More than 300 homologs were found in PanDaTox collection
for query gene Gmet_0778 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_0778  response regulator receiver domain-containing protein  100 
 
 
142 aa  287  3e-77  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4377  multi-sensor signal transduction histidine kinase  48.53 
 
 
636 aa  130  6e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2120  multi-sensor signal transduction histidine kinase  44.37 
 
 
547 aa  120  7e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2122  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  45.19 
 
 
953 aa  120  8e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.0111685  n/a   
 
 
-
 
NC_012918  GM21_2098  multi-sensor signal transduction histidine kinase  43.61 
 
 
547 aa  119  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000413163 
 
 
-
 
NC_012918  GM21_2096  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.7 
 
 
953 aa  117  6e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000903564 
 
 
-
 
NC_010814  Glov_2422  response regulator receiver protein  47.62 
 
 
137 aa  114  6e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0876  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  45.97 
 
 
709 aa  113  7.999999999999999e-25  Geobacter uraniireducens Rf4  Bacteria  normal  0.0730078  n/a   
 
 
-
 
NC_007517  Gmet_2186  response regulator receiver sensor signal transduction histidine kinase  40.31 
 
 
381 aa  104  4e-22  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000654459  hitchhiker  0.000162526 
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  43.55 
 
 
396 aa  96.7  1e-19  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_012918  GM21_2195  multi-sensor signal transduction histidine kinase  38.46 
 
 
502 aa  95.9  2e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.067402 
 
 
-
 
NC_011146  Gbem_2024  multi-sensor signal transduction histidine kinase  40.18 
 
 
517 aa  95.5  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3210  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  40 
 
 
425 aa  94.7  4e-19  Geobacter lovleyi SZ  Bacteria  normal  0.141244  n/a   
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  36.3 
 
 
438 aa  91.3  4e-18  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_010814  Glov_0137  response regulator receiver protein  37.96 
 
 
150 aa  87.8  4e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  34.35 
 
 
365 aa  85.5  2e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  43.18 
 
 
226 aa  84.7  3e-16  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_008599  CFF8240_0377  DNA-binding response regulator  41.03 
 
 
226 aa  84.7  4e-16  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.306284  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  43.97 
 
 
226 aa  83.2  0.000000000000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1399  response regulator receiver modulated diguanylate cyclase  35.11 
 
 
476 aa  81.3  0.000000000000004  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1920  response regulator receiver  40.57 
 
 
226 aa  81.3  0.000000000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1837  DNA-binding response regulator  43.97 
 
 
226 aa  80.9  0.000000000000005  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.591446  n/a   
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  37.72 
 
 
304 aa  81.3  0.000000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_011898  Ccel_1982  two component transcriptional regulator, AraC family  36 
 
 
544 aa  80.1  0.000000000000009  Clostridium cellulolyticum H10  Bacteria  normal  0.184696  n/a   
 
 
-
 
NC_011899  Hore_19910  response regulator receiver protein  34.68 
 
 
386 aa  79.7  0.00000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0198  two component transcriptional regulator, AraC family  34.81 
 
 
534 aa  74.7  0.0000000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0281  multi-sensor signal transduction histidine kinase  34.62 
 
 
526 aa  74.7  0.0000000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.630164  n/a   
 
 
-
 
NC_009972  Haur_2123  two component AraC family transcriptional regulator  35.07 
 
 
414 aa  73.9  0.0000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.331776  n/a   
 
 
-
 
NC_009802  CCC13826_0005  response regulator receiver domain-containing protein  37.82 
 
 
229 aa  73.6  0.0000000000009  Campylobacter concisus 13826  Bacteria  normal  0.0566865  n/a   
 
 
-
 
NC_011883  Ddes_0769  two component, sigma54 specific, transcriptional regulator, Fis family  30.4 
 
 
453 aa  73.6  0.0000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.165448  n/a   
 
 
-
 
NC_013512  Sdel_0893  diguanylate cyclase  38.05 
 
 
566 aa  73.6  0.000000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0851  two component transcriptional regulator  36.75 
 
 
230 aa  72.8  0.000000000001  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0986  multi-sensor signal transduction histidine kinase  35.38 
 
 
487 aa  73.6  0.000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  29.41 
 
 
357 aa  72  0.000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2369  multi-sensor hybrid histidine kinase  30.15 
 
 
1316 aa  72  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1138  two component transcriptional regulator, AraC family  35 
 
 
519 aa  72.4  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0387  response regulator receiver modulated metal dependent phosphohydrolase  33.88 
 
 
487 aa  72  0.000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0207452  n/a   
 
 
-
 
NC_010001  Cphy_0864  two component AraC family transcriptional regulator  36.36 
 
 
503 aa  71.2  0.000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0460  response regulator receiver protein  37.61 
 
 
119 aa  71.2  0.000000000004  Thermosipho melanesiensis BI429  Bacteria  normal  0.903697  n/a   
 
 
-
 
NC_008261  CPF_1111  AraC family transcriptional regulator  37.38 
 
 
506 aa  71.2  0.000000000004  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0000128485  n/a   
 
 
-
 
NC_007575  Suden_0987  response regulator receiver domain-containing protein  36.61 
 
 
420 aa  70.9  0.000000000005  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0968  response regulator receiver domain-containing protein  35.04 
 
 
317 aa  70.9  0.000000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.730939  n/a   
 
 
-
 
NC_008554  Sfum_0828  multi-sensor signal transduction histidine kinase  31.01 
 
 
567 aa  70.5  0.000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  31.93 
 
 
343 aa  70.5  0.000000000007  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_010571  Oter_2405  response regulator receiver sensor signal transduction histidine kinase  31.16 
 
 
383 aa  70.5  0.000000000008  Opitutus terrae PB90-1  Bacteria  normal  0.109691  normal 
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  32.14 
 
 
465 aa  70.5  0.000000000008  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  30.58 
 
 
387 aa  69.7  0.00000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  33.88 
 
 
357 aa  69.7  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3036  response regulator receiver protein  36.36 
 
 
367 aa  69.7  0.00000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.697745  hitchhiker  0.00756104 
 
 
-
 
NC_008261  CPF_2344  AraC family DNA-binding response regulator  34.44 
 
 
507 aa  70.1  0.00000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.627636  n/a   
 
 
-
 
NC_008262  CPR_2056  AraC family DNA-binding response regulator  32.29 
 
 
507 aa  69.7  0.00000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2379  multi-sensor hybrid histidine kinase  29.6 
 
 
1509 aa  70.1  0.00000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1413  PAS/PAC sensor hybrid histidine kinase  33.9 
 
 
918 aa  69.7  0.00000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0913  response regulator receiver sensor hybrid histidine kinase  29.85 
 
 
544 aa  70.1  0.00000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  29.51 
 
 
473 aa  68.9  0.00000000002  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_011898  Ccel_0147  two component transcriptional regulator, AraC family  33.09 
 
 
525 aa  69.3  0.00000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0969  response regulator receiver domain-containing protein  34.09 
 
 
328 aa  68.9  0.00000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.749991  n/a   
 
 
-
 
NC_007575  Suden_0984  response regulator receiver/GGDEF/EAL domain-containing protein  26.67 
 
 
564 aa  69.3  0.00000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1396  response regulator receiver protein  36.54 
 
 
367 aa  69.3  0.00000000002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00425013  normal  0.314583 
 
 
-
 
NC_009654  Mmwyl1_3298  response regulator receiver protein  30.58 
 
 
121 aa  68.9  0.00000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1010  histidine kinase  32.14 
 
 
1347 aa  68.6  0.00000000003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.0363668  n/a   
 
 
-
 
NC_007794  Saro_1446  multi-sensor hybrid histidine kinase  33.33 
 
 
811 aa  68.6  0.00000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
460 aa  68.6  0.00000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0846  response regulator receiver protein  30.43 
 
 
139 aa  68.2  0.00000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00282438 
 
 
-
 
NC_013512  Sdel_0892  response regulator receiver  33.64 
 
 
233 aa  68.6  0.00000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  31.85 
 
 
460 aa  68.2  0.00000000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0240  Hpt sensor hybrid histidine kinase  38.33 
 
 
1005 aa  68.2  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1850  multi-sensor hybrid histidine kinase  31.75 
 
 
946 aa  67.8  0.00000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0866059  normal  0.191772 
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  33.64 
 
 
227 aa  67.8  0.00000000005  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  30.95 
 
 
458 aa  67.8  0.00000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  31.4 
 
 
388 aa  67.8  0.00000000005  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0685  response regulator receiver  29.31 
 
 
236 aa  67.4  0.00000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2355  two component Fis family transcriptional regulator  27.78 
 
 
465 aa  67.4  0.00000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.658958  n/a   
 
 
-
 
NC_011146  Gbem_2521  two component, sigma54 specific, transcriptional regulator, Fis family  32.8 
 
 
457 aa  67.4  0.00000000006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  33.88 
 
 
357 aa  67.4  0.00000000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_002939  GSU1417  response regulator  33.33 
 
 
141 aa  67  0.00000000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1899  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  32.31 
 
 
616 aa  67  0.00000000008  Geobacter lovleyi SZ  Bacteria  normal  0.764058  n/a   
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  30.58 
 
 
224 aa  67  0.00000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal 
 
 
-
 
NC_010511  M446_0655  multi-sensor hybrid histidine kinase  36.08 
 
 
864 aa  67  0.00000000008  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2546  response regulator receiver protein  35.24 
 
 
376 aa  67  0.00000000009  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1698  two component, sigma54 specific, transcriptional regulator, Fis family  32.8 
 
 
457 aa  67  0.00000000009  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000740904 
 
 
-
 
NC_009523  RoseRS_0337  response regulator receiver protein  29.5 
 
 
139 aa  67  0.00000000009  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0132867 
 
 
-
 
NC_010001  Cphy_3282  two component AraC family transcriptional regulator  35.87 
 
 
535 aa  67  0.00000000009  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1312  response regulator receiver protein  32.54 
 
 
367 aa  67  0.00000000009  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000399806  normal 
 
 
-
 
NC_008322  Shewmr7_1379  response regulator receiver protein  32.54 
 
 
367 aa  67  0.00000000009  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00673289  normal  0.16507 
 
 
-
 
NC_004347  SO_3196  response regulator  34.65 
 
 
367 aa  66.6  0.0000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_1697  periplasmic sensor hybrid histidine kinase  30.83 
 
 
907 aa  66.6  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_4133  multi-sensor hybrid histidine kinase  31.97 
 
 
1629 aa  66.6  0.0000000001  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1242  two component transcriptional regulator  34.96 
 
 
227 aa  66.2  0.0000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.546498  n/a   
 
 
-
 
NC_007575  Suden_1991  two component transcriptional regulator  31.06 
 
 
229 aa  66.6  0.0000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.656084  n/a   
 
 
-
 
NC_007643  Rru_A2820  multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA  37.61 
 
 
829 aa  66.6  0.0000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4205  multi-sensor hybrid histidine kinase  31.97 
 
 
1625 aa  66.6  0.0000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2344  response regulator receiver domain-containing protein  27.59 
 
 
135 aa  66.2  0.0000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0876  response regulator receiver  31.45 
 
 
526 aa  66.6  0.0000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00183507 
 
 
-
 
NC_010725  Mpop_0508  multi-sensor hybrid histidine kinase  31.54 
 
 
1215 aa  66.2  0.0000000001  Methylobacterium populi BJ001  Bacteria  normal  0.722414  normal  0.07841 
 
 
-
 
NC_007954  Sden_1366  sigma-54 factor, interaction region  31.78 
 
 
469 aa  66.6  0.0000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1584  two component AraC family transcriptional regulator  42.37 
 
 
259 aa  66.6  0.0000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1620  response regulator receiver protein  26.67 
 
 
127 aa  66.2  0.0000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0904485  n/a   
 
 
-
 
NC_011145  AnaeK_1525  response regulator receiver protein  26.67 
 
 
127 aa  66.2  0.0000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  33.01 
 
 
124 aa  66.2  0.0000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
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