More than 300 homologs were found in PanDaTox collection
for query gene Ksed_08470 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
394 aa  790    Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  51.23 
 
 
407 aa  275  1.0000000000000001e-72  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  49.65 
 
 
320 aa  263  3e-69  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  50.17 
 
 
336 aa  252  8.000000000000001e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  47.89 
 
 
404 aa  246  4.9999999999999997e-64  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  50 
 
 
307 aa  241  1e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  45.99 
 
 
409 aa  242  1e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  50.39 
 
 
466 aa  239  5e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  46.05 
 
 
404 aa  238  2e-61  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  46.9 
 
 
326 aa  236  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  50.35 
 
 
424 aa  235  9e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  43.14 
 
 
463 aa  235  1.0000000000000001e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  45.39 
 
 
306 aa  227  3e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  43.09 
 
 
307 aa  226  6e-58  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  47.4 
 
 
311 aa  224  2e-57  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  47.4 
 
 
311 aa  223  4e-57  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  47.4 
 
 
311 aa  223  4e-57  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  37.78 
 
 
393 aa  206  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  42.19 
 
 
296 aa  195  1e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  41.42 
 
 
434 aa  195  2e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  40.83 
 
 
313 aa  188  2e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  38.51 
 
 
497 aa  184  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  36.76 
 
 
434 aa  183  5.0000000000000004e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  40.49 
 
 
363 aa  178  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  39.55 
 
 
509 aa  175  1.9999999999999998e-42  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  39.03 
 
 
489 aa  173  3.9999999999999995e-42  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  40.28 
 
 
303 aa  171  1e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  42.19 
 
 
504 aa  172  1e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  35.62 
 
 
486 aa  164  2.0000000000000002e-39  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  38.61 
 
 
505 aa  160  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  38.13 
 
 
390 aa  152  8.999999999999999e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  36.08 
 
 
512 aa  152  1e-35  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.87 
 
 
549 aa  149  6e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  32.31 
 
 
453 aa  149  9e-35  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  31.97 
 
 
522 aa  149  9e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  36.16 
 
 
420 aa  149  1.0000000000000001e-34  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  37.07 
 
 
521 aa  145  8.000000000000001e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  34.67 
 
 
625 aa  145  2e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  32.79 
 
 
567 aa  145  2e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  32.33 
 
 
530 aa  144  4e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  34.7 
 
 
414 aa  142  7e-33  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  32.06 
 
 
676 aa  141  1.9999999999999998e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  33.33 
 
 
432 aa  140  3e-32  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  37.96 
 
 
573 aa  139  7e-32  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  35.44 
 
 
349 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  31.56 
 
 
732 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  31.82 
 
 
584 aa  138  2e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  35.37 
 
 
481 aa  137  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  34.29 
 
 
497 aa  135  9.999999999999999e-31  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  35.06 
 
 
491 aa  135  9.999999999999999e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  33.67 
 
 
410 aa  134  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  31.17 
 
 
493 aa  134  3e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  31.48 
 
 
493 aa  133  6e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  31.06 
 
 
618 aa  132  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  33.94 
 
 
478 aa  131  2.0000000000000002e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  32.9 
 
 
545 aa  132  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  35.45 
 
 
506 aa  130  5.0000000000000004e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  39.34 
 
 
468 aa  129  6e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  32.93 
 
 
382 aa  128  2.0000000000000002e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  40 
 
 
358 aa  127  3e-28  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  34.19 
 
 
490 aa  126  7e-28  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  34.19 
 
 
490 aa  126  7e-28  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  34.19 
 
 
490 aa  125  9e-28  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  34.85 
 
 
538 aa  125  1e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  34.56 
 
 
362 aa  125  1e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  31.79 
 
 
468 aa  123  6e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  31.78 
 
 
465 aa  122  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  27.97 
 
 
560 aa  122  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  35.14 
 
 
480 aa  121  3e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  38.22 
 
 
312 aa  119  7.999999999999999e-26  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  35.96 
 
 
379 aa  119  9e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.92 
 
 
400 aa  119  9.999999999999999e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  36.82 
 
 
377 aa  117  3e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  33.09 
 
 
481 aa  117  3e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  30.93 
 
 
319 aa  117  3.9999999999999997e-25  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  36.82 
 
 
377 aa  116  6.9999999999999995e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  36.82 
 
 
375 aa  115  1.0000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  30.86 
 
 
520 aa  115  1.0000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  36.82 
 
 
375 aa  115  1.0000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  36.82 
 
 
375 aa  115  1.0000000000000001e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  36.82 
 
 
375 aa  115  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2795  cell envelope-related transcriptional attenuator  37.88 
 
 
424 aa  115  1.0000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000153391  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  36.82 
 
 
375 aa  115  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  35.29 
 
 
517 aa  114  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  35.91 
 
 
374 aa  114  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
514 aa  114  4.0000000000000004e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  29.8 
 
 
496 aa  113  6e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  40.7 
 
 
414 aa  113  7.000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  36.36 
 
 
374 aa  112  1.0000000000000001e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  36.36 
 
 
372 aa  112  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  36.32 
 
 
495 aa  111  2.0000000000000002e-23  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  34.18 
 
 
405 aa  111  2.0000000000000002e-23  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  37.68 
 
 
377 aa  111  3e-23  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  40.26 
 
 
304 aa  110  5e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_013124  Afer_1145  cell envelope-related transcriptional attenuator  32.89 
 
 
543 aa  110  5e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  30.83 
 
 
516 aa  110  5e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  33.96 
 
 
516 aa  110  6e-23  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  35.53 
 
 
445 aa  110  6e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  34.44 
 
 
383 aa  109  8.000000000000001e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30.17 
 
 
406 aa  109  8.000000000000001e-23  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
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