More than 300 homologs were found in PanDaTox collection
for query gene Gobs_2479 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  100 
 
 
258 aa  501  1e-141  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  54.9 
 
 
257 aa  270  2e-71  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
NC_013947  Snas_2332  binding-protein-dependent transport systems inner membrane component  56.85 
 
 
276 aa  220  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0286  binding-protein-dependent transport systems inner membrane component  49.22 
 
 
261 aa  204  8e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000248355 
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  41.6 
 
 
263 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  42.23 
 
 
257 aa  186  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  40.32 
 
 
273 aa  185  8e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  43.1 
 
 
269 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5729  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
263 aa  184  2.0000000000000003e-45  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5350  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
263 aa  184  2.0000000000000003e-45  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5439  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
263 aa  184  2.0000000000000003e-45  Mycobacterium sp. KMS  Bacteria  normal  normal  0.56019 
 
 
-
 
NC_013510  Tcur_4671  binding-protein-dependent transport systems inner membrane component  43.65 
 
 
274 aa  160  1e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  39.71 
 
 
272 aa  155  6e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
298 aa  150  2e-35  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
287 aa  148  9e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
278 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  35 
 
 
272 aa  140  1.9999999999999998e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  34.33 
 
 
255 aa  138  8.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  35.81 
 
 
281 aa  137  2e-31  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
281 aa  137  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
255 aa  135  6.0000000000000005e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
273 aa  134  9.999999999999999e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
273 aa  134  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
273 aa  134  9.999999999999999e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
273 aa  134  1.9999999999999998e-30  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
280 aa  132  6e-30  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
263 aa  130  3e-29  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  35.29 
 
 
283 aa  130  3e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  37.17 
 
 
277 aa  129  4.0000000000000003e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
280 aa  129  4.0000000000000003e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0040  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
259 aa  129  5.0000000000000004e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.832577  normal  0.34867 
 
 
-
 
NC_008254  Meso_3539  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
253 aa  129  6e-29  Chelativorans sp. BNC1  Bacteria  normal  0.158821  n/a   
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  30.83 
 
 
271 aa  128  8.000000000000001e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_008825  Mpe_A0116  membrane protein  39.05 
 
 
281 aa  128  8.000000000000001e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.0935043  hitchhiker  0.000854026 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
273 aa  128  1.0000000000000001e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
273 aa  127  2.0000000000000002e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  32.31 
 
 
290 aa  127  3e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
280 aa  126  4.0000000000000003e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  43.52 
 
 
259 aa  126  4.0000000000000003e-28  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
279 aa  126  4.0000000000000003e-28  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
280 aa  125  5e-28  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_008786  Veis_0386  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
266 aa  125  7e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.314921 
 
 
-
 
NC_008786  Veis_3788  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
276 aa  125  9e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.374556  normal 
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  35.05 
 
 
272 aa  124  1e-27  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  35.05 
 
 
272 aa  124  1e-27  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4541  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
283 aa  124  1e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.193679 
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  37.5 
 
 
274 aa  124  1e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  37.04 
 
 
274 aa  123  3e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_012917  PC1_3747  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
254 aa  123  3e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
274 aa  123  4e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4330  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
276 aa  122  6e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.936191 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
291 aa  122  7e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
291 aa  122  7e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_012854  Rleg_6387  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
283 aa  122  8e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.199649  normal  0.0607956 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  32.63 
 
 
286 aa  122  8e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
277 aa  122  8e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_007947  Mfla_2559  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
283 aa  121  9e-27  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
305 aa  120  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1186  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
257 aa  121  9.999999999999999e-27  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.409709  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
265 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  33.05 
 
 
279 aa  120  1.9999999999999998e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_007973  Rmet_1372  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
268 aa  120  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  29.84 
 
 
280 aa  120  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  37.5 
 
 
269 aa  119  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
254 aa  119  3.9999999999999996e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
254 aa  118  7e-26  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  29.23 
 
 
280 aa  119  7e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_008726  Mvan_3413  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
271 aa  118  7.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0409101  normal  0.884011 
 
 
-
 
CP001509  ECD_00317  taurine transporter subunit  32.41 
 
 
275 aa  117  9.999999999999999e-26  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
279 aa  118  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_012892  B21_00321  hypothetical protein  32.41 
 
 
275 aa  117  9.999999999999999e-26  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  30 
 
 
275 aa  118  9.999999999999999e-26  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2657  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
269 aa  118  9.999999999999999e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.363458 
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  37.37 
 
 
253 aa  118  9.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  37.37 
 
 
283 aa  118  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  37.37 
 
 
283 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_013385  Adeg_0352  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
245 aa  118  9.999999999999999e-26  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  37.37 
 
 
253 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  37.37 
 
 
285 aa  118  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_009800  EcHS_A0431  taurine transporter subunit  33.33 
 
 
275 aa  117  9.999999999999999e-26  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
288 aa  118  9.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
289 aa  117  9.999999999999999e-26  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3261  taurine transporter subunit  32.41 
 
 
275 aa  117  9.999999999999999e-26  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  37.37 
 
 
283 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
CP001637  EcDH1_3240  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
275 aa  117  1.9999999999999998e-25  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0391  taurine transporter subunit  33.33 
 
 
275 aa  117  1.9999999999999998e-25  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4332  ABC transporter permease  34.7 
 
 
298 aa  117  1.9999999999999998e-25  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3034  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
269 aa  117  1.9999999999999998e-25  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
264 aa  117  1.9999999999999998e-25  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
255 aa  117  1.9999999999999998e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
272 aa  116  3e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  31.11 
 
 
282 aa  115  6e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_008786  Veis_0834  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
264 aa  115  6e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
273 aa  115  6.9999999999999995e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  31.53 
 
 
273 aa  115  6.9999999999999995e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  32.8 
 
 
262 aa  115  6.9999999999999995e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0442  taurine transporter subunit  32.55 
 
 
275 aa  115  6.9999999999999995e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0423  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
297 aa  115  6.9999999999999995e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.283538  n/a   
 
 
-
 
NC_013441  Gbro_3478  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
291 aa  115  6.9999999999999995e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  0.466071  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
315 aa  115  7.999999999999999e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
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