229 homologs were found in PanDaTox collection
for query gene Huta_0102 on replicon NC_013158
Organism: Halorhabdus utahensis DSM 12940



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013158  Huta_0102  restriction modification system DNA specificity domain protein  100 
 
 
442 aa  900    Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009439  Pmen_0564  restriction modification system DNA specificity subunit  36.69 
 
 
415 aa  207  3e-52  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00017151  decreased coverage  6.20122e-17 
 
 
-
 
NC_007484  Noc_2904  restriction modification system DNA specificity subunit  38.29 
 
 
425 aa  203  6e-51  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0864  restriction modification system DNA specificity domain protein  29 
 
 
413 aa  181  2.9999999999999997e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0689213  n/a   
 
 
-
 
NC_010003  Pmob_1071  restriction modification system DNA specificity subunit  31.69 
 
 
429 aa  167  2e-40  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3075  restriction modification system DNA specificity domain protein  27.54 
 
 
388 aa  154  2e-36  Cyanothece sp. PCC 7425  Bacteria  normal  0.40504  normal 
 
 
-
 
NC_007955  Mbur_1218  restriction modification system DNA specificity subunit  42.31 
 
 
351 aa  149  1.0000000000000001e-34  Methanococcoides burtonii DSM 6242  Archaea  normal  0.67755  n/a   
 
 
-
 
NC_009801  EcE24377A_2910  putative type I restriction-modification system, S subunit  26.12 
 
 
373 aa  145  1e-33  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3989  restriction modification system DNA specificity domain protein  26.74 
 
 
456 aa  142  9.999999999999999e-33  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0737122 
 
 
-
 
NC_009665  Shew185_2194  restriction modification system DNA specificity subunit  34.22 
 
 
427 aa  142  9.999999999999999e-33  Shewanella baltica OS185  Bacteria  normal  0.122675  n/a   
 
 
-
 
NC_013421  Pecwa_1672  restriction modification system DNA specificity domain protein  27.64 
 
 
493 aa  141  1.9999999999999998e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0951  restriction modification system DNA specificity subunit  26.54 
 
 
419 aa  141  3e-32  Psychrobacter cryohalolentis K5  Bacteria  normal  unclonable  0.0000406123 
 
 
-
 
NC_008312  Tery_4472  restriction modification system DNA specificity subunit  27.68 
 
 
415 aa  140  3.9999999999999997e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.270866  normal  0.0902542 
 
 
-
 
NC_008025  Dgeo_2016  restriction modification system DNA specificity subunit  29.62 
 
 
417 aa  136  9e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0839323  normal 
 
 
-
 
NC_009975  MmarC6_0041  restriction modification system DNA specificity subunit  25.44 
 
 
397 aa  135  1.9999999999999998e-30  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007514  Cag_0808  specificity determinant HsdS-like  37.97 
 
 
363 aa  127  5e-28  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.361917  n/a   
 
 
-
 
NC_009523  RoseRS_0735  restriction modification system DNA specificity subunit  26.73 
 
 
392 aa  127  6e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.142305 
 
 
-
 
NC_011206  Lferr_2415  restriction modification system DNA specificity domain  25.36 
 
 
418 aa  124  3e-27  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.589349  normal  0.260014 
 
 
-
 
NC_011761  AFE_2791  type I restriction-modification system, S subunit  25.36 
 
 
418 aa  124  3e-27  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  31.93 
 
 
425 aa  120  4.9999999999999996e-26  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_2176  restriction modification system DNA specificity subunit  40 
 
 
444 aa  120  7e-26  Xylella fastidiosa M23  Bacteria  normal  0.962317  n/a   
 
 
-
 
NC_011071  Smal_1037  restriction modification system DNA specificity domain  34.15 
 
 
364 aa  118  1.9999999999999998e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0890662  normal 
 
 
-
 
NC_010658  SbBS512_E4810  putative type I restriction-modification system specificity subunit  38.99 
 
 
360 aa  117  3e-25  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4042  restriction modification system DNA specificity subunit  24.74 
 
 
428 aa  117  5e-25  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0382  type I restriction-modification system, S subunit  26.1 
 
 
439 aa  116  8.999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002977  MCA0836  type I restriction-modification system S subunit  25.73 
 
 
416 aa  115  2.0000000000000002e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  0.444813  n/a   
 
 
-
 
NC_011726  PCC8801_2988  restriction modification system DNA specificity domain protein  36.02 
 
 
386 aa  115  2.0000000000000002e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_4348  restriction modification system DNA specificity subunit  41.78 
 
 
363 aa  115  2.0000000000000002e-24  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0023  type I restriction-modification system specificity subunit  32.85 
 
 
411 aa  114  3e-24  Mycobacterium sp. MCS  Bacteria  normal  0.834107  n/a   
 
 
-
 
NC_008705  Mkms_0031  type I restriction-modification system specificity subunit  32.85 
 
 
411 aa  114  3e-24  Mycobacterium sp. KMS  Bacteria  normal  0.404176  normal  0.032892 
 
 
-
 
NC_013946  Mrub_2452  restriction modification system DNA specificity domain-containing protein  26.13 
 
 
419 aa  114  5e-24  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.587532 
 
 
-
 
NC_008761  Pnap_4778  restriction modification system DNA specificity subunit  23.28 
 
 
415 aa  112  1.0000000000000001e-23  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.16943  normal 
 
 
-
 
NC_011832  Mpal_1094  restriction modification system DNA specificity domain protein  31.58 
 
 
205 aa  112  2.0000000000000002e-23  Methanosphaerula palustris E1-9c  Archaea  normal  0.0782363  normal  0.473834 
 
 
-
 
NC_008639  Cpha266_1710  restriction modification system DNA specificity subunit  32.91 
 
 
414 aa  112  2.0000000000000002e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2257  restriction endonuclease S subunits-like protein  28.4 
 
 
413 aa  108  1e-22  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0414  restriction modification system DNA specificity subunit  23.53 
 
 
439 aa  108  2e-22  Marinobacter aquaeolei VT8  Bacteria  normal  0.405933  n/a   
 
 
-
 
NC_009921  Franean1_3768  restriction modification system DNA specificity subunit  25.75 
 
 
374 aa  107  3e-22  Frankia sp. EAN1pec  Bacteria  normal  0.36553  normal 
 
 
-
 
NC_011726  PCC8801_2976  restriction modification system DNA specificity domain protein  29.66 
 
 
238 aa  105  1e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_0987  restriction modification system DNA specificity subunit  24.23 
 
 
390 aa  105  2e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05614  type I restriction-modification system S subunit  26.8 
 
 
432 aa  105  2e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_0076  type I restriction-modification system subunit S  26.84 
 
 
464 aa  104  3e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3132  restriction modification system DNA specificity domain protein  25.65 
 
 
424 aa  104  3e-21  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.474681 
 
 
-
 
NC_004578  PSPTO_1087  type I restriction-modification system, S subunit  21.78 
 
 
422 aa  104  4e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.247708  n/a   
 
 
-
 
NC_013440  Hoch_2792  restriction modification system DNA specificity domain protein  26.23 
 
 
423 aa  102  1e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.313089  normal 
 
 
-
 
NC_011899  Hore_04450  restriction modification system DNA specificity domain protein  24.06 
 
 
422 aa  101  3e-20  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0507  restriction modification system DNA specificity subunit  26 
 
 
429 aa  100  4e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0098  restriction endonuclease S subunits  29.97 
 
 
315 aa  100  4e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0006  type I restriction-modification system, S subunit, EcoA family  26.9 
 
 
435 aa  98.2  2e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2682  putative restriction endonuclease S subunit  23.53 
 
 
400 aa  98.2  2e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.845062  normal 
 
 
-
 
NC_010730  SYO3AOP1_0387  restriction modification system DNA specificity domain  22.43 
 
 
435 aa  97.8  3e-19  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0681662  n/a   
 
 
-
 
NC_008532  STER_0750  restriction endonuclease S subunit  23.27 
 
 
387 aa  96.3  9e-19  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0249  restriction modification system DNA specificity subunit  28.99 
 
 
393 aa  95.9  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0500  restriction modification system DNA specificity subunit  25.54 
 
 
413 aa  96.3  1e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.565018  normal 
 
 
-
 
NC_009483  Gura_0549  restriction modification system DNA specificity subunit  23.21 
 
 
385 aa  95.1  2e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0347  type I restriction-modification system, S subunit  23.81 
 
 
390 aa  95.5  2e-18  Campylobacter lari RM2100  Bacteria  hitchhiker  0.00000269296  n/a   
 
 
-
 
NC_009943  Dole_2093  restriction modification system DNA specificity subunit  21.81 
 
 
477 aa  87.4  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1674  restriction modification system DNA specificity domain protein  24.17 
 
 
477 aa  86.7  7e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_0005  restriction modification system DNA specificity domain protein  25.13 
 
 
378 aa  84.7  0.000000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2391  restriction modification system DNA specificity subunit  24.11 
 
 
374 aa  84  0.000000000000004  Marinobacter aquaeolei VT8  Bacteria  normal  0.164769  n/a   
 
 
-
 
NC_011726  PCC8801_2214  restriction modification system DNA specificity domain protein  21.55 
 
 
457 aa  83.2  0.000000000000009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3499  restriction modification system DNA specificity subunit  31.95 
 
 
405 aa  82.8  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.082109 
 
 
-
 
NC_008740  Maqu_0233  restriction modification system DNA specificity subunit  24.63 
 
 
461 aa  82.4  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.0967889  n/a   
 
 
-
 
NC_008786  Veis_3549  restriction modification system DNA specificity subunit  25.44 
 
 
296 aa  82  0.00000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.348533  normal 
 
 
-
 
NC_008789  Hhal_1153  restriction modification system DNA specificity subunit  24.4 
 
 
429 aa  80.5  0.00000000000005  Halorhodospira halophila SL1  Bacteria  normal  0.487263  n/a   
 
 
-
 
NC_013161  Cyan8802_2277  restriction modification system DNA specificity domain protein  24.1 
 
 
433 aa  80.5  0.00000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  0.200455  hitchhiker  0.00000677276 
 
 
-
 
NC_010730  SYO3AOP1_1357  restriction modification system DNA specificity domain  22.46 
 
 
425 aa  80.1  0.00000000000007  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0971497  n/a   
 
 
-
 
NC_013204  Elen_1516  restriction modification system DNA specificity subunit  19.66 
 
 
395 aa  80.1  0.00000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.205219 
 
 
-
 
NC_010003  Pmob_1897  restriction modification system DNA specificity subunit  22.38 
 
 
433 aa  79.7  0.0000000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0607  restriction modification system DNA specificity subunit  22.22 
 
 
438 aa  78.6  0.0000000000002  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009565  TBFG_12768  type I restriction/modification system specificity determinant hsdS.1  45 
 
 
91 aa  78.2  0.0000000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4012  restriction modification system DNA specificity subunit  26.44 
 
 
436 aa  77.4  0.0000000000004  Frankia sp. CcI3  Bacteria  normal  0.848484  normal  0.567977 
 
 
-
 
NC_008261  CPF_2598  type I restriction-modification enzyme, S subunit  25.55 
 
 
417 aa  77.8  0.0000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0133376  n/a   
 
 
-
 
NC_013440  Hoch_5008  Restriction endonuclease S subunits-like protein  23.71 
 
 
465 aa  77.4  0.0000000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.441656 
 
 
-
 
NC_009012  Cthe_1144  restriction modification system DNA specificity subunit  23.94 
 
 
473 aa  77.8  0.0000000000004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0944  restriction modification system DNA specificity subunit  23.95 
 
 
420 aa  77  0.0000000000007  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00000962716  n/a   
 
 
-
 
NC_009049  Rsph17029_1858  restriction modification system DNA specificity subunit  21.87 
 
 
456 aa  76.3  0.000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01116  hypothetical protein  18.52 
 
 
400 aa  75.5  0.000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A2665  type I restriction-modification system specificity subunit  22.52 
 
 
446 aa  74.7  0.000000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0650221  normal  0.332066 
 
 
-
 
NC_009438  Sputcn32_0160  restriction modification system DNA specificity subunit  24.15 
 
 
399 aa  75.1  0.000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2743  type I restriction-modification system, S subunit, truncation  24.86 
 
 
175 aa  74.3  0.000000000004  Treponema denticola ATCC 35405  Bacteria  normal  0.441032  n/a   
 
 
-
 
NC_002977  MCA1890  type I restriction-modification system, S subunit  24.74 
 
 
416 aa  72  0.00000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3653  type I restriction enzyme StySPI specificity protein  26.58 
 
 
460 aa  72  0.00000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.234587  normal  0.701676 
 
 
-
 
NC_007644  Moth_1671  restriction modification system DNA specificity subunit  22.19 
 
 
442 aa  71.2  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.517259  hitchhiker  0.00037426 
 
 
-
 
NC_008599  CFF8240_0988  type I restriction-modification system, S subunit  22.86 
 
 
401 aa  71.2  0.00000000004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.271922  n/a   
 
 
-
 
NC_011059  Paes_0308  restriction modification system DNA specificity domain  20.81 
 
 
456 aa  71.2  0.00000000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0548885  normal  0.428283 
 
 
-
 
NC_012794  GWCH70_3443  restriction modification system DNA specificity domain protein  21.38 
 
 
445 aa  70.5  0.00000000006  Geobacillus sp. WCH70  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0959  restriction modification system DNA specificity domain protein  23.96 
 
 
442 aa  69.7  0.00000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2926  restriction modification system DNA specificity subunit  26.01 
 
 
434 aa  69.7  0.0000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3352  type I site-specific deoxyribonuclease S subunit  26.15 
 
 
303 aa  69.3  0.0000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.0000513186  normal  0.0100815 
 
 
-
 
NC_007355  Mbar_A1015  hypothetical protein  22.25 
 
 
477 aa  68.2  0.0000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010085  Nmar_0605  restriction modification system DNA specificity subunit  24.84 
 
 
453 aa  68.2  0.0000000003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009523  RoseRS_2689  restriction modification system DNA specificity subunit  21.43 
 
 
290 aa  66.6  0.0000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.841682  normal 
 
 
-
 
NC_010718  Nther_1991  restriction modification system DNA specificity domain  24.5 
 
 
490 aa  66.6  0.0000000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.120232  normal  0.112136 
 
 
-
 
NC_007796  Mhun_2785  type I restriction enzyme EcoR124II specificity protein  33.33 
 
 
121 aa  66.6  0.0000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.302167 
 
 
-
 
NC_007520  Tcr_0333  restriction modification system DNA specificity subunit  24.44 
 
 
371 aa  65.5  0.000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3358  restriction modification system DNA specificity subunit  24.56 
 
 
429 aa  65.5  0.000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0521612  normal 
 
 
-
 
NC_009135  MmarC5_0615  restriction modification system DNA specificity subunit  25.32 
 
 
417 aa  65.1  0.000000002  Methanococcus maripaludis C5  Archaea  normal  0.0545068  n/a   
 
 
-
 
NC_009135  MmarC5_0640  restriction modification system DNA specificity subunit  21.56 
 
 
447 aa  65.5  0.000000002  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_013515  Smon_0658  restriction modification system DNA specificity domain protein  20.31 
 
 
473 aa  64.7  0.000000003  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_3351  type I site-specific deoxyribonuclease S subunit  21.75 
 
 
354 aa  65.1  0.000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00146581  normal  0.0102246 
 
 
-
 
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