More than 300 homologs were found in PanDaTox collection
for query gene Gobs_4335 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  100 
 
 
521 aa  1037    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  40.71 
 
 
522 aa  315  1.9999999999999998e-84  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  41.11 
 
 
732 aa  286  7e-76  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  38 
 
 
517 aa  267  4e-70  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  38.18 
 
 
567 aa  252  1e-65  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  34.66 
 
 
505 aa  240  5e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  36.56 
 
 
676 aa  238  1e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  35.43 
 
 
490 aa  237  3e-61  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  35.43 
 
 
490 aa  237  5.0000000000000005e-61  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  35.43 
 
 
490 aa  237  5.0000000000000005e-61  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  34.57 
 
 
493 aa  232  1e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  34.16 
 
 
497 aa  229  8e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  35.97 
 
 
496 aa  229  1e-58  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  36.3 
 
 
538 aa  228  1e-58  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  33.33 
 
 
497 aa  228  2e-58  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  33.98 
 
 
493 aa  224  3e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  41.48 
 
 
410 aa  222  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  32.8 
 
 
504 aa  216  5.9999999999999996e-55  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  33.19 
 
 
509 aa  216  8e-55  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  36.42 
 
 
625 aa  213  7.999999999999999e-54  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  37.99 
 
 
545 aa  211  3e-53  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  36.09 
 
 
573 aa  209  1e-52  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  31.26 
 
 
547 aa  205  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  36.48 
 
 
512 aa  202  9.999999999999999e-51  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.3 
 
 
549 aa  200  6e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  35.53 
 
 
516 aa  197  4.0000000000000005e-49  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  36.17 
 
 
491 aa  197  5.000000000000001e-49  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  34.26 
 
 
520 aa  195  1e-48  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  34.44 
 
 
468 aa  194  4e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  41.73 
 
 
382 aa  185  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  38.56 
 
 
514 aa  184  4.0000000000000006e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  37.36 
 
 
414 aa  182  1e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  32.43 
 
 
520 aa  182  1e-44  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  32.18 
 
 
734 aa  178  2e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  37.39 
 
 
512 aa  174  2.9999999999999996e-42  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  30.04 
 
 
478 aa  172  9e-42  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  36.36 
 
 
326 aa  172  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  37 
 
 
390 aa  171  2e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  29.08 
 
 
530 aa  167  4e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  34.93 
 
 
486 aa  166  9e-40  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  37.98 
 
 
307 aa  166  9e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  34.07 
 
 
362 aa  166  1.0000000000000001e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  31.27 
 
 
649 aa  165  2.0000000000000002e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  31.72 
 
 
481 aa  164  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  38.06 
 
 
311 aa  163  6e-39  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  38.06 
 
 
311 aa  163  6e-39  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  30.73 
 
 
468 aa  161  2e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  37.72 
 
 
311 aa  162  2e-38  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  38.46 
 
 
409 aa  162  2e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  30.7 
 
 
699 aa  160  5e-38  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  30.7 
 
 
699 aa  160  5e-38  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  29.88 
 
 
618 aa  160  6e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  30.76 
 
 
701 aa  160  6e-38  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  34.67 
 
 
307 aa  159  8e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  31.83 
 
 
687 aa  159  8e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  34.77 
 
 
664 aa  159  1e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  35.74 
 
 
336 aa  159  1e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  34.51 
 
 
320 aa  156  8e-37  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  30.13 
 
 
684 aa  154  2.9999999999999998e-36  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  31.3 
 
 
1336 aa  153  8e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  31.98 
 
 
506 aa  152  2e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  37.29 
 
 
306 aa  150  4e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  31.69 
 
 
526 aa  150  5e-35  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  37.5 
 
 
407 aa  150  7e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  32.19 
 
 
404 aa  149  1.0000000000000001e-34  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  29.29 
 
 
480 aa  149  1.0000000000000001e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.72 
 
 
349 aa  147  4.0000000000000006e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  35.35 
 
 
619 aa  147  5e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  33.11 
 
 
393 aa  146  7.0000000000000006e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  35.94 
 
 
424 aa  145  1e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  31.3 
 
 
560 aa  145  2e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  37.07 
 
 
394 aa  145  2e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  35.13 
 
 
434 aa  145  2e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  34.07 
 
 
463 aa  143  7e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  31.15 
 
 
414 aa  142  9.999999999999999e-33  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  34.05 
 
 
466 aa  142  1.9999999999999998e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  31.94 
 
 
420 aa  142  1.9999999999999998e-32  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  30.24 
 
 
551 aa  140  6e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  37.17 
 
 
303 aa  137  4e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  37.41 
 
 
363 aa  136  8e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  29.94 
 
 
481 aa  136  9e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  28.88 
 
 
381 aa  136  9e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  29.96 
 
 
540 aa  136  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  26.72 
 
 
405 aa  134  3.9999999999999996e-30  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  31.08 
 
 
643 aa  134  5e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  27.37 
 
 
382 aa  133  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  32.09 
 
 
434 aa  132  1.0000000000000001e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  33.44 
 
 
296 aa  132  2.0000000000000002e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  33.73 
 
 
379 aa  132  2.0000000000000002e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  33.97 
 
 
340 aa  131  3e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  34.52 
 
 
374 aa  128  2.0000000000000002e-28  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  30.65 
 
 
377 aa  127  5e-28  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  30.04 
 
 
391 aa  126  9e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  31.35 
 
 
495 aa  125  2e-27  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  35.2 
 
 
379 aa  124  3e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  34.88 
 
 
389 aa  124  3e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  31.45 
 
 
442 aa  123  9e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  28.78 
 
 
584 aa  123  9e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31.18 
 
 
400 aa  123  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  27.04 
 
 
563 aa  123  9.999999999999999e-27  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
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