More than 300 homologs were found in PanDaTox collection
for query gene Jden_1873 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  100 
 
 
233 aa  464  9.999999999999999e-131  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  73.36 
 
 
236 aa  328  5.0000000000000004e-89  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  66.52 
 
 
234 aa  290  1e-77  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  65 
 
 
239 aa  287  1e-76  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  65.35 
 
 
231 aa  281  6.000000000000001e-75  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  60.71 
 
 
239 aa  266  2.9999999999999995e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.35 
 
 
230 aa  264  8.999999999999999e-70  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  61.14 
 
 
242 aa  263  1e-69  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.35 
 
 
229 aa  261  1e-68  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  57.71 
 
 
218 aa  253  2.0000000000000002e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  56.39 
 
 
221 aa  251  5.000000000000001e-66  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  55.07 
 
 
226 aa  249  4e-65  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  57.85 
 
 
213 aa  247  1e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  59.03 
 
 
225 aa  243  9.999999999999999e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.75 
 
 
227 aa  242  3e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  57.01 
 
 
217 aa  241  6e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.3 
 
 
244 aa  241  6e-63  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  55.98 
 
 
224 aa  241  7.999999999999999e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  55.75 
 
 
226 aa  239  2.9999999999999997e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  50.78 
 
 
261 aa  237  1e-61  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  55.95 
 
 
225 aa  236  3e-61  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  52.82 
 
 
248 aa  234  1.0000000000000001e-60  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  55.88 
 
 
249 aa  231  6e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.19 
 
 
234 aa  226  2e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  53.3 
 
 
223 aa  224  9e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  57.01 
 
 
216 aa  223  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.1 
 
 
215 aa  223  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  52.19 
 
 
224 aa  221  6e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.33 
 
 
220 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  53.3 
 
 
224 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.74 
 
 
226 aa  216  2e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  53.57 
 
 
225 aa  216  2e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.89 
 
 
226 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  49.12 
 
 
228 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.48 
 
 
222 aa  216  2e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  48.67 
 
 
218 aa  216  2.9999999999999998e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.21 
 
 
223 aa  216  4e-55  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50 
 
 
218 aa  215  5.9999999999999996e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  51.3 
 
 
224 aa  215  5.9999999999999996e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.84 
 
 
225 aa  214  5.9999999999999996e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  49.57 
 
 
225 aa  214  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.66 
 
 
225 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  49.78 
 
 
218 aa  212  3.9999999999999995e-54  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  52.19 
 
 
230 aa  211  4.9999999999999996e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50 
 
 
215 aa  212  4.9999999999999996e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  48.91 
 
 
224 aa  210  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  56.77 
 
 
218 aa  210  2e-53  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.352272 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  50.67 
 
 
215 aa  209  3e-53  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  51.98 
 
 
224 aa  209  4e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  52.91 
 
 
221 aa  209  4e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.22 
 
 
219 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.63 
 
 
226 aa  208  5e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  48.02 
 
 
227 aa  208  6e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  48.03 
 
 
228 aa  207  1e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  49.33 
 
 
225 aa  207  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  50 
 
 
221 aa  207  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  50.66 
 
 
302 aa  206  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_014210  Ndas_4009  two component transcriptional regulator, LuxR family  50.22 
 
 
231 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0669057  normal  0.324745 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.86 
 
 
261 aa  206  2e-52  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  47.98 
 
 
221 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  48.7 
 
 
222 aa  206  3e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  49.13 
 
 
228 aa  206  3e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  48.46 
 
 
221 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  49.78 
 
 
220 aa  204  7e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  48 
 
 
223 aa  204  7e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.9 
 
 
225 aa  204  8e-52  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.78 
 
 
220 aa  204  8e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  48.67 
 
 
216 aa  204  1e-51  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  48.68 
 
 
219 aa  203  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  50 
 
 
219 aa  204  1e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.78 
 
 
220 aa  204  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50.22 
 
 
230 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  203  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  47.39 
 
 
230 aa  203  2e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.23 
 
 
239 aa  203  2e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  48.89 
 
 
226 aa  203  2e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  48.71 
 
 
234 aa  203  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.47 
 
 
229 aa  203  2e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  50.89 
 
 
234 aa  203  2e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.79 
 
 
226 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  49.56 
 
 
241 aa  202  4e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  48.71 
 
 
230 aa  202  4e-51  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.79 
 
 
241 aa  202  5e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  49.57 
 
 
247 aa  201  7e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.79 
 
 
221 aa  201  8e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.78 
 
 
258 aa  201  9.999999999999999e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  49.78 
 
 
226 aa  199  1.9999999999999998e-50  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  48.47 
 
 
236 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  51.05 
 
 
235 aa  199  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  48.9 
 
 
215 aa  199  3.9999999999999996e-50  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  48.43 
 
 
220 aa  199  3.9999999999999996e-50  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  47.83 
 
 
228 aa  198  6e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  48.66 
 
 
215 aa  197  7.999999999999999e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.02 
 
 
226 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  49.12 
 
 
222 aa  197  1.0000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.76 
 
 
250 aa  197  2.0000000000000003e-49  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  48.9 
 
 
226 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  49.56 
 
 
225 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  47.03 
 
 
244 aa  196  3e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.84 
 
 
225 aa  196  4.0000000000000005e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
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