More than 300 homologs were found in PanDaTox collection
for query gene Krad_4263 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  100 
 
 
230 aa  457  9.999999999999999e-129  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  63.26 
 
 
219 aa  272  4.0000000000000004e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.83 
 
 
222 aa  268  5e-71  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  63.38 
 
 
215 aa  258  8e-68  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  61.21 
 
 
215 aa  244  8e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  63.72 
 
 
220 aa  243  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  61.57 
 
 
219 aa  242  3e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  58.06 
 
 
228 aa  238  4e-62  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  58.06 
 
 
222 aa  239  4e-62  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  59.24 
 
 
214 aa  238  5.999999999999999e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  58.88 
 
 
227 aa  237  1e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  60.38 
 
 
213 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  57.89 
 
 
241 aa  233  2.0000000000000002e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  55.14 
 
 
215 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  56.02 
 
 
224 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  60.85 
 
 
215 aa  228  8e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  55.14 
 
 
218 aa  227  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.29 
 
 
225 aa  227  1e-58  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  52.47 
 
 
231 aa  226  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  60.47 
 
 
217 aa  225  4e-58  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.36 
 
 
241 aa  225  4e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  56.42 
 
 
232 aa  224  7e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.28 
 
 
230 aa  224  9e-58  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  53.1 
 
 
234 aa  223  2e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.65 
 
 
239 aa  223  2e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.17 
 
 
226 aa  221  6e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  54.17 
 
 
221 aa  220  9.999999999999999e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.55 
 
 
229 aa  220  9.999999999999999e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  56.02 
 
 
222 aa  219  1.9999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  53.11 
 
 
244 aa  220  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  54.63 
 
 
221 aa  219  3.9999999999999997e-56  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  61.4 
 
 
245 aa  219  3.9999999999999997e-56  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  55.35 
 
 
216 aa  219  3.9999999999999997e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.34 
 
 
227 aa  218  5e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  54.55 
 
 
229 aa  218  5e-56  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.83 
 
 
223 aa  218  7.999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.34 
 
 
218 aa  217  1e-55  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.46 
 
 
226 aa  217  1e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.56 
 
 
225 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.78 
 
 
261 aa  217  1e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  55.45 
 
 
225 aa  216  2e-55  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.29 
 
 
227 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  50.66 
 
 
231 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.7 
 
 
223 aa  216  2.9999999999999998e-55  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  52.78 
 
 
222 aa  216  2.9999999999999998e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.75 
 
 
225 aa  215  4e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  54.84 
 
 
221 aa  215  4e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  55.71 
 
 
213 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  51.85 
 
 
221 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  215  5.9999999999999996e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  57.75 
 
 
221 aa  214  7e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  52.73 
 
 
221 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.4 
 
 
221 aa  214  9.999999999999999e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  51.8 
 
 
234 aa  214  9.999999999999999e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.18 
 
 
226 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.95 
 
 
218 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  57.08 
 
 
223 aa  214  9.999999999999999e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  56.62 
 
 
229 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  53.24 
 
 
214 aa  213  1.9999999999999998e-54  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  49.16 
 
 
250 aa  213  1.9999999999999998e-54  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  53.78 
 
 
225 aa  212  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  52.73 
 
 
225 aa  212  2.9999999999999995e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  52.42 
 
 
229 aa  212  2.9999999999999995e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  56.42 
 
 
220 aa  212  3.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  54.38 
 
 
220 aa  212  4.9999999999999996e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  51.38 
 
 
228 aa  211  4.9999999999999996e-54  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  52.11 
 
 
230 aa  211  5.999999999999999e-54  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.78 
 
 
225 aa  211  7e-54  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.93 
 
 
220 aa  210  1e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  52.09 
 
 
215 aa  211  1e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  52.31 
 
 
219 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.61 
 
 
221 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  52.11 
 
 
216 aa  209  2e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  54.38 
 
 
217 aa  209  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  55.3 
 
 
217 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  53.92 
 
 
222 aa  210  2e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  54.08 
 
 
239 aa  209  3e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  49.08 
 
 
225 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  51.83 
 
 
230 aa  209  3e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.9 
 
 
239 aa  208  4e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  54.34 
 
 
225 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.61 
 
 
224 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.8 
 
 
229 aa  208  5e-53  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.49 
 
 
220 aa  208  5e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  50.23 
 
 
228 aa  208  5e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  52.97 
 
 
226 aa  208  7e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  52.78 
 
 
225 aa  207  1e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.87 
 
 
236 aa  207  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.74 
 
 
215 aa  206  2e-52  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  51.03 
 
 
250 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  50 
 
 
228 aa  207  2e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  51.39 
 
 
218 aa  206  3e-52  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  58.02 
 
 
217 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.83 
 
 
247 aa  205  4e-52  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  51.39 
 
 
226 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  53.99 
 
 
218 aa  204  7e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  51.4 
 
 
219 aa  204  7e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  53.95 
 
 
215 aa  204  7e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  52.34 
 
 
216 aa  204  9e-52  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  49.59 
 
 
249 aa  204  9e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
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