More than 300 homologs were found in PanDaTox collection
for query gene Hoch_6450 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_6450  putative transcriptional regulator, Crp/Fnr family  100 
 
 
253 aa  521  1e-147  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6804  putative transcriptional regulator, Crp/Fnr family  49.04 
 
 
238 aa  206  2e-52  Haliangium ochraceum DSM 14365  Bacteria  normal  0.743669  normal  0.223692 
 
 
-
 
NC_013440  Hoch_5645  putative transcriptional regulator, Crp/Fnr family  42.47 
 
 
240 aa  171  1e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1256  cyclic nucleotide-binding domain-containing protein  32.85 
 
 
215 aa  108  7.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2607  cyclic nucleotide-binding protein  32.37 
 
 
215 aa  104  1e-21  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2700  cyclic nucleotide-binding protein  32.37 
 
 
215 aa  103  3e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.00108848  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  38.61 
 
 
225 aa  102  5e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  38.61 
 
 
225 aa  102  5e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  31.03 
 
 
225 aa  91.3  1e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  27.93 
 
 
225 aa  91.3  1e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0098  putative transcriptional regulator, Crp/Fnr family  27.13 
 
 
211 aa  89.7  3e-17  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  4.4392599999999995e-22  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  32.58 
 
 
225 aa  87.8  2e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_002967  TDE2616  cyclic nucleotide-binding protein  29.55 
 
 
219 aa  87  3e-16  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  31.34 
 
 
225 aa  86.7  3e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  36.09 
 
 
228 aa  82.8  0.000000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  34.07 
 
 
228 aa  82.4  0.000000000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  29.35 
 
 
227 aa  82  0.000000000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  28.64 
 
 
224 aa  81.3  0.00000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  28.71 
 
 
224 aa  81.3  0.00000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  34.35 
 
 
225 aa  80.9  0.00000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  32.3 
 
 
224 aa  80.5  0.00000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  31.55 
 
 
226 aa  80.9  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  33.33 
 
 
226 aa  80.1  0.00000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  26.26 
 
 
243 aa  79.7  0.00000000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  31.85 
 
 
225 aa  79.3  0.00000000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  29.77 
 
 
224 aa  79.3  0.00000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.65 
 
 
220 aa  79  0.00000000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_014248  Aazo_3761  putative Crp/Fnr family transcriptional regulator  28.95 
 
 
227 aa  78.6  0.00000000000009  'Nostoc azollae' 0708  Bacteria  normal  0.0509841  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  35.16 
 
 
228 aa  78.2  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  27.53 
 
 
219 aa  77.8  0.0000000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  28.5 
 
 
236 aa  77.8  0.0000000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_011884  Cyan7425_4893  cyclic nucleotide-binding protein  30.48 
 
 
237 aa  77.8  0.0000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  29.15 
 
 
224 aa  77  0.0000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  28.5 
 
 
236 aa  77.4  0.0000000000002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  31.82 
 
 
226 aa  76.6  0.0000000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008312  Tery_1037  cyclic nucleotide-binding protein  29.94 
 
 
227 aa  77  0.0000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.272663 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.06 
 
 
242 aa  77  0.0000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  28.64 
 
 
224 aa  76.3  0.0000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  28.64 
 
 
224 aa  76.3  0.0000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  32.58 
 
 
226 aa  75.9  0.0000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  27.18 
 
 
225 aa  75.9  0.0000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  32.58 
 
 
224 aa  75.1  0.0000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0067  cyclic nucleotide-binding protein  28.16 
 
 
415 aa  75.1  0.0000000000009  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  34.31 
 
 
224 aa  75.5  0.0000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  28.14 
 
 
224 aa  75.1  0.000000000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  28.14 
 
 
224 aa  75.1  0.000000000001  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  28.14 
 
 
224 aa  75.1  0.000000000001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_013440  Hoch_5417  cyclic nucleotide-binding protein  33.33 
 
 
419 aa  72.8  0.000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0881735  normal  0.0681678 
 
 
-
 
NC_009439  Pmen_1780  cyclic nucleotide-binding protein  38.53 
 
 
156 aa  72.8  0.000000000005  Pseudomonas mendocina ymp  Bacteria  normal  0.489231  normal 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  27.53 
 
 
235 aa  72  0.000000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  25.42 
 
 
231 aa  72  0.000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008390  Bamb_2589  Crp/FNR family transcriptional regulator  27.53 
 
 
235 aa  72  0.000000000008  Burkholderia ambifaria AMMD  Bacteria  normal  0.0679634  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  30.37 
 
 
224 aa  72  0.000000000009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  27.37 
 
 
225 aa  71.2  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009943  Dole_1878  cyclic nucleotide-binding protein  31.76 
 
 
275 aa  71.6  0.00000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.116046  n/a   
 
 
-
 
NC_008346  Swol_1598  hypothetical protein  34.23 
 
 
407 aa  71.6  0.00000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.303519  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  28.89 
 
 
225 aa  71.2  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  30.3 
 
 
224 aa  70.9  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  30.17 
 
 
232 aa  70.5  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3692  cyclic nucleotide-binding domain-containing protein  35.9 
 
 
146 aa  70.5  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  28.89 
 
 
226 aa  70.9  0.00000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  28 
 
 
224 aa  71.2  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  30.38 
 
 
225 aa  70.5  0.00000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  28.15 
 
 
226 aa  70.1  0.00000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  29.44 
 
 
232 aa  70.1  0.00000000003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  26.79 
 
 
236 aa  70.5  0.00000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_014248  Aazo_1954  putative Crp/Fnr family transcriptional regulator  35.51 
 
 
141 aa  69.7  0.00000000004  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  26.4 
 
 
212 aa  69.7  0.00000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  34.97 
 
 
241 aa  69.7  0.00000000005  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1929  Crp/FNR family transcriptional regulator  26.4 
 
 
235 aa  69.3  0.00000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.589711  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  26.79 
 
 
236 aa  69.7  0.00000000005  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008312  Tery_2905  cyclic nucleotide-binding protein  35.51 
 
 
157 aa  69.7  0.00000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0600936 
 
 
-
 
NC_008542  Bcen2424_2541  Crp/FNR family transcriptional regulator  26.4 
 
 
235 aa  69.3  0.00000000005  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000812643  n/a   
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  26.4 
 
 
235 aa  69.3  0.00000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  30.08 
 
 
228 aa  69.3  0.00000000006  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  28.49 
 
 
222 aa  68.9  0.00000000007  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_002967  TDE2725  cyclic nucleotide binding/GGDEF domain-containing protein  33.03 
 
 
322 aa  68.9  0.00000000008  Treponema denticola ATCC 35405  Bacteria  normal  0.792666  n/a   
 
 
-
 
NC_010501  PputW619_3891  cyclic nucleotide-binding protein  36.11 
 
 
155 aa  68.6  0.0000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  31.69 
 
 
251 aa  68.2  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.27 
 
 
225 aa  67.8  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  25 
 
 
227 aa  67.4  0.0000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007510  Bcep18194_A5872  Crp/FNR family transcriptional regulator  27.01 
 
 
235 aa  67.4  0.0000000002  Burkholderia sp. 383  Bacteria  normal  0.142608  normal  0.264846 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  25.73 
 
 
229 aa  67.4  0.0000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_010084  Bmul_0755  Crp/FNR family transcriptional regulator  28 
 
 
235 aa  67.4  0.0000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.027549  normal  0.149867 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  25.14 
 
 
240 aa  67.4  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  22.44 
 
 
227 aa  67.4  0.0000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0841  cyclic nucleotide-binding protein  34.55 
 
 
160 aa  67.4  0.0000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.108052 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  24.72 
 
 
231 aa  66.6  0.0000000003  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  25.7 
 
 
232 aa  67  0.0000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_007005  Psyr_1573  cyclic nucleotide-binding  33.04 
 
 
158 aa  66.2  0.0000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.490025  hitchhiker  0.00990577 
 
 
-
 
NC_007492  Pfl01_1398  cyclic nucleotide-binding protein  32.17 
 
 
157 aa  66.6  0.0000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.908167  normal 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  30.23 
 
 
234 aa  66.6  0.0000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  34.97 
 
 
246 aa  66.6  0.0000000004  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  26.4 
 
 
267 aa  66.2  0.0000000004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  28.29 
 
 
222 aa  66.2  0.0000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  28.33 
 
 
234 aa  65.9  0.0000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_009675  Anae109_3203  cyclic nucleotide-binding protein  33.93 
 
 
165 aa  65.9  0.0000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0388  cAMP-regulatory protein  25.27 
 
 
212 aa  65.9  0.0000000006  Psychromonas ingrahamii 37  Bacteria  normal  0.0189183  normal 
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  30.77 
 
 
563 aa  65.9  0.0000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  25.88 
 
 
252 aa  65.5  0.0000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
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