More than 300 homologs were found in PanDaTox collection
for query gene Hoch_2081 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  100 
 
 
229 aa  462  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  33.63 
 
 
226 aa  146  3e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  34.26 
 
 
225 aa  134  9.999999999999999e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  33.8 
 
 
225 aa  133  1.9999999999999998e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  32.27 
 
 
225 aa  131  9e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  31.82 
 
 
225 aa  131  1.0000000000000001e-29  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  36.06 
 
 
230 aa  128  7.000000000000001e-29  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  34.25 
 
 
225 aa  127  2.0000000000000002e-28  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  35.02 
 
 
225 aa  124  2e-27  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  32.88 
 
 
225 aa  123  3e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  33.49 
 
 
224 aa  123  3e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  32.7 
 
 
220 aa  122  4e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.75 
 
 
224 aa  122  6e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.64 
 
 
227 aa  122  6e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  30.77 
 
 
226 aa  120  9.999999999999999e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  31.22 
 
 
226 aa  120  1.9999999999999998e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  33.16 
 
 
225 aa  119  3e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.56 
 
 
242 aa  119  4.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  31.02 
 
 
225 aa  118  6e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  33.33 
 
 
234 aa  118  7e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  30.41 
 
 
235 aa  118  7.999999999999999e-26  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  31.44 
 
 
243 aa  118  7.999999999999999e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.56 
 
 
225 aa  118  7.999999999999999e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  33.68 
 
 
226 aa  118  9e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  32.87 
 
 
228 aa  118  9e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  30.23 
 
 
224 aa  118  9e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  31.86 
 
 
224 aa  117  9.999999999999999e-26  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  29.77 
 
 
225 aa  116  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  31.63 
 
 
224 aa  116  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  32.56 
 
 
224 aa  116  3e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  31.48 
 
 
231 aa  115  3.9999999999999997e-25  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  31.16 
 
 
226 aa  115  6e-25  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  30.88 
 
 
224 aa  114  1.0000000000000001e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  30.88 
 
 
224 aa  114  1.0000000000000001e-24  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  30.88 
 
 
224 aa  114  1.0000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  30.88 
 
 
224 aa  114  1.0000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  30.23 
 
 
224 aa  113  2.0000000000000002e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  32.56 
 
 
225 aa  114  2.0000000000000002e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  30.88 
 
 
224 aa  113  2.0000000000000002e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  30.32 
 
 
243 aa  112  3e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  33.33 
 
 
222 aa  112  3e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  34.27 
 
 
222 aa  112  5e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  33.33 
 
 
254 aa  112  7.000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  31.65 
 
 
228 aa  111  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.94 
 
 
228 aa  111  1.0000000000000001e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  30.59 
 
 
226 aa  110  2.0000000000000002e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  31.86 
 
 
224 aa  109  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  32.63 
 
 
226 aa  109  3e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  31.63 
 
 
226 aa  108  5e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  30.59 
 
 
236 aa  108  7.000000000000001e-23  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  28.77 
 
 
251 aa  108  8.000000000000001e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  30.88 
 
 
224 aa  107  1e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  30.14 
 
 
236 aa  107  1e-22  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  33.51 
 
 
235 aa  107  2e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  31.6 
 
 
236 aa  105  5e-22  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  31.37 
 
 
225 aa  105  5e-22  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  30.97 
 
 
246 aa  105  5e-22  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  33.52 
 
 
239 aa  105  7e-22  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  30.88 
 
 
225 aa  105  7e-22  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  31.82 
 
 
246 aa  104  9e-22  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  29.3 
 
 
232 aa  104  1e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  31.16 
 
 
225 aa  103  2e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  31.94 
 
 
231 aa  103  2e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  30.97 
 
 
263 aa  103  2e-21  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  28.57 
 
 
239 aa  103  2e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  30.23 
 
 
225 aa  103  2e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  30.81 
 
 
232 aa  103  3e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  26.73 
 
 
238 aa  102  3e-21  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  31.36 
 
 
241 aa  102  4e-21  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  33.33 
 
 
238 aa  101  9e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  27.62 
 
 
223 aa  101  9e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  32.64 
 
 
223 aa  101  1e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  27.78 
 
 
227 aa  101  1e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  32.26 
 
 
229 aa  100  2e-20  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  31.61 
 
 
223 aa  99.8  3e-20  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  31.61 
 
 
223 aa  99.8  3e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  29.63 
 
 
236 aa  99.8  3e-20  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  29.63 
 
 
236 aa  99.8  3e-20  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  28.83 
 
 
267 aa  100  3e-20  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  29.3 
 
 
225 aa  100  3e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  31.61 
 
 
221 aa  99.8  4e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  27.83 
 
 
352 aa  99.4  5e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  30.23 
 
 
230 aa  98.6  7e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.67 
 
 
219 aa  98.6  7e-20  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  29.85 
 
 
222 aa  98.2  9e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  30.94 
 
 
240 aa  98.2  1e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  26.29 
 
 
237 aa  97.8  1e-19  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  27.06 
 
 
225 aa  96.7  2e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  32.12 
 
 
225 aa  97.1  2e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  32.12 
 
 
225 aa  97.1  2e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  31.28 
 
 
234 aa  96.7  2e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  30.32 
 
 
239 aa  96.3  3e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  28.85 
 
 
230 aa  95.9  4e-19  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  28.21 
 
 
228 aa  96.3  4e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  28.17 
 
 
220 aa  95.9  5e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  28.85 
 
 
230 aa  95.9  5e-19  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  27.59 
 
 
354 aa  95.5  5e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  28.85 
 
 
226 aa  95.9  5e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  28.37 
 
 
233 aa  95.9  5e-19  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  28.85 
 
 
230 aa  95.5  6e-19  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
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