More than 300 homologs were found in PanDaTox collection
for query gene Ksed_00990 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
201 aa  385  1e-106  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal 
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  61.81 
 
 
203 aa  210  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  57.71 
 
 
201 aa  205  3e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.8 
 
 
224 aa  205  3e-52  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  56.28 
 
 
204 aa  201  4e-51  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.76 
 
 
211 aa  194  7e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  52.74 
 
 
208 aa  194  7e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.313515 
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  52.24 
 
 
223 aa  193  1e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  57.71 
 
 
201 aa  193  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  56.78 
 
 
205 aa  191  8e-48  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.116105 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  55.22 
 
 
201 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0367887 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  52.74 
 
 
197 aa  186  2e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  54.73 
 
 
201 aa  186  2e-46  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  55.22 
 
 
200 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  43.78 
 
 
200 aa  182  3e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  43.28 
 
 
200 aa  181  8e-45  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  1.02018e-12 
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  43.78 
 
 
200 aa  181  8e-45  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  49.25 
 
 
201 aa  180  1e-44  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  47.83 
 
 
205 aa  180  1e-44  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal 
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  43.28 
 
 
200 aa  179  2e-44  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  49.75 
 
 
201 aa  179  2e-44  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.264232 
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  42.79 
 
 
200 aa  179  3e-44  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  42.79 
 
 
200 aa  179  3e-44  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  42.79 
 
 
200 aa  179  3e-44  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  42.79 
 
 
200 aa  179  3e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  42.79 
 
 
200 aa  178  4e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  50.25 
 
 
201 aa  178  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.226774 
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  42.79 
 
 
200 aa  177  1e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  42.79 
 
 
200 aa  177  1e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  51.01 
 
 
212 aa  175  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  49.26 
 
 
197 aa  175  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  48.24 
 
 
205 aa  173  2e-42  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.75 
 
 
200 aa  170  1e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  45.77 
 
 
200 aa  170  1e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  50 
 
 
204 aa  169  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  49.25 
 
 
202 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  43.72 
 
 
198 aa  169  3e-41  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  50.99 
 
 
201 aa  167  7e-41  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  45.27 
 
 
201 aa  166  2e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  51.24 
 
 
200 aa  164  9e-40  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86401 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  47.78 
 
 
201 aa  163  1e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  41.58 
 
 
205 aa  164  1e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  49.75 
 
 
201 aa  163  2e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.77 
 
 
203 aa  162  2e-39  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  41.71 
 
 
198 aa  162  3e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  1.788e-08 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.74 
 
 
204 aa  162  4e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  47.52 
 
 
202 aa  161  5e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  47.76 
 
 
201 aa  159  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0345388 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  45.89 
 
 
206 aa  160  2e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  46.27 
 
 
227 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  46.77 
 
 
201 aa  159  3e-38  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  45.77 
 
 
201 aa  155  3e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  42.79 
 
 
200 aa  155  5e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  49.75 
 
 
200 aa  154  7e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  47.76 
 
 
202 aa  154  1e-36  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  43.72 
 
 
208 aa  153  1e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  41.38 
 
 
202 aa  151  5e-36  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  46.27 
 
 
200 aa  150  2e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  44.13 
 
 
217 aa  148  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  42.71 
 
 
198 aa  148  6e-35  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  43.22 
 
 
198 aa  148  6e-35  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  43.22 
 
 
198 aa  148  6e-35  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  42.71 
 
 
198 aa  148  6e-35  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  43.22 
 
 
198 aa  148  7e-35  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  6.68977e-08 
 
 
-
 
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  42.71 
 
 
198 aa  147  8e-35  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  43.22 
 
 
198 aa  147  1e-34  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  42.21 
 
 
198 aa  145  4e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  41.83 
 
 
207 aa  145  4e-34  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  48.42 
 
 
190 aa  145  4e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  44.28 
 
 
200 aa  145  5e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  44.28 
 
 
201 aa  143  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.053163 
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  42.71 
 
 
204 aa  142  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  46.77 
 
 
200 aa  140  9e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  48.76 
 
 
201 aa  140  1e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  34.33 
 
 
200 aa  139  2e-32  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  3.20378e-06  n/a   
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  39.8 
 
 
200 aa  140  2e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  37.69 
 
 
200 aa  140  2e-32  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  34.33 
 
 
200 aa  139  2e-32  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  42.93 
 
 
204 aa  138  5e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  39.07 
 
 
221 aa  137  9e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.87 
 
 
222 aa  137  2e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  41.31 
 
 
221 aa  136  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  41.33 
 
 
208 aa  136  3e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  37.21 
 
 
218 aa  135  4e-31  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  41.35 
 
 
214 aa  135  5e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  41.82 
 
 
224 aa  135  5e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  41.55 
 
 
213 aa  134  7e-31  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  40.65 
 
 
220 aa  134  8e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.45 
 
 
216 aa  133  2e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  42.25 
 
 
221 aa  132  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  36.89 
 
 
216 aa  131  6e-30  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  35.98 
 
 
219 aa  130  1e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  38.81 
 
 
219 aa  130  1e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  42.33 
 
 
234 aa  130  2e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  40.36 
 
 
225 aa  129  2e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  42.18 
 
 
230 aa  129  2e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2610  two component transcriptional regulator, LuxR family  51.03 
 
 
144 aa  129  3e-29  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  4.38854e-06  normal  0.0112001 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  36.36 
 
 
216 aa  129  3e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP0889  LuxR family DNA-binding response regulator  29.85 
 
 
200 aa  129  3e-29  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  9.16195e-05  n/a   
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  40.78 
 
 
209 aa  129  4e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
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