More than 300 homologs were found in PanDaTox collection
for query gene Gobs_3157 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  100 
 
 
222 aa  426  1e-118  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  54.68 
 
 
163 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  55.63 
 
 
175 aa  140  9.999999999999999e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  50.67 
 
 
151 aa  135  4e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  51.05 
 
 
161 aa  134  9.999999999999999e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  55.78 
 
 
171 aa  133  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  51.63 
 
 
175 aa  132  3e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  54.11 
 
 
153 aa  131  9e-30  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  53.96 
 
 
143 aa  130  2.0000000000000002e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  54.11 
 
 
153 aa  130  2.0000000000000002e-29  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  57.78 
 
 
154 aa  129  5.0000000000000004e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  53.24 
 
 
169 aa  128  7.000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  53.24 
 
 
169 aa  128  7.000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.345644 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  53.24 
 
 
169 aa  128  8.000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  58.27 
 
 
163 aa  128  9.000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal 
 
 
-
 
NC_014151  Cfla_1819  Holliday junction resolvase YqgF  55.94 
 
 
190 aa  127  1.0000000000000001e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0503115  normal 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  52.59 
 
 
163 aa  125  6e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  53.85 
 
 
184 aa  122  3e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  50 
 
 
188 aa  122  5e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_013510  Tcur_2136  Holliday junction resolvase YqgF  58.27 
 
 
152 aa  122  6e-27  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000271405  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  51.37 
 
 
161 aa  121  8e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  54.81 
 
 
170 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  50.71 
 
 
173 aa  119  4.9999999999999996e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  48.57 
 
 
202 aa  118  6e-26  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  49.31 
 
 
156 aa  117  9.999999999999999e-26  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  56.3 
 
 
170 aa  117  1.9999999999999998e-25  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  53.68 
 
 
161 aa  117  1.9999999999999998e-25  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  48.61 
 
 
199 aa  111  8.000000000000001e-24  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  46.62 
 
 
140 aa  111  9e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  51.7 
 
 
167 aa  109  3e-23  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  43.04 
 
 
181 aa  108  5e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  46.9 
 
 
207 aa  107  2e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  40.29 
 
 
139 aa  104  1e-21  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  45.93 
 
 
137 aa  104  1e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  43.38 
 
 
141 aa  104  1e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  40.15 
 
 
141 aa  101  7e-21  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  45.11 
 
 
137 aa  101  8e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_007333  Tfu_2069  Holliday junction resolvase-like protein  54.79 
 
 
159 aa  101  1e-20  Thermobifida fusca YX  Bacteria  normal  0.0705886  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  45.11 
 
 
137 aa  100  1e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  38.69 
 
 
149 aa  101  1e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  37.31 
 
 
153 aa  100  2e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  38.06 
 
 
137 aa  100  2e-20  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  50.34 
 
 
169 aa  99.8  3e-20  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_013174  Jden_1350  Holliday junction resolvase YqgF  43.71 
 
 
167 aa  100  3e-20  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  44.36 
 
 
137 aa  98.2  9e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  38.57 
 
 
146 aa  97.4  1e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  43.36 
 
 
143 aa  97.4  1e-19  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  39.13 
 
 
138 aa  97.1  2e-19  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  41.43 
 
 
146 aa  96.7  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  38.24 
 
 
158 aa  96.3  3e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  39.42 
 
 
137 aa  95.1  7e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  39.42 
 
 
140 aa  95.1  8e-19  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  39.26 
 
 
160 aa  95.1  8e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  41.18 
 
 
143 aa  94.7  8e-19  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  36.57 
 
 
139 aa  94.4  1e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  94.4  1e-18  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  94.4  1e-18  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  94.4  1e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  94.4  1e-18  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  36.57 
 
 
139 aa  94.4  1e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  94.4  1e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  40.58 
 
 
138 aa  94.4  1e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  94.4  1e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  38.97 
 
 
150 aa  93.6  2e-18  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  39.26 
 
 
137 aa  93.6  2e-18  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  40.77 
 
 
144 aa  94  2e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_007802  Jann_2181  Holliday junction resolvase YqgF  41.91 
 
 
145 aa  93.2  2e-18  Jannaschia sp. CCS1  Bacteria  normal  0.659798  normal 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  38.35 
 
 
141 aa  94  2e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  36.36 
 
 
142 aa  92.8  4e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  39.42 
 
 
141 aa  92.4  5e-18  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  36.57 
 
 
157 aa  92.4  5e-18  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  43.07 
 
 
139 aa  92  6e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  37.96 
 
 
137 aa  92  6e-18  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  42.03 
 
 
168 aa  92  7e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  39.26 
 
 
137 aa  91.7  7e-18  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  39.6 
 
 
152 aa  91.7  8e-18  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  37.78 
 
 
139 aa  91.7  9e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  41.67 
 
 
149 aa  90.9  1e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  37.96 
 
 
137 aa  91.3  1e-17  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  35.82 
 
 
142 aa  90.9  2e-17  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  36.57 
 
 
151 aa  90.5  2e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  37.68 
 
 
143 aa  90.5  2e-17  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  34.29 
 
 
182 aa  89.7  3e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  35.82 
 
 
150 aa  89.7  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  36.73 
 
 
152 aa  89.7  3e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  40.46 
 
 
163 aa  90.1  3e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  39.55 
 
 
136 aa  89.4  4e-17  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  37.78 
 
 
160 aa  89.4  5e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0446184 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  38.06 
 
 
151 aa  89  6e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  34.78 
 
 
142 aa  88.6  7e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  34.78 
 
 
142 aa  88.6  7e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  37.68 
 
 
144 aa  88.6  7e-17  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  33.33 
 
 
142 aa  88.2  9e-17  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  38.52 
 
 
161 aa  88.2  9e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  35.29 
 
 
147 aa  87.4  1e-16  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  31.65 
 
 
141 aa  87.4  1e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  38.97 
 
 
139 aa  87.8  1e-16  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  36.76 
 
 
137 aa  87  2e-16  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  42.22 
 
 
142 aa  87.4  2e-16  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  35.04 
 
 
139 aa  87  2e-16  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
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