More than 300 homologs were found in PanDaTox collection
for query gene Krad_0973 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_0973  binding-protein-dependent transport systems inner membrane component  100 
 
 
305 aa  595  1e-169  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0279283 
 
 
-
 
NC_014165  Tbis_0068  binding-protein-dependent transporter inner membrane component  73.4 
 
 
308 aa  400  9.999999999999999e-111  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0089  binding-protein-dependent transport systems inner membrane component  66.99 
 
 
312 aa  384  1e-105  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01540  carbohydrate ABC transporter membrane protein  60.98 
 
 
329 aa  353  2e-96  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_23420  carbohydrate ABC transporter membrane protein  59.15 
 
 
310 aa  339  2.9999999999999998e-92  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.93855  normal 
 
 
-
 
NC_013947  Snas_3250  binding-protein-dependent transport systems inner membrane component  58.08 
 
 
294 aa  307  2.0000000000000002e-82  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0540669  normal  0.0518644 
 
 
-
 
NC_007333  Tfu_1618  binding-protein-dependent transport protein  47.48 
 
 
296 aa  248  6e-65  Thermobifida fusca YX  Bacteria  normal  0.14282  n/a   
 
 
-
 
NC_014210  Ndas_2346  binding-protein-dependent transport systems inner membrane component  48.65 
 
 
340 aa  245  4.9999999999999997e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.162139 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  37.05 
 
 
296 aa  180  2.9999999999999997e-44  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
300 aa  164  2.0000000000000002e-39  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
309 aa  159  5e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  34.49 
 
 
350 aa  153  4e-36  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
300 aa  152  8.999999999999999e-36  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
329 aa  150  3e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
294 aa  149  6e-35  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.8 
 
 
310 aa  147  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
306 aa  147  3e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  34.78 
 
 
306 aa  146  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
295 aa  146  4.0000000000000006e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0945  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
309 aa  145  7.0000000000000006e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
320 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
338 aa  143  3e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  33.57 
 
 
322 aa  143  3e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  30.79 
 
 
334 aa  142  5e-33  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
319 aa  142  7e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  33.33 
 
 
320 aa  142  8e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
316 aa  141  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
293 aa  140  1.9999999999999998e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
312 aa  140  3e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
325 aa  140  3e-32  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_008578  Acel_1361  binding-protein-dependent transport systems inner membrane component  31.19 
 
 
315 aa  140  3e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  0.193472  normal  0.165724 
 
 
-
 
NC_010816  BLD_1493  MalF-type ABC sugar transport systems permease component  33.89 
 
 
319 aa  139  3.9999999999999997e-32  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
328 aa  139  3.9999999999999997e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  35.56 
 
 
306 aa  139  7e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
315 aa  139  7e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
317 aa  138  8.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  34.46 
 
 
287 aa  137  3.0000000000000003e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  33.92 
 
 
287 aa  136  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
315 aa  137  3.0000000000000003e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
309 aa  137  3.0000000000000003e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  31.69 
 
 
354 aa  136  4e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  31 
 
 
311 aa  136  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  35.49 
 
 
318 aa  135  8e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
321 aa  134  9.999999999999999e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
330 aa  134  3e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_011899  Hore_04280  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
302 aa  133  3e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
299 aa  133  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  30.06 
 
 
318 aa  133  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
316 aa  133  3.9999999999999996e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_009620  Smed_4016  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
302 aa  132  6.999999999999999e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6970  binding-protein-dependent transport systems inner membrane component  28.53 
 
 
305 aa  132  6.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388505  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  33.84 
 
 
306 aa  132  9e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
311 aa  132  9e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
308 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
312 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
291 aa  130  2.0000000000000002e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_007488  RSP_3942  ABC sugar transporter, inner membrane subunit  30.14 
 
 
321 aa  130  3e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.108149  n/a   
 
 
-
 
NC_007908  Rfer_1100  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
311 aa  130  3e-29  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.0016702  n/a   
 
 
-
 
NC_013411  GYMC61_3365  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
292 aa  130  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
319 aa  130  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
312 aa  129  5.0000000000000004e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
299 aa  129  6e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
306 aa  129  6e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_008541  Arth_3040  binding-protein-dependent transport systems inner membrane component  30.03 
 
 
315 aa  129  6e-29  Arthrobacter sp. FB24  Bacteria  normal  0.18898  n/a   
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
319 aa  128  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_014151  Cfla_3364  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
321 aa  128  1.0000000000000001e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0969949  hitchhiker  0.00558819 
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  29.97 
 
 
345 aa  127  2.0000000000000002e-28  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  32.7 
 
 
310 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
307 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013172  Bfae_27710  permease component of ABC-type sugar transporter  32.27 
 
 
294 aa  127  2.0000000000000002e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
309 aa  127  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
307 aa  127  3e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013171  Apre_0239  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
288 aa  127  3e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1486  MalF-type ABC sugar transport systems permease component  28.62 
 
 
309 aa  127  3e-28  Bifidobacterium longum DJO10A  Bacteria  normal  0.0456684  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  30.69 
 
 
307 aa  127  3e-28  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  30.8 
 
 
300 aa  127  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
293 aa  127  3e-28  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  28.43 
 
 
312 aa  126  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_008528  OEOE_0810  ABC-type sugar transport system, permease component  31.29 
 
 
283 aa  126  4.0000000000000003e-28  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
314 aa  126  4.0000000000000003e-28  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
295 aa  126  5e-28  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  35.1 
 
 
312 aa  126  6e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
297 aa  125  6e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  30.5 
 
 
296 aa  125  7e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  30.99 
 
 
334 aa  125  7e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
308 aa  125  7e-28  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2103  ABC transporter, permease protein  28.99 
 
 
296 aa  125  9e-28  Bacillus cereus AH187  Bacteria  normal  0.512676  n/a   
 
 
-
 
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  33.09 
 
 
290 aa  125  9e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
290 aa  125  9e-28  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  29.17 
 
 
308 aa  125  1e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  29.17 
 
 
308 aa  124  1e-27  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
309 aa  124  1e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
305 aa  124  1e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  30 
 
 
317 aa  125  1e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  32.14 
 
 
328 aa  124  2e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
308 aa  124  2e-27  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3650  ABC-type sugar transport system periplasmic component-like protein  29.23 
 
 
315 aa  124  2e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0685768 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  26.98 
 
 
295 aa  124  2e-27  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
312 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
305 aa  124  2e-27  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
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