More than 300 homologs were found in PanDaTox collection
for query gene JJD26997_0024 on replicon NC_009707
Organism: Campylobacter jejuni subsp. doylei 269.97



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009707  JJD26997_0024  RNA pseudouridine synthase family protein  100 
 
 
300 aa  602  1.0000000000000001e-171  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0049  RNA pseudouridine synthase family protein  96.33 
 
 
300 aa  583  1.0000000000000001e-165  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0022  RNA pseudouridylate synthase family protein  95.67 
 
 
300 aa  579  1e-164  Campylobacter jejuni RM1221  Bacteria  normal  0.867286  n/a   
 
 
-
 
NC_012039  Cla_0023  putative ribosomal pseudouridine synthase  68.14 
 
 
300 aa  414  9.999999999999999e-116  Campylobacter lari RM2100  Bacteria  normal  0.835317  n/a   
 
 
-
 
NC_009715  CCV52592_1120  putative prophage LambdaCh01, recombination protein Bet  54.39 
 
 
305 aa  338  7e-92  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1893  disulfide isomerase  50.68 
 
 
307 aa  306  3e-82  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1741  RNA pseudouridine synthase  49.67 
 
 
304 aa  301  1e-80  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1818  RNA pseudouridine synthase  47.77 
 
 
319 aa  293  3e-78  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0056  pseudouridine synthase  39.53 
 
 
302 aa  232  7.000000000000001e-60  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_2094  pseudouridine synthase, RluD  38.67 
 
 
304 aa  219  6e-56  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1559  pseudouridine synthase, RluA family  29.09 
 
 
344 aa  137  2e-31  Eggerthella lenta DSM 2243  Bacteria  normal  0.627219  hitchhiker  0.0055148 
 
 
-
 
NC_007614  Nmul_A1976  pseudouridine synthase, RluD  30.25 
 
 
318 aa  131  1.0000000000000001e-29  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3127  pseudouridine synthase, RluA family  28.67 
 
 
327 aa  130  3e-29  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0989  RluA family pseudouridine synthase  35.78 
 
 
306 aa  129  5.0000000000000004e-29  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.00899774  n/a   
 
 
-
 
NC_013385  Adeg_1604  pseudouridine synthase, RluA family  32.76 
 
 
331 aa  128  1.0000000000000001e-28  Ammonifex degensii KC4  Bacteria  normal  0.357256  n/a   
 
 
-
 
NC_009675  Anae109_1958  RluA family pseudouridine synthase  29.89 
 
 
293 aa  126  3e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.576308  normal  0.790812 
 
 
-
 
NC_007498  Pcar_2950  suppressor of ftsH mutation  31.47 
 
 
326 aa  125  1e-27  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0998  pseudouridine synthase, RluA family  31.29 
 
 
547 aa  122  6e-27  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.012801 
 
 
-
 
NC_007951  Bxe_A2346  ribosomal large subunit pseudouridine synthase D  27.59 
 
 
438 aa  122  6e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0455755 
 
 
-
 
NC_008527  LACR_1082  ribosomal large subunit pseudouridine synthase D  31.15 
 
 
301 aa  122  9e-27  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.463864  n/a   
 
 
-
 
NC_010084  Bmul_1481  RluA family pseudouridine synthase  28.57 
 
 
400 aa  122  9e-27  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.00249005  normal  0.0889319 
 
 
-
 
NC_007404  Tbd_0810  ribosomal large subunit pseudouridine synthase D  31.33 
 
 
318 aa  121  9.999999999999999e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.043607  normal 
 
 
-
 
NC_007510  Bcep18194_A5094  ribosomal large subunit pseudouridine synthase D  27.34 
 
 
402 aa  121  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  normal  0.760184 
 
 
-
 
NC_010508  Bcenmc03_1817  RluA family pseudouridine synthase  25.42 
 
 
360 aa  121  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.294999 
 
 
-
 
NC_008062  Bcen_6286  pseudouridine synthase, RluD  25.69 
 
 
402 aa  121  9.999999999999999e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1014  pseudouridylate synthase, 23S RNA-specific  37.16 
 
 
304 aa  121  9.999999999999999e-27  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000716198  normal 
 
 
-
 
NC_008542  Bcen2424_1793  RluA family pseudouridine synthase  25.69 
 
 
402 aa  121  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1841  pseudouridine synthase, RluA family  28.83 
 
 
431 aa  121  9.999999999999999e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.482122  normal  0.168334 
 
 
-
 
NC_011901  Tgr7_0815  pseudouridine synthase, RluA family  31.9 
 
 
315 aa  120  1.9999999999999998e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.689288  n/a   
 
 
-
 
NC_007651  BTH_I2253  ribosomal large subunit pseudouridine synthase D  28.68 
 
 
391 aa  120  1.9999999999999998e-26  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.00391915  n/a   
 
 
-
 
NC_010551  BamMC406_1704  RluA family pseudouridine synthase  27.34 
 
 
407 aa  121  1.9999999999999998e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.225391  normal 
 
 
-
 
NC_010622  Bphy_0967  RluA family pseudouridine synthase  26.74 
 
 
436 aa  120  1.9999999999999998e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1731  RluA family pseudouridine synthase  27.34 
 
 
405 aa  121  1.9999999999999998e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.895388  n/a   
 
 
-
 
NC_013739  Cwoe_3518  pseudouridine synthase, RluA family  30.36 
 
 
299 aa  121  1.9999999999999998e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2034  pseudouridine synthase, RluA family  29.83 
 
 
319 aa  119  3.9999999999999996e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0878  RluA family pseudouridine synthase  25.93 
 
 
325 aa  120  3.9999999999999996e-26  Marinobacter aquaeolei VT8  Bacteria  normal  0.175115  n/a   
 
 
-
 
NC_002977  MCA0972  ribosomal large subunit pseudouridine synthase D  29 
 
 
334 aa  119  4.9999999999999996e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0386  RluA family pseudouridine synthase  29.23 
 
 
303 aa  118  9.999999999999999e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0008  pseudouridine synthase, RluA family  29.89 
 
 
323 aa  117  1.9999999999999998e-25  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011374  UUR10_0318  RluA  34.45 
 
 
299 aa  117  1.9999999999999998e-25  Ureaplasma urealyticum serovar 10 str. ATCC 33699  Bacteria  normal  0.264747  n/a   
 
 
-
 
NC_009513  Lreu_0929  ribosomal large subunit pseudouridine synthase D  33.19 
 
 
303 aa  117  3e-25  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1303  pseudouridine synthase, RluA family  29.72 
 
 
314 aa  116  3.9999999999999997e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1591  pseudouridine synthase, RluA family  27.87 
 
 
370 aa  115  6e-25  Ralstonia pickettii 12D  Bacteria  normal  0.150486  decreased coverage  0.00904495 
 
 
-
 
NC_007298  Daro_1604  ribosomal large subunit pseudouridine synthase D  30.26 
 
 
318 aa  115  6e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP0763  ribosomal large subunit pseudouridine synthase D  37.16 
 
 
305 aa  115  6.9999999999999995e-25  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0486  ribosomal large subunit pseudouridine synthase A  29.57 
 
 
337 aa  115  7.999999999999999e-25  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.766955  n/a   
 
 
-
 
NC_003295  RSc1628  ribosomal large subunit pseudouridine synthase D protein  30.53 
 
 
358 aa  114  1.0000000000000001e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1324  ribosomal large subunit pseudouridine synthase D  30.09 
 
 
395 aa  115  1.0000000000000001e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0224168  n/a   
 
 
-
 
NC_007354  Ecaj_0540  ribosomal large subunit pseudouridine synthase D  29.24 
 
 
323 aa  115  1.0000000000000001e-24  Ehrlichia canis str. Jake  Bacteria  normal  0.373783  n/a   
 
 
-
 
NC_007434  BURPS1710b_2333  ribosomal large subunit pseudouridine synthase D  30.09 
 
 
395 aa  115  1.0000000000000001e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  0.93917  n/a   
 
 
-
 
NC_010682  Rpic_1919  pseudouridine synthase, RluA family  27.53 
 
 
370 aa  115  1.0000000000000001e-24  Ralstonia pickettii 12J  Bacteria  normal  0.338974  normal  0.0110313 
 
 
-
 
NC_008836  BMA10229_A0083  RluA family pseudouridine synthase  30.09 
 
 
389 aa  115  1.0000000000000001e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1084  RluA family pseudouridine synthase  30.09 
 
 
389 aa  115  1.0000000000000001e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.346306  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1813  RluA family pseudouridine synthase  30.09 
 
 
389 aa  115  1.0000000000000001e-24  Burkholderia mallei SAVP1  Bacteria  normal  0.587957  n/a   
 
 
-
 
NC_004116  SAG1365  ribosomal large subunit pseudouridine synthase D  27.48 
 
 
296 aa  114  2.0000000000000002e-24  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.00766831  n/a   
 
 
-
 
NC_009074  BURPS668_2168  RluA family pseudouridine synthase  30.09 
 
 
389 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2950  RluA family pseudouridine synthase  28.19 
 
 
323 aa  114  2.0000000000000002e-24  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00118178  normal  0.148942 
 
 
-
 
NC_009076  BURPS1106A_2205  RluA family pseudouridine synthase  30.09 
 
 
395 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0473  RluA family pseudouridine synthase  30.27 
 
 
311 aa  113  3e-24  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1102  RluA family pseudouridine synthase  31.08 
 
 
314 aa  114  3e-24  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_06360  pseudouridine synthase, RluA family  28.91 
 
 
347 aa  113  4.0000000000000004e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.465588  normal  0.220334 
 
 
-
 
NC_011145  AnaeK_4308  pseudouridine synthase, RluA family  26.88 
 
 
323 aa  113  4.0000000000000004e-24  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2363  pseudouridine synthase, RluA family  34.71 
 
 
305 aa  113  4.0000000000000004e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0554  ribosomal large subunit pseudouridine synthase D  29.88 
 
 
296 aa  113  4.0000000000000004e-24  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0069072  n/a   
 
 
-
 
NC_009049  Rsph17029_1072  RluA family pseudouridine synthase  27.57 
 
 
349 aa  113  4.0000000000000004e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0863187  normal  0.714428 
 
 
-
 
NC_008700  Sama_2197  pseudouridylate synthase  33.04 
 
 
224 aa  113  4.0000000000000004e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.111417 
 
 
-
 
NC_009486  Tpet_0458  RluA family pseudouridine synthase  30.61 
 
 
311 aa  113  5e-24  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3499  lysozyme  28.63 
 
 
323 aa  112  5e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  0.847735  normal  0.0395097 
 
 
-
 
NC_010184  BcerKBAB4_3719  RluA family pseudouridine synthase  31.67 
 
 
302 aa  112  8.000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_009654  Mmwyl1_2303  RluA family pseudouridine synthase  36.67 
 
 
323 aa  112  8.000000000000001e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3536  ribosomal large subunit pseudouridine synthase RluD subfamily  28.32 
 
 
342 aa  112  8.000000000000001e-24  Agrobacterium vitis S4  Bacteria  normal  0.618363  n/a   
 
 
-
 
NC_008554  Sfum_3657  RluA family pseudouridine synthase  28.03 
 
 
344 aa  112  9e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0134519  normal 
 
 
-
 
NC_009487  SaurJH9_1256  RluA family pseudouridine synthase  32.42 
 
 
305 aa  112  1.0000000000000001e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1281  RluA family pseudouridine synthase  32.42 
 
 
305 aa  112  1.0000000000000001e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.71357  n/a   
 
 
-
 
NC_007493  RSP_2409  ribosomal large subunit pseudouridine synthase D  29.89 
 
 
349 aa  111  1.0000000000000001e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1612  ribosomal large subunit pseudouridine synthase D  31.58 
 
 
356 aa  111  1.0000000000000001e-23  Methylobacillus flagellatus KT  Bacteria  normal  hitchhiker  0.000933226 
 
 
-
 
NC_008528  OEOE_1079  ribosomal large subunit pseudouridine synthase D  32.05 
 
 
304 aa  111  1.0000000000000001e-23  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3634  ribosomal large subunit pseudouridine synthase D  32.37 
 
 
302 aa  110  2.0000000000000002e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0043574  n/a   
 
 
-
 
NC_009675  Anae109_4321  RluA family pseudouridine synthase  26.55 
 
 
350 aa  111  2.0000000000000002e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.412069 
 
 
-
 
NC_012912  Dd1591_1002  pseudouridine synthase, RluA family  32.79 
 
 
325 aa  111  2.0000000000000002e-23  Dickeya zeae Ech1591  Bacteria  normal  0.550845  n/a   
 
 
-
 
NC_010725  Mpop_0947  pseudouridine synthase, RluA family  30.94 
 
 
345 aa  110  2.0000000000000002e-23  Methylobacterium populi BJ001  Bacteria  normal  normal  0.48756 
 
 
-
 
NC_011206  Lferr_0593  pseudouridine synthase, RluA family  27.46 
 
 
310 aa  110  2.0000000000000002e-23  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.070842  normal 
 
 
-
 
NC_008044  TM1040_2118  ribosomal large subunit pseudouridine synthase D  27.3 
 
 
337 aa  111  2.0000000000000002e-23  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0254  RluA family pseudouridine synthase  27.62 
 
 
316 aa  111  2.0000000000000002e-23  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00128568  normal  0.0139126 
 
 
-
 
NC_012880  Dd703_2850  pseudouridine synthase, RluA family  31.6 
 
 
325 aa  110  2.0000000000000002e-23  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0431  ribosomal large subunit pseudouridine synthase D  27.46 
 
 
319 aa  111  2.0000000000000002e-23  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3937  ribosomal large subunit pseudouridine synthase D  32.37 
 
 
302 aa  110  3e-23  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000762664  n/a   
 
 
-
 
NC_005945  BAS3743  RNA pseudouridylate synthase  32.37 
 
 
302 aa  110  3e-23  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00315275  n/a   
 
 
-
 
NC_006274  BCZK3651  pseudouridylate synthase (pseudouridine synthase)  32.37 
 
 
302 aa  110  3e-23  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000000169242  n/a   
 
 
-
 
NC_010506  Swoo_3722  RluA family pseudouridine synthase  28.14 
 
 
323 aa  110  3e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  0.302376  normal 
 
 
-
 
NC_011658  BCAH187_A3944  ribosomal large subunit pseudouridine synthase, RluA family  32.37 
 
 
302 aa  110  3e-23  Bacillus cereus AH187  Bacteria  unclonable  0.00000000328194  n/a   
 
 
-
 
NC_007633  MCAP_0395  ribosomal large subunit pseudouridine synthase A  29.15 
 
 
322 aa  110  3e-23  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.134097  n/a   
 
 
-
 
NC_011773  BCAH820_3906  ribosomal large subunit pseudouridine synthase, RluA family  32.37 
 
 
302 aa  110  3e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000340417 
 
 
-
 
NC_011725  BCB4264_A3993  ribosomal large subunit pseudouridine synthase, RluA family  32.37 
 
 
302 aa  110  3e-23  Bacillus cereus B4264  Bacteria  decreased coverage  0.000288046  n/a   
 
 
-
 
NC_008346  Swol_1286  pseudouridylate synthase  29.25 
 
 
305 aa  110  3e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00677773  n/a   
 
 
-
 
NC_008576  Mmc1_2132  ribosomal large subunit pseudouridine synthase D  27.72 
 
 
332 aa  110  3e-23  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.864009 
 
 
-
 
NC_009767  Rcas_0282  RluA family pseudouridine synthase  27.74 
 
 
315 aa  110  4.0000000000000004e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.418859  normal 
 
 
-
 
NC_011891  A2cp1_4330  pseudouridine synthase, RluA family  26.43 
 
 
323 aa  110  4.0000000000000004e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01005  23S rRNA pseudouridine synthase D  31.63 
 
 
325 aa  109  5e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008048  Sala_1742  pseudouridine synthase, RluD  31.25 
 
 
376 aa  109  5e-23  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.0441246 
 
 
-
 
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