More than 300 homologs were found in PanDaTox collection
for query gene Hoch_6804 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6804  putative transcriptional regulator, Crp/Fnr family  100 
 
 
238 aa  483  1e-135  Haliangium ochraceum DSM 14365  Bacteria  normal  0.743669  normal  0.223692 
 
 
-
 
NC_013440  Hoch_6450  putative transcriptional regulator, Crp/Fnr family  49.04 
 
 
253 aa  206  2e-52  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5645  putative transcriptional regulator, Crp/Fnr family  42.65 
 
 
240 aa  163  2.0000000000000002e-39  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1256  cyclic nucleotide-binding domain-containing protein  33.65 
 
 
215 aa  105  6e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2607  cyclic nucleotide-binding protein  32.7 
 
 
215 aa  100  2e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2700  cyclic nucleotide-binding protein  32.7 
 
 
215 aa  99.8  4e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.00108848  n/a   
 
 
-
 
NC_014248  Aazo_3761  putative Crp/Fnr family transcriptional regulator  30.05 
 
 
227 aa  98.6  7e-20  'Nostoc azollae' 0708  Bacteria  normal  0.0509841  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  31.67 
 
 
225 aa  97.8  1e-19  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  30.98 
 
 
227 aa  96.3  3e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_014150  Bmur_0098  putative transcriptional regulator, Crp/Fnr family  31.38 
 
 
211 aa  95.9  5e-19  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  4.4392599999999995e-22  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  33.67 
 
 
225 aa  93.2  3e-18  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  32.97 
 
 
225 aa  93.6  3e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  31.84 
 
 
232 aa  80.5  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  35.03 
 
 
252 aa  80.5  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  31.84 
 
 
232 aa  79.7  0.00000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  36.36 
 
 
225 aa  79  0.00000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  36.36 
 
 
225 aa  78.6  0.00000000000009  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1037  cyclic nucleotide-binding protein  29.94 
 
 
227 aa  77  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.272663 
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  27.78 
 
 
227 aa  75.5  0.0000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  27.22 
 
 
243 aa  73.9  0.000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.71 
 
 
219 aa  73.6  0.000000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011884  Cyan7425_4893  cyclic nucleotide-binding protein  34.58 
 
 
237 aa  72  0.000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  32.8 
 
 
225 aa  71.2  0.00000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_002967  TDE0067  cyclic nucleotide-binding protein  28.24 
 
 
415 aa  70.5  0.00000000002  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3296  transcriptional regulator, Crp/Fnr family  26.7 
 
 
229 aa  70.9  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  0.721133  normal  0.844961 
 
 
-
 
NC_011726  PCC8801_2804  cyclic nucleotide-binding protein  26.7 
 
 
229 aa  70.9  0.00000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1533  transcriptional regulator, Crp/Fnr family  29.32 
 
 
231 aa  68.9  0.00000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  26.26 
 
 
223 aa  67  0.0000000002  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  31.75 
 
 
228 aa  67.4  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32 
 
 
226 aa  66.6  0.0000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  31.68 
 
 
226 aa  66.6  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  32.35 
 
 
224 aa  66.6  0.0000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  32.23 
 
 
228 aa  67  0.0000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_002967  TDE2616  cyclic nucleotide-binding protein  25.93 
 
 
219 aa  66.2  0.0000000004  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  28.73 
 
 
223 aa  66.2  0.0000000004  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  28.09 
 
 
212 aa  66.2  0.0000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  31.07 
 
 
234 aa  66.2  0.0000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013440  Hoch_5417  cyclic nucleotide-binding protein  37.21 
 
 
419 aa  66.2  0.0000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0881735  normal  0.0681678 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  32.54 
 
 
228 aa  66.2  0.0000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  34.62 
 
 
224 aa  65.9  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  31.75 
 
 
226 aa  65.5  0.0000000007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.71 
 
 
224 aa  65.5  0.0000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  30.58 
 
 
242 aa  65.1  0.0000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  32.41 
 
 
147 aa  64.7  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  30.99 
 
 
225 aa  64.7  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  29.77 
 
 
225 aa  64.3  0.000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  29.77 
 
 
225 aa  63.9  0.000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  36.8 
 
 
224 aa  64.3  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  33.06 
 
 
224 aa  63.5  0.000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_008820  P9303_28321  putative regulatory protein  28.66 
 
 
231 aa  63.5  0.000000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.270503 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  30.56 
 
 
220 aa  62.8  0.000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_008554  Sfum_4027  cyclic nucleotide-binding protein  40 
 
 
413 aa  63.2  0.000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8335  putative transcriptional regulator, Crp/Fnr family  39.78 
 
 
209 aa  62.8  0.000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.339186  normal 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  30.95 
 
 
226 aa  62.8  0.000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  31.75 
 
 
225 aa  62.4  0.000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  26.67 
 
 
250 aa  62.4  0.000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  32.31 
 
 
224 aa  62.4  0.000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_013730  Slin_5025  putative transcriptional regulator, Crp/Fnr family  33.64 
 
 
1056 aa  61.6  0.00000001  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.00524189  normal 
 
 
-
 
NC_014248  Aazo_1954  putative Crp/Fnr family transcriptional regulator  34.02 
 
 
141 aa  61.6  0.00000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  28.41 
 
 
223 aa  61.6  0.00000001  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_012918  GM21_1866  putative transcriptional regulator, Crp/Fnr family  36.22 
 
 
182 aa  61.2  0.00000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_4460  putative transcriptional regulator, Crp/Fnr family  35.9 
 
 
171 aa  60.5  0.00000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0496  cyclic nucleotide-binding domain-containing protein  33.93 
 
 
129 aa  60.8  0.00000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.22 
 
 
254 aa  60.5  0.00000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3719  transcriptional regulator, Crp/Fnr family  25.56 
 
 
227 aa  60.5  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.851339  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  33.85 
 
 
224 aa  60.8  0.00000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  29.23 
 
 
224 aa  60.1  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_011726  PCC8801_2732  cyclic nucleotide-binding protein  31.54 
 
 
425 aa  60.1  0.00000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3370  putative transcriptional regulator, Crp/Fnr family  31.54 
 
 
425 aa  60.1  0.00000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  30.39 
 
 
230 aa  60.1  0.00000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  28.04 
 
 
222 aa  60.1  0.00000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.81 
 
 
243 aa  59.7  0.00000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  31.37 
 
 
563 aa  59.7  0.00000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  30.58 
 
 
220 aa  59.7  0.00000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  32.35 
 
 
226 aa  59.3  0.00000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  31.76 
 
 
226 aa  59.3  0.00000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  23.23 
 
 
236 aa  59.3  0.00000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  31.54 
 
 
224 aa  58.9  0.00000007  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_013440  Hoch_4086  putative transcriptional regulator, Crp/Fnr family  34 
 
 
209 aa  58.5  0.00000008  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0944516 
 
 
-
 
NC_011901  Tgr7_2797  cAMP-regulatory protein  30 
 
 
198 aa  58.5  0.00000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.207531  n/a   
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  28.97 
 
 
155 aa  58.5  0.00000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.331754 
 
 
-
 
NC_009523  RoseRS_2624  cyclic nucleotide-binding protein  33.03 
 
 
1177 aa  57.8  0.0000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  28.44 
 
 
225 aa  58.2  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013093  Amir_5783  transcriptional regulator, Crp/Fnr family  27.53 
 
 
212 aa  58.5  0.0000001  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00268451  n/a   
 
 
-
 
NC_007604  Synpcc7942_1814  cyclic nucleotide-binding domain-containing protein  33.04 
 
 
242 aa  58.2  0.0000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.38579  normal  0.245711 
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  32.41 
 
 
151 aa  58.2  0.0000001  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  32.31 
 
 
224 aa  57.8  0.0000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  31.68 
 
 
570 aa  58.2  0.0000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  32.31 
 
 
224 aa  57.8  0.0000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_009943  Dole_1878  cyclic nucleotide-binding protein  38.16 
 
 
275 aa  57.8  0.0000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.116046  n/a   
 
 
-
 
NC_007413  Ava_3692  cyclic nucleotide-binding domain-containing protein  32.65 
 
 
146 aa  57.4  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_2514  Crp/FNR family transcriptional regulator  28.05 
 
 
231 aa  57  0.0000002  Synechococcus sp. CC9605  Bacteria  normal  normal  0.619242 
 
 
-
 
NC_011726  PCC8801_0890  transcriptional regulator, Crp/Fnr family  28.73 
 
 
235 aa  57.4  0.0000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  31.54 
 
 
224 aa  57.8  0.0000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013161  Cyan8802_0916  transcriptional regulator, Crp/Fnr family  28.73 
 
 
235 aa  57.4  0.0000002  Cyanothece sp. PCC 8802  Bacteria  normal  0.18169  normal 
 
 
-
 
NC_009720  Xaut_1772  cyclic nucleotide-binding protein  28.7 
 
 
161 aa  57.4  0.0000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0691544 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  28.36 
 
 
231 aa  57.4  0.0000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  28.23 
 
 
228 aa  57.8  0.0000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  31.54 
 
 
224 aa  56.6  0.0000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  25.42 
 
 
249 aa  57  0.0000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
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