79 homologs were found in PanDaTox collection
for query gene Krad_0042 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_0042  multiple resistance and pH regulation protein F  100 
 
 
92 aa  171  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.231877 
 
 
-
 
NC_013174  Jden_2435  multiple resistance and pH regulation protein F  48.31 
 
 
118 aa  89.4  1e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.38947 
 
 
-
 
NC_013521  Sked_35420  multisubunit Na+/H+ antiporter, MnhF subunit  54.44 
 
 
155 aa  87.8  5e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.279201 
 
 
-
 
NC_013169  Ksed_05190  multisubunit Na+/H+ antiporter, MnhF subunit  57.5 
 
 
96 aa  85.9  2e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3814  multiple resistance and pH regulation protein F  52.44 
 
 
117 aa  85.5  2e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3183  multiple resistance and pH regulation protein F  53.42 
 
 
140 aa  84  7e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3869  hypothetical protein  43.33 
 
 
92 aa  76.6  0.0000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3656  hypothetical protein  43.75 
 
 
92 aa  75.9  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_0667  multiple resistance and pH regulation protein F  42.86 
 
 
87 aa  72.4  0.000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3718  multiple resistance and pH regulation protein F  41 
 
 
99 aa  65.1  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0166  putative monovalent cation/H+ antiporter subunit F  43.37 
 
 
95 aa  62.4  0.000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.569132 
 
 
-
 
NC_013595  Sros_6651  putative monovalent cation/H+ antiporter subunit F  48.44 
 
 
86 aa  62.8  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0740  putative monovalent cation/H+ antiporter subunit F  43.9 
 
 
95 aa  62  0.000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_18930  multisubunit Na+/H+ antiporter, MnhF subunit  43.21 
 
 
112 aa  58.9  0.00000002  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3946  multiple resistance and pH regulation protein F  39.33 
 
 
86 aa  59.7  0.00000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.109243 
 
 
-
 
NC_009077  Mjls_0572  putative monovalent cation/H+ antiporter subunit F  41.46 
 
 
95 aa  58.2  0.00000004  Mycobacterium sp. JLS  Bacteria  normal  normal  0.912377 
 
 
-
 
NC_009921  Franean1_5210  hypothetical protein  37.5 
 
 
88 aa  58.2  0.00000004  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.0000708898  normal 
 
 
-
 
NC_008705  Mkms_0594  putative monovalent cation/H+ antiporter subunit F  40.96 
 
 
95 aa  57.8  0.00000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.441545 
 
 
-
 
NC_008146  Mmcs_0582  putative monovalent cation/H+ antiporter subunit F  40.96 
 
 
95 aa  57.8  0.00000005  Mycobacterium sp. MCS  Bacteria  normal  0.691651  n/a   
 
 
-
 
NC_014151  Cfla_0212  multiple resistance and pH regulation protein F  51.81 
 
 
165 aa  57  0.00000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.473082  normal 
 
 
-
 
NC_013757  Gobs_0498  multiple resistance and pH regulation protein F  48.75 
 
 
109 aa  56.2  0.0000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  34.94 
 
 
87 aa  54.3  0.0000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2860  multiple resistance and pH regulation protein F  36.67 
 
 
90 aa  53.9  0.0000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.139125  n/a   
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  29.76 
 
 
88 aa  53.5  0.000001  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_013159  Svir_14790  Multiple resistance and pH regulation protein F (MrpF / PhaF)  46.55 
 
 
88 aa  53.1  0.000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.62794  normal 
 
 
-
 
NC_008789  Hhal_2030  multiple resistance and pH regulation protein F  35.23 
 
 
90 aa  52.8  0.000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4626  multiple resistance and pH regulation protein F  45.07 
 
 
88 aa  52  0.000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2095  multiple resistance and pH regulation protein F  38.46 
 
 
90 aa  51.2  0.000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.801708  normal  0.210838 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  34.57 
 
 
91 aa  51.6  0.000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  31.87 
 
 
90 aa  50.8  0.000007  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_014211  Ndas_4890  multiple resistance and pH regulation protein F  38.2 
 
 
121 aa  50.8  0.000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.372031  normal 
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  35.05 
 
 
118 aa  49.3  0.00002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal 
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  31.33 
 
 
88 aa  48.5  0.00003  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_009456  VC0395_1125  putative monovalent cation/H+ antiporter subunit F  34.94 
 
 
103 aa  48.5  0.00003  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000095206  n/a   
 
 
-
 
NC_007333  Tfu_0346  putative cation antiporter subunit  40 
 
 
96 aa  48.5  0.00003  Thermobifida fusca YX  Bacteria  normal  0.503467  n/a   
 
 
-
 
NC_013889  TK90_0753  multiple resistance and pH regulation protein F  34.62 
 
 
91 aa  48.1  0.00004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0206212  normal 
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  35.05 
 
 
93 aa  47.8  0.00005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  35.21 
 
 
90 aa  47  0.00009  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_013172  Bfae_25160  multisubunit Na+/H+ antiporter, MnhF subunit  38.98 
 
 
211 aa  46.6  0.0001  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.0093627  n/a   
 
 
-
 
NC_012029  Hlac_0839  putative monovalent cation/H+ antiporter subunit F  36.71 
 
 
101 aa  46.2  0.0001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_011901  Tgr7_2523  multiple resistance and pH regulation protein F  35.21 
 
 
91 aa  46.6  0.0001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  28.74 
 
 
98 aa  46.2  0.0001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  32.89 
 
 
87 aa  46.2  0.0002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  33.78 
 
 
111 aa  45.8  0.0002  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_013457  VEA_000414  Na(+) H(+) antiporter subunit F  31.17 
 
 
92 aa  45.8  0.0002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1279  Na+/H+ antiporter  37.29 
 
 
137 aa  45.8  0.0002  Agrobacterium vitis S4  Bacteria  normal  0.981373  n/a   
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  32.43 
 
 
92 aa  45.4  0.0003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4839  multiple resistance and pH regulation protein F  34.94 
 
 
86 aa  45.1  0.0004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.10923  normal 
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  35.82 
 
 
91 aa  44.3  0.0006  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_013946  Mrub_0865  multiple resistance and pH regulation protein F  35.37 
 
 
88 aa  44.3  0.0006  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.717084 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  39.44 
 
 
86 aa  44.3  0.0006  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0688335 
 
 
-
 
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  35.37 
 
 
89 aa  43.5  0.0009  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal 
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  33.78 
 
 
92 aa  43.5  0.0009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal 
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  32.39 
 
 
90 aa  43.5  0.001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A1770  Na(+)/H(+) antiporter subunit F  28.74 
 
 
100 aa  43.5  0.001  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0405  hypothetical protein  28.74 
 
 
100 aa  43.5  0.001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  32.84 
 
 
92 aa  43.1  0.001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal 
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 
117 aa  43.1  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal 
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  42.19 
 
 
96 aa  43.1  0.001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  32.86 
 
 
85 aa  43.5  0.001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  31.76 
 
 
102 aa  42.7  0.002  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  31.51 
 
 
92 aa  42.4  0.002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  30.56 
 
 
91 aa  42.4  0.002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  28.95 
 
 
94 aa  42.4  0.002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  38.36 
 
 
89 aa  42.4  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 
92 aa  42.4  0.002  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_009636  Smed_0612  putative monovalent cation/H+ antiporter subunit F  34.92 
 
 
128 aa  42.4  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  0.716984  normal 
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 
92 aa  42.4  0.002  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.00558279 
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  38.36 
 
 
89 aa  42.4  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  29.73 
 
 
92 aa  42  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2858  putative monovalent cation/H+ antiporter subunit F  37.33 
 
 
91 aa  42  0.003  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.780245 
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  30.49 
 
 
89 aa  42  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  28.95 
 
 
94 aa  41.6  0.004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0110721 
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  28.95 
 
 
94 aa  41.6  0.004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal 
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  38.36 
 
 
89 aa  41.2  0.005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal 
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  35.14 
 
 
92 aa  40.4  0.007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0617372 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  33.8 
 
 
89 aa  40.8  0.007  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  31.34 
 
 
89 aa  40.4  0.009  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  31.75 
 
 
92 aa  40.4  0.009  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
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