriptional regulator, winged helix family  43.64 
 
 
224 aa  179  2e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_2725  two component heavy metal response transcriptional regulator  44.55 
 
 
227 aa  179  2.9999999999999997e-44  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0243  two component transcriptional regulator, winged helix family  43.64 
 
 
224 aa  179  2.9999999999999997e-44  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000226454  n/a   
 
 
-
 
NC_011992  Dtpsy_2201  two component heavy metal response transcriptional regulator, winged helix family  44.55 
 
 
227 aa  179  2.9999999999999997e-44  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3411  two component transcriptional regulator, winged helix family  44.64 
 
 
224 aa  179  2.9999999999999997e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.591115  normal 
 
 
-
 
NC_013739  Cwoe_0293  two component transcriptional regulator, winged helix family  45.98 
 
 
226 aa  178  4.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.591061  normal  0.658536 
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  41.63 
 
 
226 aa  178  4.999999999999999e-44  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_008573  Shewana3_4296  DNA-binding transcriptional activator CusR  44.09 
 
 
226 aa  178  4.999999999999999e-44  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.0000252174  normal 
 
 
-
 
NC_011205  SeD_A1171  transcriptional regulatory protein YedW  44.39 
 
 
226 aa  178  5.999999999999999e-44  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1191  transcriptional regulatory protein YedW  44.39 
 
 
226 aa  178  5.999999999999999e-44  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  42.27 
 
 
224 aa  178  7e-44  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_010676  Bphyt_5224  two component heavy metal response transcriptional regulator, winged helix family  43.89 
 
 
225 aa  177  8e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.57611  normal 
 
 
-
 
NC_007413  Ava_3453  two component transcriptional regulator  40.18 
 
 
224 aa  177  8e-44  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  41.7 
 
 
224 aa  177  8e-44  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1055  transcriptional regulatory protein YedW  44.39 
 
 
226 aa  177  8e-44  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1160  transcriptional regulatory protein YedW  44.39 
 
 
226 aa  177  8e-44  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.728212 
 
 
-
 
NC_005945  BAS2056  DNA-binding response regulator  42.08 
 
 
227 aa  177  1e-43  Bacillus anthracis str. Sterne  Bacteria  normal  0.413172  n/a   
 
 
-
 
NC_007530  GBAA_2212  DNA-binding response regulator  42.08 
 
 
227 aa  177  1e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0851  two component transcriptional regulator  40.18 
 
 
222 aa  177  1e-43  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2240  DNA-binding response regulator  42.08 
 
 
227 aa  177  1e-43  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.85177e-28 
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  41.26 
 
 
224 aa  177  2e-43  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_009438  Sputcn32_0258  DNA-binding transcriptional activator CusR  43.64 
 
 
226 aa  176  3e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2264  two component transcriptional regulator, winged helix family  44.59 
 
 
231 aa  176  3e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00910741  n/a   
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  43.95 
 
 
236 aa  175  4e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_009654  Mmwyl1_0419  two component transcriptional regulator  41.26 
 
 
229 aa  175  4e-43  Marinomonas sp. MWYL1  Bacteria  normal  0.509677  normal 
 
 
-
 
NC_007952  Bxe_B1389  two component heavy metal response transcriptional regulator  43.89 
 
 
225 aa  176  4e-43  Burkholderia xenovorans LB400  Bacteria  normal  0.717226  normal  0.091392 
 
 
-
 
NC_007492  Pfl01_3855  two component heavy metal response transcriptional regulator  41.18 
 
 
226 aa  175  5e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.845216 
 
 
-
 
NC_008531  LEUM_1732  DNA-binding response regulator  41.3 
 
 
229 aa  175  5e-43  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.019008  n/a   
 
 
-
 
NC_008825  Mpe_A1629  two-component response regulator  43.64 
 
 
228 aa  175  6e-43  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.128663 
 
 
-
 
NC_010571  Oter_1727  two component transcriptional regulator  41.44 
 
 
228 aa  174  8e-43  Opitutus terrae PB90-1  Bacteria  normal  0.284746  normal 
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  44.69 
 
 
224 aa  174  8e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal 
 
 
-
 
NC_014248  Aazo_0389  winged helix family two component transcriptional regulator  42.04 
 
 
224 aa  174  9.999999999999999e-43  'Nostoc azollae' 0708  Bacteria  normal  0.667669  n/a   
 
 
-
 
NC_011725  BCB4264_A2194  DNA-binding response regulator  41.36 
 
 
227 aa  174  9.999999999999999e-43  Bacillus cereus B4264  Bacteria  hitchhiker  0.00702475  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  40.62 
 
 
240 aa  174  9.999999999999999e-43  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal 
 
 
-
 
NC_010184  BcerKBAB4_2492  two component transcriptional regulator  42.22 
 
 
224 aa  174  9.999999999999999e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.22217  n/a   
 
 
-
 
NC_008463  PA14_27810  putative two-component response regulator  41.63 
 
 
226 aa  174  9.999999999999999e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  40.62 
 
 
225 aa  173  1.9999999999999998e-42  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2348  putative two-component response regulator  42.08 
 
 
228 aa  173  1.9999999999999998e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_009092  Shew_3258  two component heavy metal response transcriptional regulator  40.99 
 
 
238 aa  173  1.9999999999999998e-42  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00206307  normal  0.0675777 
 
 
-
 
NC_011138  MADE_03339  Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain  44.39 
 
 
226 aa  173  1.9999999999999998e-42  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2158  two component heavy metal response transcriptional regulator  42.08 
 
 
226 aa  172  2.9999999999999996e-42  Pseudomonas putida KT2440  Bacteria  normal  0.144347  normal  0.036827 
 
 
-
 
NC_004578  PSPTO_0378  DNA-binding heavy metal response regulator  42.53 
 
 
224 aa  172  2.9999999999999996e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4800  heavy metal response regulator  42.53 
 
 
224 aa  172  2.9999999999999996e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00185939 
 
 
-
 
NC_010468  EcolC_3426  DNA-binding transcriptional activator CusR  42.99 
 
 
226 aa  172  2.9999999999999996e-42  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  44.25 
 
 
224 aa  172  2.9999999999999996e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2673  DNA-binding response regulator  40.36 
 
 
224 aa  172  2.9999999999999996e-42  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2675  DNA-binding response regulator  40.81 
 
 
224 aa  172  3.9999999999999995e-42  Bacillus cereus ATCC 10987  Bacteria  normal  0.0180828  n/a   
 
 
-
 
NC_008391  Bamb_5186  two component heavy metal response transcriptional regulator  41.63 
 
 
223 aa  172  3.9999999999999995e-42  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2259  two component heavy metal response transcriptional regulator  42.99 
 
 
225 aa  171  5.999999999999999e-42  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3962  two component heavy metal response transcriptional regulator  42.99 
 
 
225 aa  171  6.999999999999999e-42  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3584  two component heavy metal response transcriptional regulator  42.08 
 
 
226 aa  171  7.999999999999999e-42  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3349  two component heavy metal response transcriptional regulator  42.08 
 
 
223 aa  171  7.999999999999999e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1748a  hypothetical protein  42.41 
 
 
223 aa  171  7.999999999999999e-42  Burkholderia xenovorans LB400  Bacteria  normal  0.0697031  normal  0.305387 
 
 
-
 
NC_007404  Tbd_1749  two component heavy metal response transcriptional regulator  44.8 
 
 
242 aa  171  9e-42  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0655  two component response regulator transcription regulator protein  42.08 
 
 
228 aa  170  1e-41  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.81937 
 
 
-
 
NC_009512  Pput_3039  two component transcriptional regulator  41.2 
 
 
220 aa  170  1e-41  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_2157  two component transcriptional regulator, winged helix family  43.61 
 
 
226 aa  171  1e-41  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
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