More than 300 homologs were found in PanDaTox collection
for query gene HS_1538 on replicon NC_008309
Organism: Haemophilus somnus 129PT



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008309  HS_1538  DNA-binding protein HU  100 
 
 
91 aa  177  2.9999999999999997e-44  Haemophilus somnus 129PT  Bacteria  unclonable  0.0000000000676058  n/a   
 
 
-
 
NC_011312  VSAL_I2846  DNA-binding protein HU-alpha  76.67 
 
 
90 aa  138  3e-32  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00368421  n/a   
 
 
-
 
NC_009783  VIBHAR_00213  DNA-binding protein  76.67 
 
 
101 aa  138  3e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002182  DNA-binding protein HU-alpha  75.56 
 
 
90 aa  136  8.999999999999999e-32  Vibrio sp. Ex25  Bacteria  normal  0.131368  n/a   
 
 
-
 
NC_012880  Dd703_3710  transcriptional regulator HU subunit alpha  76.4 
 
 
90 aa  135  2e-31  Dickeya dadantii Ech703  Bacteria  normal  0.273113  n/a   
 
 
-
 
CP001509  ECD_03877  HU, DNA-binding transcriptional regulator, alpha subunit  75.28 
 
 
90 aa  134  4e-31  Escherichia coli BL21(DE3)  Bacteria  normal  0.380115  n/a   
 
 
-
 
CP001637  EcDH1_3994  histone family protein DNA-binding protein  75.28 
 
 
90 aa  134  4e-31  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4448  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Escherichia coli SMS-3-5  Bacteria  normal  0.302586  hitchhiker  0.00101008 
 
 
-
 
NC_010468  EcolC_4025  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0158227 
 
 
-
 
NC_012892  B21_03830  hypothetical protein  75.28 
 
 
90 aa  134  4e-31  Escherichia coli BL21  Bacteria  normal  0.485291  n/a   
 
 
-
 
NC_011205  SeD_A4577  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.511964 
 
 
-
 
NC_009801  EcE24377A_4543  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Escherichia coli E24377A  Bacteria  normal  0.440082  n/a   
 
 
-
 
NC_012912  Dd1591_3864  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Dickeya zeae Ech1591  Bacteria  normal  0.78216  n/a   
 
 
-
 
NC_011083  SeHA_C4501  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.358882  normal  0.0495174 
 
 
-
 
NC_010658  SbBS512_E4491  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Shigella boydii CDC 3083-94  Bacteria  normal  0.0852675  n/a   
 
 
-
 
NC_011353  ECH74115_5469  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.129609  normal 
 
 
-
 
NC_009800  EcHS_A4234  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B4414  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.18011  n/a   
 
 
-
 
NC_011094  SeSA_A4381  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.842423 
 
 
-
 
NC_011080  SNSL254_A4503  transcriptional regulator HU subunit alpha  75.28 
 
 
90 aa  134  4e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0164141 
 
 
-
 
NC_013421  Pecwa_0226  transcriptional regulator HU subunit alpha  74.16 
 
 
90 aa  133  9.999999999999999e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0975648  n/a   
 
 
-
 
NC_012917  PC1_0222  transcriptional regulator HU subunit alpha  74.16 
 
 
90 aa  133  9.999999999999999e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.390191  n/a   
 
 
-
 
NC_009708  YpsIP31758_3846  transcriptional regulator HU subunit alpha  72.53 
 
 
91 aa  132  1.9999999999999998e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.219693  n/a   
 
 
-
 
NC_010159  YpAngola_A0462  transcriptional regulator HU subunit alpha  72.53 
 
 
91 aa  132  1.9999999999999998e-30  Yersinia pestis Angola  Bacteria  normal  0.082883  hitchhiker  0.00197429 
 
 
-
 
NC_010465  YPK_0354  transcriptional regulator HU subunit alpha  72.53 
 
 
91 aa  132  1.9999999999999998e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.224811  n/a   
 
 
-
 
NC_009436  Ent638_0213  transcriptional regulator HU subunit alpha  74.16 
 
 
90 aa  132  1.9999999999999998e-30  Enterobacter sp. 638  Bacteria  hitchhiker  0.00855152  normal  0.0112419 
 
 
-
 
NC_009457  VC0395_A2650  DNA-binding protein HU  74.16 
 
 
90 aa  131  3.9999999999999996e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0290  transcriptional regulator HU subunit alpha  73.03 
 
 
90 aa  131  3.9999999999999996e-30  Serratia proteamaculans 568  Bacteria  hitchhiker  0.0031706  hitchhiker  0.00995537 
 
 
-
 
NC_008709  Ping_3218  DNA-binding protein HU alpha subunit  71.11 
 
 
91 aa  128  3e-29  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.585838 
 
 
-
 
NC_007984  BCI_0040  DNA-binding protein HU-alpha  61.54 
 
 
94 aa  120  7e-27  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  67.42 
 
 
90 aa  119  9.999999999999999e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  65.17 
 
 
90 aa  119  9.999999999999999e-27  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  67.42 
 
 
90 aa  119  9.999999999999999e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  67.42 
 
 
90 aa  119  9.999999999999999e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_009656  PSPA7_3493  DNA-binding protein HU  63.33 
 
 
90 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.175993  n/a   
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  62.92 
 
 
90 aa  119  1.9999999999999998e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_008463  PA14_41210  DNA-binding protein HU  63.33 
 
 
90 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0758892  normal  0.416187 
 
 
-
 
NC_009439  Pmen_2053  nucleoid protein HU beta subunit  63.33 
 
 
90 aa  119  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000457213  normal  0.0670315 
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  65.56 
 
 
90 aa  118  3e-26  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  66.29 
 
 
90 aa  117  4.9999999999999996e-26  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_011901  Tgr7_0942  histone family protein DNA-binding protein  62.22 
 
 
90 aa  117  6e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  62.92 
 
 
90 aa  117  7e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  63.64 
 
 
91 aa  116  9.999999999999999e-26  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_012560  Avin_23600  histone-like DNA-binding protein  62.22 
 
 
90 aa  116  9.999999999999999e-26  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  65.17 
 
 
90 aa  116  9.999999999999999e-26  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011311  VSAL_p840_28  DNA-binding protein HU-alpha  64.44 
 
 
91 aa  115  1.9999999999999998e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  63.33 
 
 
90 aa  115  1.9999999999999998e-25  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  60.67 
 
 
90 aa  114  5e-25  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  60.67 
 
 
90 aa  114  5e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  60.67 
 
 
90 aa  114  6e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  61.11 
 
 
90 aa  113  6.9999999999999995e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  59.55 
 
 
90 aa  113  7.999999999999999e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_007614  Nmul_A2337  histone-like DNA-binding protein  61.11 
 
 
90 aa  113  8.999999999999998e-25  Nitrosospira multiformis ATCC 25196  Bacteria  unclonable  0.0000000498066  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  61.8 
 
 
90 aa  113  8.999999999999998e-25  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_013456  VEA_004041  DNA-binding protein HU-beta  61.11 
 
 
90 aa  112  1.0000000000000001e-24  Vibrio sp. Ex25  Bacteria  unclonable  0.000000015142  n/a   
 
 
-
 
CP001509  ECD_00392  HU, DNA-binding transcriptional regulator, beta subunit  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3169  histone family protein DNA-binding protein  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli DH1  Bacteria  hitchhiker  0.000005828  n/a   
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  64.04 
 
 
90 aa  112  2.0000000000000002e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_009801  EcE24377A_0476  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli E24377A  Bacteria  hitchhiker  0.000220916  n/a   
 
 
-
 
NC_010501  PputW619_1745  histone family protein DNA-binding protein  60 
 
 
90 aa  112  2.0000000000000002e-24  Pseudomonas putida W619  Bacteria  normal  0.693876  hitchhiker  0.00044049 
 
 
-
 
NC_012892  B21_00396  hypothetical protein  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3192  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli ATCC 8739  Bacteria  normal  0.0216859  hitchhiker  0.00242013 
 
 
-
 
NC_010498  EcSMS35_0483  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000219434  normal 
 
 
-
 
NC_009800  EcHS_A0517  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli HS  Bacteria  hitchhiker  0.0000000000441181  n/a   
 
 
-
 
NC_011353  ECH74115_0526  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00026983  normal  0.698185 
 
 
-
 
NC_009832  Spro_1098  histone family protein DNA-binding protein  61.11 
 
 
101 aa  112  2.0000000000000002e-24  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00970005  hitchhiker  0.00000236625 
 
 
-
 
NC_010658  SbBS512_E0363  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  112  2.0000000000000002e-24  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00017145  n/a   
 
 
-
 
NC_004578  PSPTO_3723  DNA-binding protein HU-beta  58.89 
 
 
90 aa  111  3e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.612497  n/a   
 
 
-
 
NC_007005  Psyr_1750  histone-like DNA-binding protein  58.89 
 
 
90 aa  111  3e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.519537  normal  0.0235988 
 
 
-
 
NC_007492  Pfl01_3694  nucleoid protein HU beta subunit  58.89 
 
 
90 aa  111  3e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.566059  normal 
 
 
-
 
NC_010717  PXO_02474  DNA-binding protein HU  61.11 
 
 
90 aa  112  3e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  62.22 
 
 
90 aa  111  3e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  59.55 
 
 
90 aa  111  3e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  57.78 
 
 
90 aa  111  3e-24  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal 
 
 
-
 
NC_002947  PP_2303  histone family protein DNA-binding protein  60 
 
 
90 aa  111  4.0000000000000004e-24  Pseudomonas putida KT2440  Bacteria  normal  0.0561689  hitchhiker  0.000233767 
 
 
-
 
NC_009512  Pput_3466  histone family protein DNA-binding protein  60 
 
 
90 aa  111  4.0000000000000004e-24  Pseudomonas putida F1  Bacteria  normal  0.360259  hitchhiker  0.000212777 
 
 
-
 
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