55 homologs were found in PanDaTox collection
for query gene Hhal_0045 on replicon NC_008789
Organism: Halorhodospira halophila SL1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008789  Hhal_0045  succinate dehydrogenase, cytochrome b subunit  100 
 
 
127 aa  252  1.0000000000000001e-66  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1333  succinate dehydrogenase subunit D  52.03 
 
 
126 aa  124  6e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.934114 
 
 
-
 
NC_002977  MCA1549  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  46.77 
 
 
126 aa  117  4.9999999999999996e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  0.591464  n/a   
 
 
-
 
NC_004310  BR1903  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  41.13 
 
 
131 aa  95.9  2e-19  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2108  succinate dehydrogenase, hydrophobic membrane anchor protein  39.2 
 
 
140 aa  94.7  4e-19  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1745  succinate dehydrogenase subunit D  44.26 
 
 
127 aa  94  6e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.287201  n/a   
 
 
-
 
NC_009505  BOV_1831  succinate dehydrogenase, hydrophobic membrane anchor protein  40.32 
 
 
131 aa  93.6  9e-19  Brucella ovis ATCC 25840  Bacteria  normal  0.405977  n/a   
 
 
-
 
NC_009720  Xaut_1966  succinate dehydrogenase hydrophobic membrane anchor  41.94 
 
 
135 aa  92.4  2e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.192092 
 
 
-
 
NC_009667  Oant_0952  succinate dehydrogenase hydrophobic membrane anchor  41.94 
 
 
131 aa  92  3e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.676521  n/a   
 
 
-
 
NC_011894  Mnod_7245  succinate dehydrogenase, hydrophobic membrane anchor protein  40.32 
 
 
137 aa  88.6  3e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.396127  n/a   
 
 
-
 
NC_010717  PXO_00603  succinate dehydrogenase, hydrophobic membrane anchor protein  46.83 
 
 
128 aa  87.8  4e-17  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3020  succinate dehydrogenase, cytochrome b subunit  42.98 
 
 
127 aa  87.8  4e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.915417 
 
 
-
 
NC_010577  XfasM23_0343  succinate dehydrogenase, hydrophobic membrane anchor protein  46.46 
 
 
127 aa  87.4  6e-17  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6039  succinate dehydrogenase, hydrophobic membrane anchor protein  40.32 
 
 
137 aa  87.4  6e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0685536 
 
 
-
 
NC_008254  Meso_3245  succinate dehydrogenase subunit D  38.58 
 
 
127 aa  87.4  6e-17  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0379  succinate dehydrogenase hydrophobic membrane anchor subunit  46.46 
 
 
127 aa  87  8e-17  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1536  succinate dehydrogenase, hydrophobic membrane anchor protein  42.86 
 
 
128 aa  86.3  1e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4277  succinate dehydrogenase, hydrophobic membrane anchor protein  40.65 
 
 
139 aa  84.7  4e-16  Methylobacterium populi BJ001  Bacteria  normal  0.692368  normal  0.965438 
 
 
-
 
NC_008048  Sala_3031  succinate dehydrogenase, cytochrome b subunit  41.67 
 
 
134 aa  82.8  0.000000000000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3601  succinate dehydrogenase, hydrophobic membrane anchor protein  39.84 
 
 
139 aa  82.4  0.000000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.0736554  normal 
 
 
-
 
NC_011757  Mchl_3893  succinate dehydrogenase, hydrophobic membrane anchor protein  39.84 
 
 
139 aa  82.4  0.000000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.20647  normal 
 
 
-
 
NC_009719  Plav_1434  succinate dehydrogenase hydrophobic membrane anchor  39.02 
 
 
141 aa  81.6  0.000000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1880  succinate dehydrogenase, cytochrome b subunit  45.6 
 
 
125 aa  82  0.000000000000003  Acidiphilium cryptum JF-5  Bacteria  normal  0.519683  n/a   
 
 
-
 
NC_009636  Smed_2958  succinate dehydrogenase hydrophobic membrane anchor  40 
 
 
126 aa  80.5  0.000000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.0363094  normal 
 
 
-
 
NC_007643  Rru_A1203  succinate dehydrogenase subunit D  39.53 
 
 
128 aa  79.7  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.767553  n/a   
 
 
-
 
NC_009511  Swit_1311  succinate dehydrogenase subunit D  36.89 
 
 
129 aa  79.7  0.00000000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.0693068  normal 
 
 
-
 
NC_011369  Rleg2_3691  succinate dehydrogenase, hydrophobic membrane anchor protein  37.8 
 
 
126 aa  77.8  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4839  succinate dehydrogenase, hydrophobic membrane anchor protein  39.68 
 
 
135 aa  77  0.00000000000008  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3979  succinate dehydrogenase, hydrophobic membrane anchor protein  37.4 
 
 
126 aa  75.9  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.705456  normal  0.476216 
 
 
-
 
NC_011989  Avi_4136  succinate dehydrogenase hydrophobic membrane anchor  38.3 
 
 
126 aa  75.1  0.0000000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0089  succinate dehydrogenase, hydrophobic membrane anchor protein  31.2 
 
 
128 aa  72  0.000000000002  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2750  succinate dehydrogenase, hydrophobic membrane anchor protein  32.79 
 
 
130 aa  67.4  0.00000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0458  succinate dehydrogenase, hydrophobic membrane anchor protein  44.68 
 
 
139 aa  67  0.00000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.152846  normal 
 
 
-
 
NC_007964  Nham_3617  succinate dehydrogenase, cytochrome b subunit  29.6 
 
 
133 aa  65.5  0.0000000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.0610127  n/a   
 
 
-
 
NC_007925  RPC_0071  succinate dehydrogenase, cytochrome b subunit  31.2 
 
 
140 aa  62.8  0.000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0326  succinate dehydrogenase, cytochrome b subunit  30.4 
 
 
140 aa  62.8  0.000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0217  succinate dehydrogenase, hydrophobic membrane anchor protein  31.15 
 
 
137 aa  62  0.000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.294581  n/a   
 
 
-
 
NC_009485  BBta_0229  succinate dehydrogenase subunit D  35.43 
 
 
124 aa  60.8  0.000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0481798  normal 
 
 
-
 
NC_009952  Dshi_2866  hypothetical protein  38.46 
 
 
123 aa  58.9  0.00000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2847  succinate dehydrogenase subunit D  35.45 
 
 
123 aa  58.5  0.00000003  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0917  putative succinate dehydrogenase, hydrophobic membrane anchor protein  36.14 
 
 
118 aa  58.2  0.00000004  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0480  succinate dehydrogenase, cytochrome b subunit  30.33 
 
 
140 aa  57.8  0.00000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.74591 
 
 
-
 
NC_007406  Nwi_2799  succinate dehydrogenase, cytochrome b subunit  27.2 
 
 
135 aa  57.4  0.00000006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_002978  WD1222  succinate dehydrogenase, hydrophobic membrane anchor protein, putative  27.78 
 
 
118 aa  56.2  0.0000001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0190  succinate dehydrogenase subunit D  29.57 
 
 
118 aa  55.1  0.0000003  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0810  succinate dehydrogenase subunit D  32.54 
 
 
123 aa  51.2  0.000004  Jannaschia sp. CCS1  Bacteria  normal  normal  0.851404 
 
 
-
 
NC_011666  Msil_3564  succinate dehydrogenase, hydrophobic membrane anchor protein  27.69 
 
 
129 aa  50.4  0.000009  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009379  Pnuc_0759  succinate dehydrogenase, cytochrome b subunit  29.52 
 
 
121 aa  45.1  0.0004  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0568  putative succinate dehydrogenase, hydrophobic membrane anchor protein  32.58 
 
 
129 aa  44.7  0.0004  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0825505 
 
 
-
 
NC_012853  Rleg_5819  succinate dehydrogenase, hydrophobic membrane anchor protein  33.68 
 
 
127 aa  44.7  0.0004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5889  succinate dehydrogenase, hydrophobic membrane anchor protein  33.68 
 
 
127 aa  43.1  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2635  putative succinate dehydrogenase, hydrophobic membrane anchor protein  32.61 
 
 
123 aa  42.4  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0975  succinate dehydrogenase subunit D  32.61 
 
 
123 aa  42.4  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2324  succinate dehydrogenase subunit D  32.47 
 
 
121 aa  42.4  0.002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0087  hypothetical protein  32.61 
 
 
123 aa  42  0.003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.5065  normal 
 
 
-
 
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