6 homologs were found in PanDaTox collection
for query gene Hlac_R0034 on replicon NC_012029
Organism: Halorubrum lacusprofundi ATCC 49239



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012029  Hlac_R0034  tRNA-Pro  100 
 
 
73 bp  145  2e-33  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  decreased coverage  0.00151973 
 
 
-
 
NC_013158  Huta_R0015  tRNA-Pro  95.89 
 
 
73 bp  121  1.9999999999999998e-26  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_R0025  tRNA-Pro  95.89 
 
 
73 bp  121  1.9999999999999998e-26  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0907753  normal 
 
 
-
 
NC_013743  Htur_R0020  tRNA-Pro  100 
 
 
73 bp  97.6  3e-19  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_R0042  tRNA-Pro  97.96 
 
 
73 bp  89.7  8e-17  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013926  ABOO_t25  tRNA-Pro  91.18 
 
 
126 bp  44.1  0.004  Aciduliprofundum boonei T469  Archaea  normal  0.154394  n/a   
 
 
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