More than 300 homologs were found in PanDaTox collection
for query gene Gmet_0661 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_00037  carbamoyl-phosphate synthase large subunit  51.07 
 
 
1073 aa  1085    Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3566  carbamoyl-phosphate synthase, large subunit  50.88 
 
 
1073 aa  1082    Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1276  carbamoyl-phosphate synthase, large subunit  53.28 
 
 
1081 aa  1119    Geobacter sulfurreducens PCA  Bacteria  normal  0.104945  n/a   
 
 
-
 
NC_002947  PP_4723  carbamoyl phosphate synthase large subunit  51.21 
 
 
1073 aa  1089    Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00575089 
 
 
-
 
NC_002977  MCA1852  carbamoyl-phosphate synthase, large subunit  51.72 
 
 
1072 aa  1098    Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1521  carbamoyl phosphate synthase large subunit  52.21 
 
 
1081 aa  1057    Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3458  carbamoyl phosphate synthase large subunit  49.53 
 
 
1071 aa  1047    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0327  carbamoyl phosphate synthase large subunit  47.3 
 
 
1089 aa  993    Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1042  carbamoyl phosphate synthase large subunit  46.88 
 
 
1060 aa  973    Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1488  carbamoyl phosphate synthase large subunit  47.06 
 
 
1162 aa  1008    Brucella suis 1330  Bacteria  normal  0.284371  n/a   
 
 
-
 
NC_004347  SO_1142  carbamoyl phosphate synthase large subunit  50.98 
 
 
1074 aa  1082    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4501  carbamoyl-phosphate synthase, large subunit  52.23 
 
 
1073 aa  1102    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0772  carbamoyl phosphate synthase large subunit  52.16 
 
 
1084 aa  1045    Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2678  carbamoyl-phosphate synthase large subunit  51.35 
 
 
1067 aa  1079    Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2550  carbamoyl-phosphate synthase large subunit  51.26 
 
 
1067 aa  1081    Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4191  carbamoyl phosphate synthase large subunit  52.14 
 
 
1073 aa  1102    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.725714  normal 
 
 
-
 
NC_007204  Psyc_0814  carbamoyl-phosphate synthase large subunit  50.71 
 
 
1084 aa  1085    Psychrobacter arcticus 273-4  Bacteria  normal  0.253705  normal  0.0427985 
 
 
-
 
NC_007298  Daro_0939  carbamoyl phosphate synthase large subunit  52.71 
 
 
1068 aa  1081    Dechloromonas aromatica RCB  Bacteria  normal  0.245842  normal 
 
 
-
 
NC_007333  Tfu_1057  carbamoyl-phosphate synthase large subunit  51 
 
 
1103 aa  1058    Thermobifida fusca YX  Bacteria  normal  0.614826  n/a   
 
 
-
 
NC_007335  PMN2A_0226  carbamoyl phosphate synthase large subunit  48.46 
 
 
1102 aa  1047    Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2175  carbamoyl phosphate synthase large subunit  52.34 
 
 
1082 aa  1060    Ralstonia eutropha JMP134  Bacteria  normal  0.321083  n/a   
 
 
-
 
NC_007354  Ecaj_0635  carbamoyl phosphate synthase large subunit  45.64 
 
 
1076 aa  977    Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2374  carbamoyl phosphate synthase large subunit  48.61 
 
 
1071 aa  1018    Methanosarcina barkeri str. Fusaro  Archaea  normal  0.128175  normal  0.572238 
 
 
-
 
NC_007404  Tbd_1128  carbamoyl-phosphate synthase large subunit  52.8 
 
 
1068 aa  1083    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2449  carbamoyl phosphate synthase large subunit  47.45 
 
 
1154 aa  1024    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.060664  normal  0.634993 
 
 
-
 
NC_007413  Ava_1893  carbamoyl phosphate synthase large subunit  51.09 
 
 
1097 aa  1100    Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.457655 
 
 
-
 
NC_007434  BURPS1710b_1610  carbamoyl phosphate synthase large subunit  52.16 
 
 
1084 aa  1045    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2572  carbamoyl-phosphate synthase, large subunit, glutamine-dependent  52.24 
 
 
1073 aa  1109    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0164695  n/a   
 
 
-
 
NC_007492  Pfl01_0767  carbamoyl phosphate synthase large subunit  52.05 
 
 
1073 aa  1103    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.256868  normal  0.1584 
 
 
-
 
NC_007493  RSP_0818  carbamoyl phosphate synthase large subunit  49.82 
 
 
1113 aa  1001    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.459239  n/a   
 
 
-
 
NC_007498  Pcar_1612  carbamoyl-phosphate synthase large subunit  51.98 
 
 
1084 aa  1090    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000225246  n/a   
 
 
-
 
NC_007510  Bcep18194_A4434  carbamoyl phosphate synthase large subunit  52.16 
 
 
1084 aa  1046    Burkholderia sp. 383  Bacteria  normal  0.901891  normal 
 
 
-
 
NC_007513  Syncc9902_0836  carbamoyl phosphate synthase large subunit  50.23 
 
 
1106 aa  1056    Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1819  carbamoyl phosphate synthase large subunit  49.82 
 
 
1107 aa  1064    Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0661  carbamoyl phosphate synthase large subunit  100 
 
 
1066 aa  2181    Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00149325  normal  0.138255 
 
 
-
 
NC_007517  Gmet_1774  carbamoyl-phosphate synthase large subunit  52.26 
 
 
1081 aa  1120    Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000157385  normal  0.0854041 
 
 
-
 
NC_007519  Dde_0333  carbamoyl-phosphate synthase large subunit  51.67 
 
 
1087 aa  1103    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.639877  n/a   
 
 
-
 
NC_007520  Tcr_0879  carbamoyl-phosphate synthase, large subunit  50.33 
 
 
1070 aa  1043    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1467  carbamoyl phosphate synthase large subunit  46.94 
 
 
1085 aa  991    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0975  carbamoyl-phosphate synthase large subunit  47.91 
 
 
1098 aa  1026    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0711  carbamoyl phosphate synthase large subunit  51.82 
 
 
1097 aa  1110    Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0479  carbamoyl-phosphate synthase, large subunit  53.08 
 
 
1075 aa  1077    Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2886  carbamoyl phosphate synthase large subunit  50.64 
 
 
1082 aa  1070    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.827795  n/a   
 
 
-
 
NC_007651  BTH_I2781  carbamoyl phosphate synthase large subunit  52.07 
 
 
1084 aa  1042    Burkholderia thailandensis E264  Bacteria  normal  0.0855395  n/a   
 
 
-
 
NC_007760  Adeh_1729  carbamoyl phosphate synthase large subunit  52.54 
 
 
1077 aa  1112    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3514  carbamoyl phosphate synthase large subunit  77.98 
 
 
1067 aa  1679    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.191871  n/a   
 
 
-
 
NC_007777  Francci3_3198  carbamoyl phosphate synthase large subunit  49.45 
 
 
1130 aa  1024    Frankia sp. CcI3  Bacteria  decreased coverage  0.00397433  normal 
 
 
-
 
NC_007778  RPB_1516  carbamoyl phosphate synthase large subunit  49.15 
 
 
1109 aa  1049    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2230  carbamoyl phosphate synthase large subunit  50.99 
 
 
1107 aa  1072    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.497608  n/a   
 
 
-
 
NC_007796  Mhun_0115  carbamoyl phosphate synthase large subunit  49.67 
 
 
1056 aa  989    Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007799  ECH_0378  carbamoyl phosphate synthase large subunit  46.12 
 
 
1076 aa  979    Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.546328  n/a   
 
 
-
 
NC_007802  Jann_1063  carbamoyl phosphate synthase large subunit  47.98 
 
 
1110 aa  999    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2006  carbamoyl-phosphate synthase, large subunit  51.36 
 
 
1098 aa  1052    Rhodoferax ferrireducens T118  Bacteria  normal  0.488825  n/a   
 
 
-
 
NC_007912  Sde_2728  carbamoyl phosphate synthase large subunit  50.37 
 
 
1077 aa  1088    Saccharophagus degradans 2-40  Bacteria  normal  0.523784  normal 
 
 
-
 
NC_007925  RPC_3835  carbamoyl phosphate synthase large subunit  47.97 
 
 
1154 aa  1039    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.863015  normal  0.842487 
 
 
-
 
NC_007947  Mfla_0779  carbamoyl-phosphate synthase large subunit  53.27 
 
 
1068 aa  1123    Methylobacillus flagellatus KT  Bacteria  normal  0.0332696  hitchhiker  0.000231672 
 
 
-
 
NC_007948  Bpro_2678  carbamoyl-phosphate synthase large subunit  52.77 
 
 
1076 aa  1049    Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1257  carbamoyl phosphate synthase large subunit  51.42 
 
 
1084 aa  1039    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0996  carbamoyl phosphate synthase large subunit  51.12 
 
 
1075 aa  1085    Shewanella denitrificans OS217  Bacteria  normal  0.846706  n/a   
 
 
-
 
NC_007955  Mbur_0872  carbamoyl phosphate synthase large subunit  48.11 
 
 
1075 aa  1036    Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007958  RPD_1457  carbamoyl phosphate synthase large subunit  49.33 
 
 
1109 aa  1045    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_3085  carbamoyl-phosphate synthase large subunit  51.26 
 
 
1076 aa  1082    Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2875  carbamoyl phosphate synthase large subunit  47.45 
 
 
1154 aa  1028    Nitrobacter hamburgensis X14  Bacteria  normal  0.712522  n/a   
 
 
-
 
NC_007969  Pcryo_0829  carbamoyl-phosphate synthase, large subunit  50.71 
 
 
1112 aa  1082    Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2193  carbamoyl phosphate synthase large subunit  52.16 
 
 
1082 aa  1051    Cupriavidus metallidurans CH34  Bacteria  normal  0.0442347  normal  0.129534 
 
 
-
 
NC_008009  Acid345_2197  carbamoyl-phosphate synthase large subunit  51.01 
 
 
1102 aa  1073    Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0632  carbamoyl phosphate synthase large subunit  49.42 
 
 
1120 aa  1028    Ruegeria sp. TM1040  Bacteria  normal  0.298922  normal  0.175677 
 
 
-
 
NC_008048  Sala_0985  carbamoyl phosphate synthase large subunit  51.31 
 
 
1106 aa  1080    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.557617  normal 
 
 
-
 
NC_008060  Bcen_0811  carbamoyl phosphate synthase large subunit  52.07 
 
 
1084 aa  1044    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2367  carbamoyl phosphate synthase large subunit  48.38 
 
 
1112 aa  1009    Mycobacterium sp. MCS  Bacteria  normal  0.817973  n/a   
 
 
-
 
NC_008148  Rxyl_1477  carbamoyl-phosphate synthase large subunit  50.56 
 
 
1054 aa  1009    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.438417  n/a   
 
 
-
 
NC_008228  Patl_2214  carbamoyl phosphate synthase large subunit  51.12 
 
 
1072 aa  1090    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.173726  n/a   
 
 
-
 
NC_008254  Meso_2095  carbamoyl phosphate synthase large subunit  47.85 
 
 
1162 aa  1040    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2877  carbamoyl phosphate synthase large subunit  51.3 
 
 
1076 aa  1073    Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.1435 
 
 
-
 
NC_008321  Shewmr4_0966  carbamoyl phosphate synthase large subunit  51.31 
 
 
1074 aa  1086    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1004  carbamoyl phosphate synthase large subunit  51.31 
 
 
1074 aa  1086    Shewanella sp. MR-7  Bacteria  normal  0.777466  normal  0.846919 
 
 
-
 
NC_008340  Mlg_1981  carbamoyl-phosphate synthase large subunit  53.71 
 
 
1078 aa  1107    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  decreased coverage  0.00635498 
 
 
-
 
NC_008345  Sfri_0976  carbamoyl phosphate synthase large subunit  50 
 
 
1073 aa  1070    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2138  carbamoyl phosphate synthase large subunit  50.47 
 
 
1085 aa  1023    Maricaulis maris MCS10  Bacteria  normal  normal  0.0923584 
 
 
-
 
NC_008390  Bamb_1169  carbamoyl phosphate synthase large subunit  51.88 
 
 
1084 aa  1030    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_62910  carbamoyl phosphate synthase large subunit  51.58 
 
 
1073 aa  1092    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008531  LEUM_1207  carbamoyl-phosphate synthase large subunit  47.16 
 
 
1059 aa  977    Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0559  carbamoyl phosphate synthase large subunit  47.84 
 
 
1059 aa  987    Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2262  carbamoyl phosphate synthase large subunit  49.04 
 
 
1099 aa  1026    Arthrobacter sp. FB24  Bacteria  normal  0.133094  n/a   
 
 
-
 
NC_008542  Bcen2424_1292  carbamoyl phosphate synthase large subunit  52.07 
 
 
1084 aa  1044    Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1254  carbamoyl phosphate synthase large subunit  49.4 
 
 
1074 aa  1038    Methanosaeta thermophila PT  Archaea  normal  0.179154  n/a   
 
 
-
 
NC_008554  Sfum_0008  carbamoyl phosphate synthase large subunit  52.98 
 
 
1080 aa  1100    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.196188  normal 
 
 
-
 
NC_008554  Sfum_3911  carbamoyl phosphate synthase large subunit  74.3 
 
 
1066 aa  1602    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.123492 
 
 
-
 
NC_008576  Mmc1_3018  carbamoyl-phosphate synthase large subunit  53.43 
 
 
1074 aa  1119    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0968  carbamoyl phosphate synthase large subunit  51.4 
 
 
1074 aa  1089    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1298  carbamoyl-phosphate synthase large subunit  50.18 
 
 
1093 aa  1040    Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.0243124 
 
 
-
 
NC_008599  CFF8240_0319  carbamoyl phosphate synthase large subunit  47.49 
 
 
1084 aa  1018    Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2524  carbamoyl-phosphate synthase, large subunit  53.48 
 
 
1078 aa  1127    Pelobacter propionicus DSM 2379  Bacteria  normal  0.0237548  n/a   
 
 
-
 
NC_008686  Pden_1879  carbamoyl phosphate synthase large subunit  50.31 
 
 
1110 aa  1046    Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.99136 
 
 
-
 
NC_008699  Noca_2431  carbamoyl-phosphate synthase large subunit  47.64 
 
 
1143 aa  982    Nocardioides sp. JS614  Bacteria  normal  0.133132  n/a   
 
 
-
 
NC_008700  Sama_2503  carbamoyl phosphate synthase large subunit  50.47 
 
 
1076 aa  1084    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_2414  carbamoyl phosphate synthase large subunit  48.38 
 
 
1112 aa  1009    Mycobacterium sp. KMS  Bacteria  normal  0.271398  normal  0.318582 
 
 
-
 
NC_008709  Ping_0897  carbamoyl phosphate synthase large subunit  50.42 
 
 
1076 aa  1033    Psychromonas ingrahamii 37  Bacteria  normal  normal  0.641004 
 
 
-
 
NC_008726  Mvan_2664  carbamoyl phosphate synthase large subunit  47.85 
 
 
1112 aa  1003    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.652847  normal 
 
 
-
 
NC_008740  Maqu_3358  carbamoyl-phosphate synthase, large subunit  50.74 
 
 
1072 aa  1083    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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