153 homologs were found in PanDaTox collection
for query gene JJD26997_0457 on replicon NC_009707
Organism: Campylobacter jejuni subsp. doylei 269.97



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009707  JJD26997_0457  5-methylaminomethyl-2-thiouridine methyltransferase  100 
 
 
613 aa  1238  Campylobacter jejuni subsp. doylei 269.97  Bacteria  unclonable  8.95922e-10  n/a   
 
 
-
 
NC_003912  CJE1404  5-methylaminomethyl-2-thiouridine methyltransferase  96.9 
 
 
613 aa  1202  Campylobacter jejuni RM1221  Bacteria  normal  0.628111  n/a   
 
 
-
 
NC_012039  Cla_0621  5-methylaminomethyl-2-thiouridine methyltransferase  61.3 
 
 
612 aa  700  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1284  5-methylaminomethyl-2-thiouridine methyltransferase  96.9 
 
 
613 aa  1202  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  hitchhiker  0.000566158  n/a   
 
 
-
 
NC_009802  CCC13826_0496  5-methylaminomethyl-2-thiouridine methyltransferase  39.84 
 
 
621 aa  434  1e-120  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1277  5-methylaminomethyl-2-thiouridine methyltransferase  35.95 
 
 
667 aa  375  1e-102  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.0226023  n/a   
 
 
-
 
NC_008599  CFF8240_1208  5-methylaminomethyl-2-thiouridine methyltransferase  36.54 
 
 
612 aa  341  3e-92  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.308297  n/a   
 
 
-
 
NC_009800  EcHS_A2475  5-methylaminomethyl-2-thiouridine methyltransferase  30.68 
 
 
668 aa  270  4e-71  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1328  5-methylaminomethyl-2-thiouridine methyltransferase  30.68 
 
 
668 aa  270  4e-71  Escherichia coli ATCC 8739  Bacteria  normal  0.831924  normal 
 
 
-
 
NC_010658  SbBS512_E2702  5-methylaminomethyl-2-thiouridine methyltransferase  30.38 
 
 
668 aa  268  2e-70  Shigella boydii CDC 3083-94  Bacteria  normal  0.673186  n/a   
 
 
-
 
NC_012892  B21_02209  hypothetical protein  30.83 
 
 
668 aa  268  2e-70  Escherichia coli BL21  Bacteria  normal  0.334228  n/a   
 
 
-
 
CP001637  EcDH1_1332  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  30.53 
 
 
668 aa  268  2e-70  Escherichia coli DH1  Bacteria  normal  0.602375  n/a   
 
 
-
 
CP001509  ECD_02249  hypothetical protein  30.83 
 
 
668 aa  268  2e-70  Escherichia coli BL21(DE3)  Bacteria  normal  0.425785  n/a   
 
 
-
 
NC_011312  VSAL_I1070  5-methylaminomethyl-2-thiouridine methyltransferase  31.53 
 
 
680 aa  267  4e-70  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.388206  n/a   
 
 
-
 
NC_013456  VEA_002869  5-methylaminomethyl-2-thiouridine-forming enzyme MnmC  29.64 
 
 
672 aa  266  9e-70  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00103068  n/a   
 
 
-
 
NC_011353  ECH74115_3465  5-methylaminomethyl-2-thiouridine methyltransferase  30.08 
 
 
668 aa  264  4e-69  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2481  5-methylaminomethyl-2-thiouridine methyltransferase  30.23 
 
 
668 aa  261  2e-68  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_03106  5-methylaminomethyl-2-thiouridine methyltransferase  28.89 
 
 
672 aa  261  3e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3230  5-methylaminomethyl-2-thiouridine methyltransferase  27.19 
 
 
657 aa  259  9e-68  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1694  5-methylaminomethyl-2-thiouridine methyltransferase  28.21 
 
 
674 aa  258  2e-67  Vibrio cholerae O395  Bacteria  hitchhiker  0.00252388  n/a   
 
 
-
 
NC_011205  SeD_A2732  5-methylaminomethyl-2-thiouridine methyltransferase  30.03 
 
 
666 aa  255  1e-66  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2568  5-methylaminomethyl-2-thiouridine methyltransferase  30.03 
 
 
666 aa  256  1e-66  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.580805  normal 
 
 
-
 
NC_011083  SeHA_C2621  5-methylaminomethyl-2-thiouridine methyltransferase  30 
 
 
666 aa  255  2e-66  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  3.50397e-06 
 
 
-
 
NC_011149  SeAg_B2519  5-methylaminomethyl-2-thiouridine methyltransferase  29.77 
 
 
666 aa  254  3e-66  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2608  5-methylaminomethyl-2-thiouridine methyltransferase  30.13 
 
 
666 aa  254  3e-66  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2619  5-methylaminomethyl-2-thiouridine methyltransferase  29.77 
 
 
668 aa  253  6e-66  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1639  oxidoreductase, FAD-binding protein  27.2 
 
 
660 aa  252  1e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.562541  n/a   
 
 
-
 
NC_009436  Ent638_2872  5-methylaminomethyl-2-thiouridine methyltransferase  28.38 
 
 
666 aa  251  2e-65  Enterobacter sp. 638  Bacteria  normal  0.715577  normal  0.0703666 
 
 
-
 
NC_009654  Mmwyl1_3401  hypothetical protein  27.8 
 
 
674 aa  250  7e-65  Marinomonas sp. MWYL1  Bacteria  normal  0.473665  normal 
 
 
-
 
NC_008709  Ping_1996  fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme  29.3 
 
 
690 aa  249  1e-64  Psychromonas ingrahamii 37  Bacteria  normal  0.155036  normal  0.387333 
 
 
-
 
NC_013421  Pecwa_1458  5-methylaminomethyl-2-thiouridine methyltransferase  28.38 
 
 
675 aa  249  1e-64  Pectobacterium wasabiae WPP163  Bacteria  normal  0.622829  n/a   
 
 
-
 
NC_007005  Psyr_3742  5-methylaminomethyl-2-thiouridine methyltransferase  27.63 
 
 
665 aa  248  2e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  decreased coverage  0.0063824 
 
 
-
 
NC_006368  lpp1489  hypothetical protein  28.49 
 
 
666 aa  248  2e-64  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1494  hypothetical protein  28.57 
 
 
666 aa  248  3e-64  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010465  YPK_1519  5-methylaminomethyl-2-thiouridine methyltransferase  28.32 
 
 
689 aa  247  6e-64  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0252518  n/a   
 
 
-
 
NC_010159  YpAngola_A0372  5-methylaminomethyl-2-thiouridine methyltransferase  28.32 
 
 
689 aa  247  6e-64  Yersinia pestis Angola  Bacteria  hitchhiker  0.000353518  normal 
 
 
-
 
NC_009708  YpsIP31758_1410  5-methylaminomethyl-2-thiouridine methyltransferase  28.32 
 
 
689 aa  246  8e-64  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  2.03784e-07  n/a   
 
 
-
 
NC_012917  PC1_2806  5-methylaminomethyl-2-thiouridine methyltransferase  28.33 
 
 
675 aa  246  1e-63  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.641074  n/a   
 
 
-
 
NC_012880  Dd703_2586  5-methylaminomethyl-2-thiouridine methyltransferase  28.38 
 
 
675 aa  245  2e-63  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4098  5-methylaminomethyl-2-thiouridine methyltransferase  26.24 
 
 
659 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_19400  5-methylaminomethyl-2-thiouridine methyltransferase  26.24 
 
 
654 aa  241  3e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0825831  normal 
 
 
-
 
NC_010501  PputW619_1359  5-methylaminomethyl-2-thiouridine methyltransferase  26.63 
 
 
657 aa  237  4e-61  Pseudomonas putida W619  Bacteria  normal  0.490609  normal  0.307096 
 
 
-
 
NC_009656  PSPA7_1671  5-methylaminomethyl-2-thiouridine methyltransferase  26.09 
 
 
654 aa  237  5e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.86051  n/a   
 
 
-
 
NC_011901  Tgr7_1861  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  25.15 
 
 
661 aa  234  3e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3808  hypothetical protein  27.68 
 
 
682 aa  233  8e-60  Colwellia psychrerythraea 34H  Bacteria  normal  0.424966  n/a   
 
 
-
 
NC_012912  Dd1591_1358  5-methylaminomethyl-2-thiouridine methyltransferase  27.57 
 
 
672 aa  233  1e-59  Dickeya zeae Ech1591  Bacteria  normal  0.0608182  n/a   
 
 
-
 
NC_010322  PputGB1_1343  5-methylaminomethyl-2-thiouridine methyltransferase  25.9 
 
 
654 aa  232  2e-59  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3369  5-methylaminomethyl-2-thiouridine methyltransferase  27.04 
 
 
673 aa  228  2e-58  Serratia proteamaculans 568  Bacteria  decreased coverage  0.00235092  normal 
 
 
-
 
NC_008309  HS_0664  5-methylaminomethyl-2-thiouridine methyltransferase  28.76 
 
 
676 aa  227  5e-58  Haemophilus somnus 129PT  Bacteria  normal  0.0436264  n/a   
 
 
-
 
NC_008576  Mmc1_2377  hypothetical protein  28.03 
 
 
667 aa  223  9e-57  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.954774 
 
 
-
 
NC_008228  Patl_3384  hypothetical protein  28.93 
 
 
705 aa  223  9e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0003  5-methylaminomethyl-2-thiouridine methyltransferase  25.73 
 
 
657 aa  221  3e-56  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_34940  5-methylaminomethyl-2-thiouridine methyltransferase  27.85 
 
 
653 aa  221  4e-56  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1390  hypothetical protein  25.67 
 
 
622 aa  221  4e-56  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.909333 
 
 
-
 
NC_010622  Bphy_3066  5-methylaminomethyl-2-thiouridine methyltransferase  24.85 
 
 
655 aa  217  5e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.16811 
 
 
-
 
NC_010681  Bphyt_3932  5-methylaminomethyl-2-thiouridine methyltransferase  24.16 
 
 
656 aa  216  7e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1751  5-methylaminomethyl-2-thiouridine methyltransferase  25.72 
 
 
654 aa  216  8e-55  Pseudomonas putida KT2440  Bacteria  normal  0.266449  normal 
 
 
-
 
NC_007973  Rmet_1887  5-methylaminomethyl-2-thiouridine methyltransferase  23.9 
 
 
672 aa  216  1e-54  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4505  5-methylaminomethyl-2-thiouridine methyltransferase  23.9 
 
 
656 aa  215  2e-54  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3963  5-methylaminomethyl-2-thiouridine methyltransferase  25.57 
 
 
654 aa  215  2e-54  Pseudomonas putida F1  Bacteria  normal  0.94523  normal  0.0279642 
 
 
-
 
NC_007520  Tcr_0130  hypothetical protein  26.47 
 
 
674 aa  214  3e-54  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.000346728  n/a   
 
 
-
 
NC_007347  Reut_A1378  5-methylaminomethyl-2-thiouridine methyltransferase  23.56 
 
 
668 aa  212  1e-53  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0067  5-methylaminomethyl-2-thiouridine methyltransferase  23.28 
 
 
657 aa  209  1e-52  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2850  5-methylaminomethyl-2-thiouridine methyltransferase  25.99 
 
 
644 aa  209  1e-52  Dechloromonas aromatica RCB  Bacteria  normal  0.413253  normal  0.437245 
 
 
-
 
NC_007963  Csal_0704  hypothetical protein  23.94 
 
 
699 aa  201  3e-50  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1170  hypothetical protein  26.95 
 
 
631 aa  201  4e-50  Marinobacter aquaeolei VT8  Bacteria  normal  0.285143  n/a   
 
 
-
 
NC_012856  Rpic12D_1538  5-methylaminomethyl-2-thiouridine methyltransferase  24.62 
 
 
672 aa  200  6e-50  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0998844 
 
 
-
 
NC_003295  RSc1709  5-methylaminomethyl-2-thiouridine methyltransferase  23.38 
 
 
657 aa  199  1e-49  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0318232 
 
 
-
 
NC_010682  Rpic_1871  5-methylaminomethyl-2-thiouridine methyltransferase  23.4 
 
 
672 aa  196  8e-49  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0302238 
 
 
-
 
NC_011662  Tmz1t_1956  5-methylaminomethyl-2-thiouridine methyltransferase  23.96 
 
 
644 aa  192  1e-47  Thauera sp. MZ1T  Bacteria  normal  0.243551  n/a   
 
 
-
 
NC_008390  Bamb_0056  5-methylaminomethyl-2-thiouridine methyltransferase  22.19 
 
 
652 aa  180  8e-44  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3248  5-methylaminomethyl-2-thiouridine methyltransferase  20.55 
 
 
648 aa  180  9e-44  Burkholderia sp. 383  Bacteria  normal  normal  0.826772 
 
 
-
 
NC_007912  Sde_1471  hypothetical protein  25.94 
 
 
707 aa  177  5e-43  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0066  5-methylaminomethyl-2-thiouridine methyltransferase  21.35 
 
 
652 aa  177  7e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0743  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  25.27 
 
 
668 aa  173  8e-42  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2517  hypothetical protein  23.99 
 
 
585 aa  166  9e-40  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0085  5-methylaminomethyl-2-thiouridine methyltransferase  20.76 
 
 
643 aa  160  8e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0066  5-methylaminomethyl-2-thiouridine methyltransferase  20.76 
 
 
643 aa  159  1e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0004  5-methylaminomethyl-2-thiouridine methyltransferase  20.76 
 
 
643 aa  159  2e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2446  FAD dependent oxidoreductase  24.29 
 
 
680 aa  157  6e-37  Shewanella putrefaciens CN-32  Bacteria  unclonable  2.88925e-07  n/a   
 
 
-
 
NC_009665  Shew185_2764  FAD dependent oxidoreductase  24.15 
 
 
685 aa  156  8e-37  Shewanella baltica OS185  Bacteria  hitchhiker  0.00507569  n/a   
 
 
-
 
NC_011663  Sbal223_1612  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  24.64 
 
 
708 aa  155  2e-36  Shewanella baltica OS223  Bacteria  decreased coverage  8.12918e-06  normal 
 
 
-
 
NC_007404  Tbd_1641  5-methylaminomethyl-2-thiouridine methyltransferase  22.1 
 
 
616 aa  154  4e-36  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.168869  normal 
 
 
-
 
NC_009997  Sbal195_2841  FAD dependent oxidoreductase  24.24 
 
 
708 aa  154  5e-36  Shewanella baltica OS195  Bacteria  unclonable  1.53917e-05  decreased coverage  0.000123138 
 
 
-
 
NC_013889  TK90_1076  protein of unknown function DUF752  22.5 
 
 
619 aa  154  5e-36  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.506712  normal 
 
 
-
 
NC_008752  Aave_3048  hypothetical protein  22.32 
 
 
635 aa  152  2e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  0.115559  normal  0.0258128 
 
 
-
 
NC_009052  Sbal_2747  FAD dependent oxidoreductase  24.18 
 
 
713 aa  151  4e-35  Shewanella baltica OS155  Bacteria  hitchhiker  0.00546324  n/a   
 
 
-
 
NC_011138  MADE_01191  fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme  27.31 
 
 
741 aa  149  1e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1421  FAD dependent oxidoreductase  24.23 
 
 
642 aa  147  7e-34  Shewanella sp. MR-4  Bacteria  normal  0.0305521  normal 
 
 
-
 
NC_008781  Pnap_2424  hypothetical protein  22.68 
 
 
637 aa  146  1e-33  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1964  hypothetical protein  20.51 
 
 
653 aa  145  2e-33  Methylibium petroleiphilum PM1  Bacteria  normal  0.117707  normal 
 
 
-
 
NC_008785  BMASAVP1_A3396  5-methylaminomethyl-2-thiouridine methyltransferase  25.96 
 
 
708 aa  143  7e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.145892  n/a   
 
 
-
 
NC_006348  BMA2914  5-methylaminomethyl-2-thiouridine methyltransferase  25.75 
 
 
660 aa  142  2e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0003  5-methylaminomethyl-2-thiouridine methyltransferase  25.75 
 
 
711 aa  142  2e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2973  5-methylaminomethyl-2-thiouridine methyltransferase  25.75 
 
 
711 aa  142  2e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1989  hypothetical protein  28.21 
 
 
739 aa  142  2e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  decreased coverage  0.000136918 
 
 
-
 
NC_008836  BMA10229_A1628  5-methylaminomethyl-2-thiouridine methyltransferase  25.75 
 
 
711 aa  142  2e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0217  5-methylaminomethyl-2-thiouridine methyltransferase  25.75 
 
 
660 aa  142  2e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0003  5-methylaminomethyl-2-thiouridine methyltransferase  25.96 
 
 
708 aa  140  5e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1701  hypothetical protein  23.76 
 
 
696 aa  140  9e-32  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
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