7 homologs were found in PanDaTox collection
for query gene HMPREF0424_0945 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_0945  hypothetical protein  100 
 
 
146 aa  295  2e-79  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_1855  hypothetical protein  60 
 
 
144 aa  161  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1414  hypothetical protein  46.67 
 
 
158 aa  127  6e-29  Eggerthella lenta DSM 2243  Bacteria  normal  0.0874091  normal 
 
 
-
 
NC_007355  Mbar_A2110  hypothetical protein  42.19 
 
 
145 aa  88.2  4e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.538327  normal 
 
 
-
 
NC_013165  Shel_22970  hypothetical protein  37.04 
 
 
140 aa  83.6  9e-16  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.0000147285  normal 
 
 
-
 
NC_008261  CPF_1105  hypothetical protein  39.84 
 
 
154 aa  73.2  0.000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0961  hypothetical protein  39.84 
 
 
154 aa  72.8  0.000000000002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00000219081  n/a   
 
 
-
 
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