More than 300 homologs were found in PanDaTox collection
for query gene Hoch_6548 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
397 aa  806    Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  46.23 
 
 
395 aa  310  2e-83  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  39.47 
 
 
367 aa  228  1e-58  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  34.13 
 
 
374 aa  204  2e-51  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  34.13 
 
 
374 aa  204  2e-51  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  32.95 
 
 
437 aa  195  1e-48  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  32.28 
 
 
383 aa  191  1e-47  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  31.64 
 
 
440 aa  190  5e-47  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  32.59 
 
 
407 aa  187  3e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_007517  Gmet_2712  response regulator receiver sensor signal transduction histidine kinase  31.26 
 
 
414 aa  184  3e-45  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  31.38 
 
 
440 aa  182  7e-45  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  48.45 
 
 
566 aa  181  2e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_007517  Gmet_2790  response regulator receiver sensor signal transduction histidine kinase  29.98 
 
 
463 aa  176  4e-43  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  31.43 
 
 
363 aa  176  7e-43  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2639  response regulator receiver sensor signal transduction histidine kinase  31.7 
 
 
396 aa  175  9.999999999999999e-43  Geobacter metallireducens GS-15  Bacteria  normal  0.136447  normal  0.717158 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  35.75 
 
 
386 aa  174  1.9999999999999998e-42  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  30.88 
 
 
437 aa  173  3.9999999999999995e-42  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  53.33 
 
 
337 aa  172  7.999999999999999e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  31.91 
 
 
383 aa  172  1e-41  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3976  response regulator receiver Signal transduction histidine kinase  33.57 
 
 
431 aa  172  1e-41  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0119459  decreased coverage  0.00202838 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  32.1 
 
 
441 aa  172  1e-41  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  30.61 
 
 
452 aa  172  1e-41  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  35.2 
 
 
386 aa  172  1e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  32.39 
 
 
383 aa  172  1e-41  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  30.12 
 
 
395 aa  170  3e-41  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  30.12 
 
 
395 aa  170  3e-41  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  32.38 
 
 
1691 aa  169  6e-41  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2687  response regulator receiver sensor signal transduction histidine kinase  30.08 
 
 
1013 aa  169  7e-41  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.70216  normal 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  29.11 
 
 
443 aa  169  1e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_013440  Hoch_3251  response regulator receiver sensor signal transduction histidine kinase  31.86 
 
 
418 aa  169  1e-40  Haliangium ochraceum DSM 14365  Bacteria  normal  0.35487  normal  0.0265543 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  33.18 
 
 
441 aa  168  1e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_3898  multi-sensor signal transduction histidine kinase  32.4 
 
 
1003 aa  167  2.9999999999999998e-40  Polaromonas sp. JS666  Bacteria  normal  0.504038  normal  0.0804481 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  57.42 
 
 
541 aa  167  2.9999999999999998e-40  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  29.95 
 
 
384 aa  167  4e-40  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_013216  Dtox_3783  histidine kinase  30.77 
 
 
544 aa  166  8e-40  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.401083  normal 
 
 
-
 
NC_013132  Cpin_3745  response regulator receiver sensor signal transduction histidine kinase  28.39 
 
 
1010 aa  164  2.0000000000000002e-39  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.412805  hitchhiker  0.00597184 
 
 
-
 
NC_009441  Fjoh_3355  response regulator receiver sensor signal transduction histidine kinase  30.15 
 
 
405 aa  164  3e-39  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  32.41 
 
 
378 aa  164  3e-39  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  49.38 
 
 
488 aa  164  4.0000000000000004e-39  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  34.75 
 
 
395 aa  163  4.0000000000000004e-39  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  57.42 
 
 
541 aa  163  6e-39  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  31.35 
 
 
376 aa  162  7e-39  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  30.31 
 
 
374 aa  161  2e-38  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2262  response regulator receiver sensor signal transduction histidine kinase  33.08 
 
 
406 aa  160  5e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.146487 
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  31.09 
 
 
396 aa  158  2e-37  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  53.21 
 
 
553 aa  157  2e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.914679 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  53.42 
 
 
200 aa  155  1e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  32.15 
 
 
372 aa  153  7e-36  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  52.45 
 
 
301 aa  152  8e-36  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  53.25 
 
 
202 aa  151  2e-35  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_011146  Gbem_1642  response regulator receiver sensor signal transduction histidine kinase  27.83 
 
 
406 aa  151  2e-35  Geobacter bemidjiensis Bem  Bacteria  normal  0.905013  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  58.06 
 
 
222 aa  150  3e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_013132  Cpin_0324  response regulator receiver sensor signal transduction histidine kinase  28.57 
 
 
424 aa  150  3e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.046409  normal 
 
 
-
 
NC_012918  GM21_2571  response regulator receiver sensor signal transduction histidine kinase  28.12 
 
 
406 aa  150  4e-35  Geobacter sp. M21  Bacteria  n/a    normal  0.156881 
 
 
-
 
NC_007947  Mfla_2590  response regulator receiver sensor signal transduction histidine kinase  31.02 
 
 
405 aa  149  9e-35  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.413696 
 
 
-
 
NC_013132  Cpin_2260  response regulator receiver sensor signal transduction histidine kinase  31.03 
 
 
361 aa  147  2.0000000000000003e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.208609  normal 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  30.08 
 
 
355 aa  146  6e-34  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  31.27 
 
 
395 aa  146  7.0000000000000006e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  30.19 
 
 
348 aa  144  3e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3767  response regulator receiver sensor hybrid histidine kinase  29.5 
 
 
587 aa  142  9e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.634012  normal 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  48.39 
 
 
361 aa  142  9.999999999999999e-33  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  31.17 
 
 
393 aa  142  1.9999999999999998e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_008025  Dgeo_2179  multi-sensor signal transduction histidine kinase  36.29 
 
 
710 aa  141  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.312055 
 
 
-
 
NC_008576  Mmc1_3693  histidine kinase  27.65 
 
 
667 aa  141  1.9999999999999998e-32  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1029  response regulator receiver sensor signal transduction histidine kinase  31.85 
 
 
371 aa  140  3e-32  Spirosoma linguale DSM 74  Bacteria  normal  0.040723  normal 
 
 
-
 
NC_011884  Cyan7425_4608  multi-sensor signal transduction histidine kinase  28.26 
 
 
1645 aa  140  3e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.284957  normal  0.407853 
 
 
-
 
NC_012791  Vapar_2802  response regulator receiver sensor signal transduction histidine kinase  31.12 
 
 
406 aa  140  3e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  48.3 
 
 
305 aa  140  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  29.64 
 
 
369 aa  140  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  41.34 
 
 
314 aa  140  3.9999999999999997e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  48.41 
 
 
303 aa  140  4.999999999999999e-32  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  56.56 
 
 
311 aa  140  4.999999999999999e-32  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  29.56 
 
 
384 aa  140  4.999999999999999e-32  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_008781  Pnap_1070  response regulator receiver sensor signal transduction histidine kinase  28.86 
 
 
402 aa  140  4.999999999999999e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.947697  normal  0.86399 
 
 
-
 
NC_011832  Mpal_2461  PAS/PAC sensor signal transduction histidine kinase  34.43 
 
 
575 aa  139  7e-32  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  44.59 
 
 
353 aa  139  8.999999999999999e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  27.92 
 
 
396 aa  138  1e-31  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  51.91 
 
 
306 aa  139  1e-31  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  48.03 
 
 
309 aa  138  1e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.15819 
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  29.28 
 
 
417 aa  138  2e-31  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_002967  TDE0492  sensor histidine kinase/response regulator  30.53 
 
 
369 aa  138  2e-31  Treponema denticola ATCC 35405  Bacteria  normal  0.189978  n/a   
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  31.08 
 
 
393 aa  138  2e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_009523  RoseRS_0317  response regulator receiver sensor signal transduction histidine kinase  29.15 
 
 
407 aa  138  2e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.294431  normal  0.0468502 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  29.66 
 
 
386 aa  138  2e-31  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  48.3 
 
 
309 aa  138  2e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  55.08 
 
 
292 aa  138  2e-31  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_013440  Hoch_5143  response regulator receiver sensor signal transduction histidine kinase  29.98 
 
 
408 aa  138  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19932  normal 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  53.23 
 
 
356 aa  138  2e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0593  response regulator receiver sensor signal transduction histidine kinase  27.62 
 
 
397 aa  137  3.0000000000000003e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.177467  n/a   
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  42.86 
 
 
593 aa  137  3.0000000000000003e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  42.86 
 
 
593 aa  137  3.0000000000000003e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  45.95 
 
 
361 aa  137  4e-31  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  27.92 
 
 
396 aa  137  4e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  52.46 
 
 
304 aa  137  5e-31  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  55.56 
 
 
316 aa  136  7.000000000000001e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  49.64 
 
 
302 aa  135  9e-31  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  47.26 
 
 
338 aa  135  9e-31  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  28.53 
 
 
374 aa  135  9e-31  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2649  response regulator receiver Signal transduction histidine kinase  28.9 
 
 
404 aa  135  9.999999999999999e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.699737 
 
 
-
 
NC_014148  Plim_3061  ATP-binding region ATPase domain protein  29.21 
 
 
863 aa  135  9.999999999999999e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.141845  n/a   
 
 
-
 
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