More than 300 homologs were found in PanDaTox collection
for query gene Gmet_1078 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  100 
 
 
587 aa  1184    Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  70.4 
 
 
585 aa  802    Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.2 
 
 
584 aa  691    Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  65.2 
 
 
584 aa  691    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.03 
 
 
566 aa  504  1e-141  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  54.17 
 
 
541 aa  503  1e-141  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  49.81 
 
 
585 aa  466  9.999999999999999e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.46 
 
 
513 aa  456  1e-127  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  51.5 
 
 
519 aa  457  1e-127  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  55.46 
 
 
513 aa  456  1e-127  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
621 aa  452  1.0000000000000001e-126  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  49.61 
 
 
520 aa  452  1e-125  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  47.25 
 
 
519 aa  450  1e-125  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  53.24 
 
 
513 aa  447  1.0000000000000001e-124  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.03 
 
 
618 aa  447  1.0000000000000001e-124  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  43.34 
 
 
627 aa  442  9.999999999999999e-123  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  52.83 
 
 
629 aa  436  1e-121  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  50.48 
 
 
515 aa  438  1e-121  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.58 
 
 
515 aa  435  1e-121  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  48.07 
 
 
515 aa  435  1e-120  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.31 
 
 
564 aa  434  1e-120  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
517 aa  434  1e-120  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  47.29 
 
 
611 aa  433  1e-120  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
517 aa  431  1e-119  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  46.64 
 
 
598 aa  431  1e-119  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
541 aa  432  1e-119  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
517 aa  430  1e-119  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
541 aa  432  1e-119  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
519 aa  431  1e-119  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  50 
 
 
513 aa  426  1e-118  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
518 aa  426  1e-118  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  51.14 
 
 
517 aa  425  1e-117  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  47.74 
 
 
546 aa  422  1e-117  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  53.78 
 
 
464 aa  423  1e-117  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  50.94 
 
 
517 aa  422  1e-117  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  53.78 
 
 
517 aa  422  1e-117  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  49.58 
 
 
512 aa  424  1e-117  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  53.78 
 
 
517 aa  422  1e-117  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  47.54 
 
 
546 aa  421  1e-116  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  49.69 
 
 
511 aa  421  1e-116  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  49.69 
 
 
526 aa  421  1e-116  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  50.52 
 
 
482 aa  420  1e-116  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  47.54 
 
 
546 aa  421  1e-116  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  47.54 
 
 
546 aa  421  1e-116  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  50.62 
 
 
520 aa  421  1e-116  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  47.54 
 
 
546 aa  421  1e-116  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  47.56 
 
 
518 aa  417  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  47.08 
 
 
544 aa  418  9.999999999999999e-116  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  50 
 
 
513 aa  418  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  49.58 
 
 
513 aa  416  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  47.55 
 
 
515 aa  416  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
521 aa  412  1e-114  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  49.8 
 
 
542 aa  414  1e-114  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
521 aa  409  1e-113  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.12 
 
 
579 aa  406  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
545 aa  406  1.0000000000000001e-112  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
545 aa  406  1.0000000000000001e-112  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
545 aa  408  1.0000000000000001e-112  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
598 aa  404  1e-111  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  47.29 
 
 
549 aa  399  9.999999999999999e-111  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  60.1 
 
 
572 aa  396  1e-109  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
542 aa  395  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
544 aa  397  1e-109  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.75 
 
 
532 aa  393  1e-108  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  57.04 
 
 
569 aa  394  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
519 aa  393  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  41.7 
 
 
678 aa  390  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
518 aa  384  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.26 
 
 
559 aa  385  1e-105  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  62.69 
 
 
559 aa  383  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  62.32 
 
 
615 aa  376  1e-103  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  56.6 
 
 
542 aa  376  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  67.77 
 
 
577 aa  376  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
514 aa  377  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  62.32 
 
 
615 aa  376  1e-103  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  39.42 
 
 
549 aa  374  1e-102  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.43 
 
 
512 aa  375  1e-102  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  68.49 
 
 
586 aa  373  1e-102  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  57.03 
 
 
578 aa  374  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
563 aa  372  1e-102  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  62.11 
 
 
595 aa  369  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  58.17 
 
 
570 aa  371  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  61.01 
 
 
583 aa  370  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.62 
 
 
598 aa  369  1e-101  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  50.12 
 
 
580 aa  369  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  65.33 
 
 
513 aa  369  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
527 aa  370  1e-101  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  60.23 
 
 
580 aa  367  1e-100  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  57.58 
 
 
543 aa  369  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  55.28 
 
 
608 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  56.23 
 
 
579 aa  368  1e-100  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  57.8 
 
 
600 aa  365  1e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  57.41 
 
 
598 aa  365  2e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  68.01 
 
 
516 aa  363  4e-99  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
549 aa  363  4e-99  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.62 
 
 
519 aa  363  4e-99  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  43.14 
 
 
545 aa  362  2e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  66.11 
 
 
522 aa  360  5e-98  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  65.02 
 
 
650 aa  360  5e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  66.11 
 
 
522 aa  360  5e-98  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
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