More than 300 homologs were found in PanDaTox collection
for query gene Gura_3744 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_3744  putative GAF sensor protein  100 
 
 
323 aa  656    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1316  response regulator  58.28 
 
 
324 aa  385  1e-106  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3555  response regulator receiver modulated GAF sensor protein  48.25 
 
 
325 aa  294  1e-78  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00506261  n/a   
 
 
-
 
NC_009767  Rcas_2148  multi-sensor hybrid histidine kinase  26.11 
 
 
819 aa  116  3.9999999999999997e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.233006  hitchhiker  0.00949178 
 
 
-
 
NC_013440  Hoch_4444  response regulator receiver modulated metal dependent phosphohydrolase  29.5 
 
 
526 aa  114  2.0000000000000002e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2355  two component Fis family transcriptional regulator  33.78 
 
 
465 aa  113  4.0000000000000004e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.658958  n/a   
 
 
-
 
NC_011146  Gbem_2715  response regulator receiver modulated diguanylate cyclase  39.86 
 
 
314 aa  111  1.0000000000000001e-23  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1525  response regulator receiver modulated diguanylate cyclase  39.19 
 
 
316 aa  110  3e-23  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.15223e-23 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  42.65 
 
 
454 aa  110  4.0000000000000004e-23  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3026  signal transduction histidine kinase, nitrogen specific, NtrB  26.11 
 
 
819 aa  109  5e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.956622  normal 
 
 
-
 
NC_007517  Gmet_1914  response regulator receiver modulated diguanylate cyclase  28.8 
 
 
459 aa  108  1e-22  Geobacter metallireducens GS-15  Bacteria  normal  0.943888  hitchhiker  0.00021307 
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  33.76 
 
 
412 aa  108  2e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_011831  Cagg_2013  multi-sensor hybrid histidine kinase  24.92 
 
 
801 aa  107  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  33.33 
 
 
412 aa  107  2e-22  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  33.33 
 
 
393 aa  107  2e-22  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_009483  Gura_1886  diguanylate cyclase  31.84 
 
 
462 aa  107  3e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  40.3 
 
 
455 aa  106  4e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  33.73 
 
 
457 aa  107  4e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4259  multi-sensor hybrid histidine kinase  27.18 
 
 
804 aa  106  6e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2165  response regulator  32.68 
 
 
393 aa  106  7e-22  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  32.68 
 
 
393 aa  105  8e-22  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  39.55 
 
 
458 aa  105  9e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  37.76 
 
 
490 aa  105  1e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  27.9 
 
 
513 aa  105  1e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  39.55 
 
 
457 aa  105  1e-21  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1360  two component, sigma54 specific, transcriptional regulator, Fis family  40.91 
 
 
525 aa  105  1e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  27.97 
 
 
458 aa  105  2e-21  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  35.37 
 
 
454 aa  103  4e-21  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_009656  PSPA7_2359  putative two-component response regulator  31.85 
 
 
394 aa  103  5e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  33.71 
 
 
452 aa  103  6e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2161  adenylate/guanylate cyclase with GAF sensor(s)  29.07 
 
 
1020 aa  102  6e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0428251  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  39.34 
 
 
465 aa  102  7e-21  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_008751  Dvul_1117  two component, sigma54 specific, Fis family transcriptional regulator  28.7 
 
 
462 aa  102  7e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.144471  normal  0.173796 
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  31.63 
 
 
460 aa  102  1e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  36.69 
 
 
458 aa  101  1e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  37.06 
 
 
471 aa  101  1e-20  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  40.54 
 
 
459 aa  101  1e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2675  multi-sensor signal transduction histidine kinase  25.31 
 
 
666 aa  101  1e-20  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.518725  hitchhiker  0.00000576965 
 
 
-
 
NC_011769  DvMF_2748  two component, sigma54 specific, transcriptional regulator, Fis family  27.64 
 
 
542 aa  101  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  34.36 
 
 
464 aa  102  1e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2591  two component, sigma54 specific, transcriptional regulator, Fis family  29.13 
 
 
457 aa  100  2e-20  Geobacter bemidjiensis Bem  Bacteria  normal  0.313706  n/a   
 
 
-
 
NC_012918  GM21_1635  two component, sigma54 specific, transcriptional regulator, Fis family  33.14 
 
 
457 aa  101  2e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_27940  putative two-component response regulator  31.21 
 
 
394 aa  101  2e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0614  putative GAF sensor protein  26.2 
 
 
622 aa  101  2e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.00376401  normal 
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  40.58 
 
 
451 aa  100  3e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0732  two component, sigma54 specific, Fis family transcriptional regulator  36.5 
 
 
471 aa  100  3e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.121473  normal 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  32.56 
 
 
448 aa  100  3e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1912  response regulator receiver:stage II sporulation E  33.33 
 
 
394 aa  100  4e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.432168  hitchhiker  0.00180426 
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  44.66 
 
 
480 aa  100  4e-20  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_007517  Gmet_1919  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  38.41 
 
 
350 aa  100  5e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.179225 
 
 
-
 
NC_009972  Haur_3459  multi-sensor signal transduction histidine kinase  23.32 
 
 
544 aa  99.8  5e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2117  response regulator  33.33 
 
 
394 aa  99.8  6e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0129975  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  34.36 
 
 
463 aa  99.8  6e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  28.89 
 
 
476 aa  99.8  6e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  34.36 
 
 
464 aa  99.4  7e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  32.37 
 
 
455 aa  99.4  7e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_008609  Ppro_1380  response regulator receiver modulated diguanylate cyclase  37.58 
 
 
454 aa  99.4  7e-20  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00781234  n/a   
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  27.27 
 
 
477 aa  99  9e-20  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  37.41 
 
 
391 aa  98.6  1e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1042  two component signal transduction response regulator  33.33 
 
 
465 aa  99  1e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.472622  n/a   
 
 
-
 
NC_009439  Pmen_1929  response regulator receiver protein  31.21 
 
 
394 aa  98.6  1e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.310245 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  34.71 
 
 
458 aa  98.6  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  26.81 
 
 
466 aa  99  1e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  34.71 
 
 
458 aa  99  1e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  36.62 
 
 
470 aa  97.8  2e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
480 aa  97.8  2e-19  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009767  Rcas_3177  adenylate/guanylate cyclase with GAF and PAS/PAC sensors  27.07 
 
 
971 aa  98.2  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0187  two component, sigma54 specific, transcriptional regulator, Fis family  36.48 
 
 
457 aa  97.8  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  36.62 
 
 
470 aa  97.1  3e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_013440  Hoch_3222  two component, sigma54 specific, transcriptional regulator, Fis family  31.09 
 
 
447 aa  97.4  3e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0905113 
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  37.32 
 
 
391 aa  97.4  3e-19  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  27.56 
 
 
456 aa  96.7  4e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2694  putative PAS/PAC sensor protein  25.47 
 
 
969 aa  96.7  5e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.0176534  normal 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  34.29 
 
 
453 aa  96.7  5e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_010814  Glov_0143  two component, sigma54 specific, transcriptional regulator, Fis family  37.96 
 
 
449 aa  96.7  5e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2395  response regulator receiver modulated metal dependent phosphohydrolase  28 
 
 
491 aa  96.3  6e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.357639  normal  0.166027 
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  41.75 
 
 
481 aa  96.3  7e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  36.94 
 
 
457 aa  95.9  8e-19  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  37.69 
 
 
461 aa  95.9  8e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
941 aa  95.9  8e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  34.05 
 
 
453 aa  95.9  9e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3097  diguanylate cyclase  26.98 
 
 
458 aa  95.5  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.948135  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.34 
 
 
457 aa  95.5  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  37.14 
 
 
653 aa  95.1  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1356  response regulator receiver  32.18 
 
 
386 aa  95.1  1e-18  Shewanella denitrificans OS217  Bacteria  normal  0.235342  n/a   
 
 
-
 
NC_011060  Ppha_1319  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
452 aa  95.5  1e-18  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  41.75 
 
 
480 aa  95.5  1e-18  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
NC_007760  Adeh_0571  putative GAF sensor protein  24.85 
 
 
622 aa  94.4  2e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  41.12 
 
 
480 aa  94.7  2e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  40.71 
 
 
462 aa  94.4  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  37.04 
 
 
457 aa  95.1  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  30.82 
 
 
147 aa  94  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  35.71 
 
 
451 aa  94.4  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  37.68 
 
 
461 aa  94  3e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_002936  DET0624  response regulator  31.94 
 
 
334 aa  93.6  4e-18  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  38.93 
 
 
388 aa  93.6  4e-18  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0344  two component Fis family transcriptional regulator  35.97 
 
 
452 aa  93.6  4e-18  Chlorobium luteolum DSM 273  Bacteria  normal  0.0882822  normal  0.355114 
 
 
-
 
NC_011145  AnaeK_0606  response regulator receiver modulated GAF sensor protein  24.62 
 
 
622 aa  93.6  4e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1165  diguanylate cyclase  25.55 
 
 
459 aa  93.6  4e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000192138 
 
 
-
 
NC_011891  A2cp1_0598  response regulator receiver modulated GAF sensor protein  24.62 
 
 
622 aa  93.6  4e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.592678  n/a   
 
 
-
 
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