More than 300 homologs were found in PanDaTox collection
for query gene Jden_1865 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  100 
 
 
434 aa  867    Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  55.28 
 
 
434 aa  402  1e-111  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  61.26 
 
 
303 aa  345  7e-94  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  59.25 
 
 
313 aa  343  2.9999999999999997e-93  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  60.56 
 
 
363 aa  334  2e-90  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  52.92 
 
 
296 aa  292  8e-78  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  41.88 
 
 
489 aa  261  3e-68  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  37.02 
 
 
432 aa  240  4e-62  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  49.05 
 
 
407 aa  223  4e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  41.84 
 
 
320 aa  207  2e-52  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  45.05 
 
 
404 aa  207  4e-52  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  40.66 
 
 
307 aa  202  9.999999999999999e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  42.16 
 
 
466 aa  199  7e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  41.02 
 
 
311 aa  197  3e-49  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  41.02 
 
 
311 aa  197  3e-49  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  41.02 
 
 
311 aa  197  3e-49  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  41.28 
 
 
404 aa  194  2e-48  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  40.44 
 
 
409 aa  193  6e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  36.39 
 
 
463 aa  191  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  40.34 
 
 
336 aa  187  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  42.61 
 
 
326 aa  187  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  36.72 
 
 
393 aa  185  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  44.03 
 
 
307 aa  184  3e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  36.39 
 
 
394 aa  181  2e-44  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  41.4 
 
 
424 aa  179  7e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  38.23 
 
 
306 aa  174  3.9999999999999995e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  35.42 
 
 
497 aa  173  5e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  34.65 
 
 
509 aa  169  1e-40  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  36.92 
 
 
390 aa  166  6.9999999999999995e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  37.79 
 
 
491 aa  162  1e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  34.59 
 
 
512 aa  159  8e-38  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  33.54 
 
 
545 aa  158  2e-37  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  35.56 
 
 
486 aa  158  2e-37  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  35.87 
 
 
505 aa  155  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  34.34 
 
 
573 aa  154  2.9999999999999998e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  36.52 
 
 
625 aa  150  5e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  34.88 
 
 
504 aa  148  1.0000000000000001e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  33.91 
 
 
549 aa  149  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  33.23 
 
 
516 aa  141  3e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  35.96 
 
 
468 aa  140  3.9999999999999997e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  36.77 
 
 
453 aa  134  1.9999999999999998e-30  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  36.07 
 
 
414 aa  134  3.9999999999999996e-30  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  30.45 
 
 
382 aa  133  5e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  38.83 
 
 
374 aa  133  6.999999999999999e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  35.89 
 
 
468 aa  133  6.999999999999999e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  34.6 
 
 
530 aa  133  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.45 
 
 
349 aa  131  2.0000000000000002e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.88 
 
 
560 aa  130  3e-29  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  41.62 
 
 
383 aa  130  4.0000000000000003e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  33.44 
 
 
521 aa  130  4.0000000000000003e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  33.33 
 
 
520 aa  130  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  33.7 
 
 
618 aa  129  9.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  33.1 
 
 
567 aa  129  1.0000000000000001e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  41.38 
 
 
379 aa  128  2.0000000000000002e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  34.87 
 
 
375 aa  127  4.0000000000000003e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  36.95 
 
 
481 aa  127  4.0000000000000003e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  34.87 
 
 
375 aa  127  5e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  34.87 
 
 
375 aa  127  5e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  34.87 
 
 
375 aa  127  5e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  34.87 
 
 
375 aa  127  5e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  38.3 
 
 
377 aa  126  8.000000000000001e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  34.76 
 
 
419 aa  126  8.000000000000001e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  34.45 
 
 
374 aa  125  1e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  34.45 
 
 
372 aa  126  1e-27  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  34.73 
 
 
506 aa  126  1e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  34.84 
 
 
420 aa  125  1e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  34.03 
 
 
377 aa  124  2e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  31.96 
 
 
512 aa  123  7e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  31.72 
 
 
417 aa  123  8e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  32.53 
 
 
319 aa  122  9.999999999999999e-27  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  31.3 
 
 
732 aa  120  3e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  33.2 
 
 
374 aa  120  3.9999999999999996e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  31.21 
 
 
410 aa  120  3.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  36.4 
 
 
414 aa  120  3.9999999999999996e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  34.21 
 
 
487 aa  120  4.9999999999999996e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  34.71 
 
 
381 aa  120  7e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  43.45 
 
 
304 aa  120  7e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  34.57 
 
 
389 aa  119  9e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  29.58 
 
 
480 aa  119  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  33.33 
 
 
584 aa  119  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.98 
 
 
400 aa  118  1.9999999999999998e-25  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  33.62 
 
 
308 aa  117  3e-25  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  33.62 
 
 
392 aa  117  3e-25  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  42.24 
 
 
302 aa  117  5e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  33.47 
 
 
497 aa  117  5e-25  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  42.07 
 
 
299 aa  116  7.999999999999999e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  29.94 
 
 
563 aa  116  8.999999999999998e-25  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  42.26 
 
 
303 aa  115  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  36.94 
 
 
526 aa  115  1.0000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  41.61 
 
 
302 aa  115  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  32.16 
 
 
522 aa  115  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  42.26 
 
 
303 aa  115  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  42.77 
 
 
304 aa  115  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  42.26 
 
 
303 aa  114  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  42.26 
 
 
303 aa  115  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  40.37 
 
 
302 aa  115  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  30.58 
 
 
493 aa  115  2.0000000000000002e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  30.94 
 
 
478 aa  114  4.0000000000000004e-24  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  31.43 
 
 
445 aa  114  4.0000000000000004e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  37.63 
 
 
403 aa  113  5e-24  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
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