More than 300 homologs were found in PanDaTox collection
for query gene Jden_2426 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  100 
 
 
269 aa  538  9.999999999999999e-153  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  65.06 
 
 
249 aa  321  6e-87  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  61.79 
 
 
269 aa  305  6e-82  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  60.47 
 
 
259 aa  294  1e-78  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  60.24 
 
 
255 aa  291  1e-77  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  54.07 
 
 
282 aa  260  2e-68  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  54.32 
 
 
296 aa  241  7.999999999999999e-63  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  52.21 
 
 
250 aa  237  1e-61  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  50.4 
 
 
253 aa  236  2e-61  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  50.62 
 
 
254 aa  221  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  52.02 
 
 
253 aa  221  9.999999999999999e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  52.92 
 
 
250 aa  219  3.9999999999999997e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  48.08 
 
 
252 aa  216  2.9999999999999998e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  48.1 
 
 
263 aa  215  5.9999999999999996e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  48.33 
 
 
258 aa  213  1.9999999999999998e-54  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  48.59 
 
 
259 aa  210  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  48.63 
 
 
269 aa  209  3e-53  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  48.63 
 
 
269 aa  205  7e-52  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  44.8 
 
 
251 aa  200  1.9999999999999998e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  43.51 
 
 
249 aa  197  1.0000000000000001e-49  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  47.76 
 
 
258 aa  192  3e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  45.52 
 
 
287 aa  192  4e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  45.49 
 
 
258 aa  190  2e-47  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  45.49 
 
 
258 aa  190  2e-47  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  48.56 
 
 
258 aa  189  5e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  47.76 
 
 
276 aa  188  5.999999999999999e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  45.49 
 
 
258 aa  186  3e-46  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  45.53 
 
 
258 aa  182  5.0000000000000004e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  46.12 
 
 
258 aa  178  8e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  45.04 
 
 
259 aa  164  2.0000000000000002e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  46.72 
 
 
264 aa  160  1e-38  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  34.88 
 
 
265 aa  157  2e-37  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  39.65 
 
 
270 aa  156  3e-37  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  34.5 
 
 
265 aa  156  4e-37  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  40.61 
 
 
265 aa  154  1e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  39.21 
 
 
270 aa  155  1e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  40.53 
 
 
265 aa  154  2e-36  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  38.19 
 
 
266 aa  152  5e-36  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  42.68 
 
 
258 aa  152  5.9999999999999996e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  42.29 
 
 
265 aa  151  1e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  39.92 
 
 
277 aa  150  3e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  40.35 
 
 
263 aa  149  4e-35  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  42.42 
 
 
264 aa  148  1.0000000000000001e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.41 
 
 
257 aa  147  1.0000000000000001e-34  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  39.91 
 
 
262 aa  145  5e-34  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  38.28 
 
 
265 aa  145  6e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  39.91 
 
 
262 aa  145  7.0000000000000006e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  40.27 
 
 
271 aa  145  9e-34  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  37.2 
 
 
263 aa  142  4e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  39.04 
 
 
260 aa  142  8e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  37.89 
 
 
266 aa  141  9.999999999999999e-33  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  40.27 
 
 
265 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  35.34 
 
 
260 aa  139  3.9999999999999997e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  37.89 
 
 
266 aa  139  3.9999999999999997e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  36.76 
 
 
273 aa  139  4.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  37 
 
 
281 aa  139  7e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  37 
 
 
281 aa  139  7e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  37.89 
 
 
266 aa  138  8.999999999999999e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  36.1 
 
 
266 aa  138  1e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  38.79 
 
 
266 aa  137  2e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.74 
 
 
271 aa  137  2e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  37.89 
 
 
266 aa  137  2e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  37.23 
 
 
265 aa  136  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  39.06 
 
 
262 aa  136  4e-31  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  33.87 
 
 
263 aa  136  5e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  36.56 
 
 
266 aa  135  8e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  35.45 
 
 
267 aa  135  8e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  38.14 
 
 
261 aa  135  8e-31  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  39.21 
 
 
266 aa  134  9.999999999999999e-31  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  38.16 
 
 
260 aa  134  9.999999999999999e-31  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  38.03 
 
 
270 aa  133  1.9999999999999998e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  38.63 
 
 
262 aa  134  1.9999999999999998e-30  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  37 
 
 
264 aa  134  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  39.21 
 
 
262 aa  134  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  41.41 
 
 
271 aa  133  3e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  37.67 
 
 
261 aa  132  5e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  32.84 
 
 
273 aa  132  6.999999999999999e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  34.98 
 
 
272 aa  132  7.999999999999999e-30  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  38.02 
 
 
264 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  39.21 
 
 
264 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  35.08 
 
 
255 aa  130  2.0000000000000002e-29  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  39.04 
 
 
264 aa  130  2.0000000000000002e-29  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  39.47 
 
 
266 aa  129  3e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  38.77 
 
 
264 aa  129  4.0000000000000003e-29  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  36 
 
 
259 aa  129  6e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  38.6 
 
 
261 aa  129  6e-29  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  36.4 
 
 
269 aa  129  7.000000000000001e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  39.21 
 
 
255 aa  129  7.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  37.23 
 
 
287 aa  128  8.000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  35.66 
 
 
267 aa  128  8.000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  37.34 
 
 
267 aa  128  1.0000000000000001e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  36.49 
 
 
264 aa  127  2.0000000000000002e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  38.97 
 
 
264 aa  127  3e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  36.56 
 
 
267 aa  126  4.0000000000000003e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  36.47 
 
 
257 aa  126  5e-28  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  31.18 
 
 
256 aa  125  7e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  38.25 
 
 
271 aa  125  8.000000000000001e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  36.99 
 
 
259 aa  125  1e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  36.68 
 
 
260 aa  124  1e-27  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  37.65 
 
 
262 aa  124  1e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
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