More than 300 homologs were found in PanDaTox collection
for query gene Krad_1198 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  100 
 
 
225 aa  434  1e-121  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  65.9 
 
 
221 aa  261  5e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  66.51 
 
 
215 aa  253  1e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  63.11 
 
 
225 aa  254  1e-66  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  59.72 
 
 
224 aa  253  2e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  61.23 
 
 
227 aa  248  6e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  59.63 
 
 
218 aa  248  7e-65  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  58.48 
 
 
230 aa  247  1e-64  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  61.01 
 
 
225 aa  246  2e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  58.26 
 
 
225 aa  244  6e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  59.38 
 
 
227 aa  244  8e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  56.72 
 
 
239 aa  244  9e-64  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  60.83 
 
 
225 aa  242  4e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  60.27 
 
 
221 aa  242  4e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  58.04 
 
 
230 aa  241  5e-63  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  61.43 
 
 
228 aa  241  5e-63  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  59.38 
 
 
225 aa  239  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  58.64 
 
 
219 aa  239  3e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  64.19 
 
 
217 aa  238  8e-62  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  57.66 
 
 
227 aa  237  8e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  59.81 
 
 
218 aa  238  8e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  60.44 
 
 
229 aa  237  9e-62  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  55.36 
 
 
231 aa  237  1e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.59 
 
 
226 aa  237  1e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  58.3 
 
 
225 aa  237  1e-61  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  58.64 
 
 
239 aa  237  1e-61  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.55 
 
 
236 aa  236  2e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  59.82 
 
 
241 aa  236  2e-61  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  54.55 
 
 
234 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  60.55 
 
 
220 aa  236  3e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  56.39 
 
 
225 aa  235  4e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  57.41 
 
 
219 aa  235  5e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  55.71 
 
 
221 aa  235  5e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  57.52 
 
 
228 aa  234  7e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  45.35 
 
 
261 aa  234  7e-61  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  56.42 
 
 
218 aa  234  8e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  58.53 
 
 
218 aa  234  9e-61  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.85 
 
 
222 aa  233  1e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.34 
 
 
221 aa  233  1e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.08 
 
 
229 aa  233  1e-60  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  58.82 
 
 
224 aa  233  1e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  57.41 
 
 
214 aa  233  2e-60  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  56.16 
 
 
224 aa  233  3e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  55.5 
 
 
226 aa  232  4e-60  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  56.5 
 
 
220 aa  231  6e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.33 
 
 
261 aa  230  1e-59  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  54.59 
 
 
215 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  58.52 
 
 
249 aa  230  1e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.13 
 
 
224 aa  230  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.01 
 
 
226 aa  229  2e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  57.52 
 
 
234 aa  229  3e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  57.27 
 
 
216 aa  228  4e-59  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  54.15 
 
 
230 aa  229  4e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  58.82 
 
 
217 aa  228  7e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  57.92 
 
 
234 aa  227  9e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  53.04 
 
 
242 aa  227  9e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  55.81 
 
 
213 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.95 
 
 
230 aa  226  1e-58  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  55.25 
 
 
220 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.67 
 
 
221 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  56.48 
 
 
220 aa  226  2e-58  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  56.48 
 
 
219 aa  226  3e-58  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.76 
 
 
222 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  58.18 
 
 
219 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  56.11 
 
 
220 aa  225  5e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  54.46 
 
 
239 aa  225  5e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.39 
 
 
222 aa  223  2e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.05 
 
 
258 aa  223  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.55 
 
 
226 aa  223  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  54.71 
 
 
223 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  55.45 
 
 
221 aa  222  3e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  57.75 
 
 
215 aa  223  3e-57  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  54.5 
 
 
223 aa  222  4e-57  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  56.22 
 
 
217 aa  221  6e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  54.87 
 
 
225 aa  221  6e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.3 
 
 
244 aa  221  8e-57  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  53.67 
 
 
221 aa  221  1e-56  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  54.3 
 
 
230 aa  220  1e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  52.97 
 
 
226 aa  220  1e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.3 
 
 
224 aa  220  2e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  53.1 
 
 
228 aa  219  3e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  54.42 
 
 
213 aa  219  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55 
 
 
220 aa  219  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  55.2 
 
 
232 aa  219  3e-56  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  59.36 
 
 
220 aa  219  3e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.58 
 
 
250 aa  218  6e-56  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  55.81 
 
 
219 aa  218  6e-56  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  55.96 
 
 
222 aa  218  6e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  51.32 
 
 
228 aa  218  7e-56  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  54.59 
 
 
225 aa  218  8e-56  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  55.66 
 
 
225 aa  217  1e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.7 
 
 
226 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  48.41 
 
 
258 aa  216  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  52.02 
 
 
221 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.75 
 
 
230 aa  215  3e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  54.17 
 
 
217 aa  215  4e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  52.05 
 
 
219 aa  215  5e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50.89 
 
 
241 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  47.84 
 
 
233 aa  214  6e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.59 
 
 
247 aa  213  1e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
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