More than 300 homologs were found in PanDaTox collection
for query gene Krad_1913 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  100 
 
 
524 aa  1009    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  57.22 
 
 
529 aa  480  1e-134  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  59 
 
 
550 aa  479  1e-134  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  56.55 
 
 
531 aa  445  1e-123  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  53.58 
 
 
530 aa  402  1e-111  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  58.39 
 
 
545 aa  362  1e-98  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  66.24 
 
 
539 aa  288  2e-76  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  50.15 
 
 
518 aa  269  1e-70  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  40.5 
 
 
545 aa  268  2e-70  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  48.79 
 
 
542 aa  252  9.000000000000001e-66  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
522 aa  252  1e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  38.07 
 
 
538 aa  249  7e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  42.36 
 
 
543 aa  247  4e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  37.14 
 
 
532 aa  245  1.9999999999999999e-63  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
538 aa  239  5.999999999999999e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  42.16 
 
 
562 aa  239  1e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
538 aa  239  1e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  51.77 
 
 
523 aa  235  1.0000000000000001e-60  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  47.85 
 
 
545 aa  234  4.0000000000000004e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  41.71 
 
 
540 aa  230  4e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
547 aa  227  4e-58  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
535 aa  227  4e-58  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  52.65 
 
 
538 aa  227  5.0000000000000005e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  42.78 
 
 
531 aa  226  7e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  49.23 
 
 
537 aa  226  8e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  44.51 
 
 
347 aa  225  1e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  37.71 
 
 
533 aa  225  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  48.36 
 
 
858 aa  222  9.999999999999999e-57  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
545 aa  221  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  43.04 
 
 
540 aa  218  2e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  50 
 
 
904 aa  218  2e-55  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  48.4 
 
 
1150 aa  217  4e-55  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  39.25 
 
 
533 aa  216  9.999999999999999e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  47.45 
 
 
538 aa  213  4.9999999999999996e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  46.18 
 
 
535 aa  213  5.999999999999999e-54  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  46.06 
 
 
544 aa  213  5.999999999999999e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
528 aa  213  7e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
546 aa  213  7e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  38.06 
 
 
535 aa  211  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
623 aa  212  2e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
526 aa  210  6e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  44.76 
 
 
540 aa  208  2e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
542 aa  207  3e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
702 aa  207  3e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  43.56 
 
 
407 aa  206  9e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
394 aa  205  2e-51  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
560 aa  204  3e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  35.1 
 
 
540 aa  204  3e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  43.95 
 
 
530 aa  203  8e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
536 aa  202  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.95 
 
 
574 aa  200  3.9999999999999996e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.67 
 
 
574 aa  199  7.999999999999999e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
586 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  33.33 
 
 
566 aa  197  4.0000000000000005e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
554 aa  197  6e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
565 aa  196  8.000000000000001e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.37 
 
 
650 aa  196  9e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  36.47 
 
 
583 aa  196  1e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  46.1 
 
 
544 aa  194  2e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  48.62 
 
 
965 aa  195  2e-48  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
561 aa  194  3e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  32.74 
 
 
561 aa  194  4e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_013173  Dbac_2858  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
687 aa  193  6e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
563 aa  193  8e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  38.63 
 
 
567 aa  192  1e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  35.73 
 
 
656 aa  192  1e-47  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
562 aa  192  2e-47  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
397 aa  191  2.9999999999999997e-47  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  32.83 
 
 
563 aa  191  2.9999999999999997e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  47.55 
 
 
562 aa  189  1e-46  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  37.47 
 
 
656 aa  188  2e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  42.67 
 
 
715 aa  187  4e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  38.75 
 
 
565 aa  187  5e-46  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
563 aa  186  7e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
563 aa  186  7e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
562 aa  186  9e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_013093  Amir_4191  methyl-accepting chemotaxis sensory transducer  46.06 
 
 
538 aa  186  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  35 
 
 
656 aa  186  1.0000000000000001e-45  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5878  methyl-accepting chemotaxis sensory transducer  45.96 
 
 
562 aa  185  2.0000000000000003e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.338132 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
565 aa  185  2.0000000000000003e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
562 aa  184  4.0000000000000006e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  47.24 
 
 
676 aa  184  5.0000000000000004e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  32.1 
 
 
563 aa  183  7e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
657 aa  183  8.000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
686 aa  183  8.000000000000001e-45  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
562 aa  182  1e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  37.7 
 
 
688 aa  182  2e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  31.29 
 
 
562 aa  181  2e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
730 aa  182  2e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3616  chemotaxis sensory transducer  45.91 
 
 
305 aa  182  2e-44  Methylobacterium extorquens PA1  Bacteria  normal  0.460138  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
566 aa  181  2.9999999999999997e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
561 aa  181  4e-44  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  45.08 
 
 
558 aa  180  7e-44  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  42.14 
 
 
670 aa  179  1e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
563 aa  179  1e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
625 aa  179  1e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.96 
 
 
533 aa  179  1e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
730 aa  178  2e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_013173  Dbac_1799  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.71 
 
 
668 aa  178  2e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.481177  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
573 aa  178  2e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>