More than 300 homologs were found in PanDaTox collection
for query gene Jden_0673 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
533 aa  1062    Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
563 aa  320  3.9999999999999996e-86  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
566 aa  313  3.9999999999999997e-84  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  35.11 
 
 
567 aa  312  1e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
566 aa  311  1e-83  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  36.61 
 
 
549 aa  308  1.0000000000000001e-82  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
563 aa  304  2.0000000000000002e-81  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3836  Cache, type 2  35.36 
 
 
661 aa  301  2e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.337162  normal 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  37.83 
 
 
661 aa  299  1e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  34.18 
 
 
556 aa  295  1e-78  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.48 
 
 
526 aa  295  1e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
664 aa  293  7e-78  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.59 
 
 
566 aa  291  3e-77  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  34.35 
 
 
543 aa  288  2e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
526 aa  288  2e-76  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  36.63 
 
 
544 aa  286  5e-76  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
544 aa  285  2.0000000000000002e-75  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  33.14 
 
 
569 aa  281  2e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
526 aa  279  9e-74  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  34.96 
 
 
548 aa  279  1e-73  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
544 aa  278  2e-73  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
575 aa  276  6e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
544 aa  275  1.0000000000000001e-72  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
544 aa  275  1.0000000000000001e-72  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  30.38 
 
 
545 aa  273  5.000000000000001e-72  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  34.16 
 
 
543 aa  271  2.9999999999999997e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.46 
 
 
546 aa  269  8.999999999999999e-71  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  34.89 
 
 
563 aa  268  2e-70  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  36.27 
 
 
549 aa  266  5.999999999999999e-70  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
569 aa  266  5.999999999999999e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  32.43 
 
 
736 aa  266  8.999999999999999e-70  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
541 aa  263  8.999999999999999e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
546 aa  260  4e-68  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
587 aa  260  5.0000000000000005e-68  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  32.61 
 
 
544 aa  258  1e-67  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_008576  Mmc1_2492  methyl-accepting chemotaxis sensory transducer  32.37 
 
 
787 aa  258  2e-67  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000288595  normal  0.31948 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
567 aa  258  3e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.25 
 
 
564 aa  257  4e-67  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.94 
 
 
584 aa  256  6e-67  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008576  Mmc1_2392  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
787 aa  254  3e-66  Magnetococcus sp. MC-1  Bacteria  normal  0.467356  normal  0.0918963 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
585 aa  253  5.000000000000001e-66  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  32.68 
 
 
559 aa  253  6e-66  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
560 aa  252  9.000000000000001e-66  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
561 aa  251  3e-65  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  30.64 
 
 
715 aa  250  6e-65  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
570 aa  249  6e-65  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
517 aa  249  1e-64  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
517 aa  248  2e-64  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  32.47 
 
 
515 aa  246  4.9999999999999997e-64  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
584 aa  246  6.999999999999999e-64  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  32.62 
 
 
565 aa  244  1.9999999999999999e-63  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
573 aa  245  1.9999999999999999e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_008576  Mmc1_3547  methyl-accepting chemotaxis sensory transducer  30.63 
 
 
676 aa  245  1.9999999999999999e-63  Magnetococcus sp. MC-1  Bacteria  normal  0.126617  normal 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
517 aa  245  1.9999999999999999e-63  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
519 aa  243  6e-63  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4018  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
713 aa  242  1e-62  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000208845  n/a   
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
562 aa  240  4e-62  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
517 aa  240  4e-62  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
540 aa  240  5e-62  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  32.8 
 
 
554 aa  239  9e-62  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
678 aa  238  2e-61  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  31.24 
 
 
540 aa  238  2e-61  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
517 aa  238  3e-61  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  31.51 
 
 
585 aa  237  5.0000000000000005e-61  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  30.83 
 
 
541 aa  236  6e-61  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  30.83 
 
 
541 aa  236  6e-61  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
548 aa  235  1.0000000000000001e-60  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
518 aa  235  2.0000000000000002e-60  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  31.95 
 
 
517 aa  235  2.0000000000000002e-60  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  31.95 
 
 
517 aa  234  2.0000000000000002e-60  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1130  methyl-accepting chemotaxis sensory transducer with Cache sensor  30 
 
 
571 aa  233  4.0000000000000004e-60  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  33.67 
 
 
513 aa  233  5e-60  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.67 
 
 
513 aa  233  5e-60  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
513 aa  231  2e-59  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  33.68 
 
 
513 aa  231  3e-59  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  33.27 
 
 
608 aa  226  9e-58  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  30.77 
 
 
538 aa  226  1e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  46.82 
 
 
522 aa  225  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
568 aa  224  3e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  30.41 
 
 
549 aa  223  8e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
513 aa  223  9e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  34.19 
 
 
464 aa  222  9.999999999999999e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  33 
 
 
627 aa  223  9.999999999999999e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_008751  Dvul_2947  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
749 aa  221  1.9999999999999999e-56  Desulfovibrio vulgaris DP4  Bacteria  normal  0.732257  normal 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
565 aa  221  3e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
548 aa  220  3.9999999999999997e-56  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.03 
 
 
558 aa  220  6e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  30.78 
 
 
513 aa  219  7e-56  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  31.18 
 
 
565 aa  219  7e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
598 aa  219  1e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  29.91 
 
 
536 aa  219  1e-55  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
702 aa  219  1e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  30.61 
 
 
546 aa  218  2e-55  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  29.4 
 
 
519 aa  218  2.9999999999999998e-55  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  32.98 
 
 
579 aa  217  4e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_007519  Dde_2734  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
751 aa  217  4e-55  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  30.43 
 
 
546 aa  217  4e-55  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  30.43 
 
 
546 aa  217  4e-55  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  30.43 
 
 
546 aa  217  4e-55  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  30.43 
 
 
546 aa  217  4e-55  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
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