60 homologs were found in PanDaTox collection
for query gene Gmet_0507 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_0507  hypothetical protein  100 
 
 
123 aa  250  4.0000000000000004e-66  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000108324  normal 
 
 
-
 
NC_002939  GSU2970  hypothetical protein  80.21 
 
 
96 aa  168  2e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0287  stress responsive alpha-beta barrel domain-containing protein  71.58 
 
 
96 aa  150  8e-36  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0356838  n/a   
 
 
-
 
NC_010814  Glov_3454  Stress responsive alpha-beta barrel domain protein  70.83 
 
 
96 aa  145  1.0000000000000001e-34  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3290  Stress responsive alpha-beta barrel domain protein  59.57 
 
 
96 aa  119  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000104103  n/a   
 
 
-
 
NC_012918  GM21_0958  Stress responsive alpha-beta barrel domain protein  59.57 
 
 
96 aa  119  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    normal  0.476404 
 
 
-
 
NC_009253  Dred_1344  stress responsive alpha-beta barrel domain-containing protein  60.42 
 
 
93 aa  117  3.9999999999999996e-26  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000346703  n/a   
 
 
-
 
NC_011898  Ccel_1340  Stress responsive alpha-beta barrel domain protein  53.12 
 
 
95 aa  108  3e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000112014  n/a   
 
 
-
 
NC_013512  Sdel_2262  Stress responsive alpha-beta barrel domain protein  44.21 
 
 
95 aa  85.5  2e-16  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.00000000422116  n/a   
 
 
-
 
NC_008942  Mlab_0038  hypothetical protein  43.62 
 
 
94 aa  80.1  0.00000000000001  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_008261  CPF_0844  stress responsive alpha-beta barrel domain-containing protein  41.18 
 
 
100 aa  77.8  0.00000000000004  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.000441195  n/a   
 
 
-
 
NC_009135  MmarC5_0695  stress responsive alpha-beta barrel domain-containing protein  39 
 
 
100 aa  73.2  0.000000000001  Methanococcus maripaludis C5  Archaea  normal  0.136948  n/a   
 
 
-
 
NC_009637  MmarC7_0135  stress responsive alpha-beta barrel domain-containing protein  38 
 
 
100 aa  73.2  0.000000000001  Methanococcus maripaludis C7  Archaea  normal  0.808117  normal  0.067854 
 
 
-
 
NC_013517  Sterm_4109  Stress responsive alpha-beta barrel domain protein  35.42 
 
 
95 aa  71.6  0.000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1768  stress responsive alpha-beta barrel domain-containing protein  38.24 
 
 
100 aa  71.6  0.000000000003  Methanococcus maripaludis C6  Archaea  normal  0.16129  n/a   
 
 
-
 
NC_011060  Ppha_1149  Stress responsive alpha-beta barrel domain protein  39.42 
 
 
111 aa  68.2  0.00000000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.565535  n/a   
 
 
-
 
NC_008554  Sfum_1221  stress responsive alpha-beta barrel domain-containing protein  42.35 
 
 
107 aa  67.8  0.00000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000118757  normal  0.123 
 
 
-
 
NC_013595  Sros_6606  hypothetical protein  41.41 
 
 
93 aa  66.6  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.375256  normal  0.199079 
 
 
-
 
NC_008391  Bamb_3334  stress responsive alpha-beta barrel domain-containing protein  43.75 
 
 
116 aa  66.2  0.0000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.0814828  normal  0.886837 
 
 
-
 
NC_008785  BMASAVP1_A1924  hypothetical protein  37.4 
 
 
147 aa  65.5  0.0000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3380  hypothetical protein  40.4 
 
 
104 aa  64.7  0.0000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.30836  n/a   
 
 
-
 
NC_009076  BURPS1106A_2328  hypothetical protein  40.4 
 
 
104 aa  64.7  0.0000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.445625  n/a   
 
 
-
 
NC_009675  Anae109_0108  stress responsive alpha-beta barrel domain-containing protein  38.24 
 
 
102 aa  64.7  0.0000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.142964  normal  0.279268 
 
 
-
 
NC_010511  M446_1959  stress responsive alpha-beta barrel domain-containing protein  37.76 
 
 
101 aa  64.7  0.0000000004  Methylobacterium sp. 4-46  Bacteria  normal  0.44914  normal 
 
 
-
 
NC_007575  Suden_1324  hypothetical protein  35.79 
 
 
96 aa  65.1  0.0000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.607655  n/a   
 
 
-
 
NC_009074  BURPS668_2289  hypothetical protein  40.4 
 
 
190 aa  63.9  0.0000000007  Burkholderia pseudomallei 668  Bacteria  normal  0.0229894  n/a   
 
 
-
 
NC_007434  BURPS1710b_2451  stress responsive A/B barrel domain family protein  37.4 
 
 
256 aa  63.9  0.0000000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2146  hypothetical protein  38.61 
 
 
300 aa  63.9  0.0000000008  Burkholderia thailandensis E264  Bacteria  normal  0.430539  n/a   
 
 
-
 
NC_013223  Dret_2493  Stress responsive alpha-beta barrel domain protein  35.35 
 
 
100 aa  62.8  0.000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4139  antibiotic biosynthesis monooxygenase  43.59 
 
 
107 aa  62  0.000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1326  stress responsive alpha-beta barrel domain-containing protein  40.51 
 
 
100 aa  61.6  0.000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.341871 
 
 
-
 
NC_013173  Dbac_1501  Stress responsive alpha-beta barrel domain protein  40 
 
 
100 aa  61.2  0.000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0033  stress responsive alpha-beta barrel domain-containing protein  30 
 
 
100 aa  59.3  0.00000001  Methanococcus vannielii SB  Archaea  normal  0.412966  n/a   
 
 
-
 
NC_008541  Arth_2288  stress responsive alpha-beta barrel domain-containing protein  40 
 
 
109 aa  58.2  0.00000003  Arthrobacter sp. FB24  Bacteria  normal  0.419964  n/a   
 
 
-
 
NC_008390  Bamb_1838  stress responsive alpha-beta barrel domain-containing protein  37.62 
 
 
104 aa  58.2  0.00000004  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1810  stress responsive alpha-beta barrel domain-containing protein  37.62 
 
 
104 aa  58.2  0.00000004  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.479617 
 
 
-
 
NC_007510  Bcep18194_A4485  hypothetical protein  39.74 
 
 
100 aa  57.8  0.00000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4612  stress responsive alpha-beta barrel domain-containing protein  41.03 
 
 
106 aa  56.2  0.0000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.356397  normal 
 
 
-
 
NC_007510  Bcep18194_A5200  hypothetical protein  36.36 
 
 
104 aa  54.7  0.0000004  Burkholderia sp. 383  Bacteria  normal  normal  0.348599 
 
 
-
 
NC_010084  Bmul_1373  stress responsive alpha-beta barrel domain-containing protein  37.97 
 
 
104 aa  53.9  0.0000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1923  stress responsive alpha-beta barrel domain-containing protein  35.35 
 
 
104 aa  53.9  0.0000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.403494 
 
 
-
 
NC_010524  Lcho_0836  stress responsive alpha-beta barrel domain-containing protein  34.62 
 
 
102 aa  53.9  0.0000007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008542  Bcen2424_1900  stress responsive alpha-beta barrel domain-containing protein  34.34 
 
 
164 aa  52.4  0.000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1419  stress responsive alpha-beta barrel domain-containing protein  34 
 
 
100 aa  52.8  0.000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0498307  n/a   
 
 
-
 
NC_008062  Bcen_6179  stress responsive alpha-beta barrel  34.34 
 
 
164 aa  52.4  0.000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.380845  n/a   
 
 
-
 
NC_007512  Plut_0917  hypothetical protein  30 
 
 
101 aa  48.9  0.00002  Chlorobium luteolum DSM 273  Bacteria  normal  0.772962  normal 
 
 
-
 
NC_013161  Cyan8802_1498  Stress responsive alpha-beta barrel domain protein  26.04 
 
 
97 aa  47  0.00008  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1471  Stress responsive alpha-beta barrel domain protein  26.04 
 
 
97 aa  47  0.00008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_0763  hypothetical protein  32.43 
 
 
97 aa  46.2  0.0002  Thermobifida fusca YX  Bacteria  normal  0.638539  n/a   
 
 
-
 
NC_007948  Bpro_2568  stress responsive alpha-beta barrel  29.47 
 
 
113 aa  45.8  0.0002  Polaromonas sp. JS666  Bacteria  normal  0.152211  normal  0.531135 
 
 
-
 
NC_011769  DvMF_2244  Stress responsive alpha-beta barrel domain protein  29 
 
 
101 aa  45.4  0.0003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0264  stress responsive alpha-beta barrel domain-containing protein  31 
 
 
101 aa  45.4  0.0003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2425  Stress responsive alpha-beta barrel domain protein  32.53 
 
 
146 aa  45.1  0.0004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0720467  n/a   
 
 
-
 
NC_007912  Sde_1763  transcription-repair coupling factor  34.88 
 
 
108 aa  44.3  0.0006  Saccharophagus degradans 2-40  Bacteria  normal  0.356996  normal 
 
 
-
 
NC_008699  Noca_0590  stress responsive alpha-beta barrel domain-containing protein  32.89 
 
 
99 aa  43.9  0.0008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1144  stress responsive alpha-beta barrel  39.51 
 
 
157 aa  43.1  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.17953  n/a   
 
 
-
 
NC_013595  Sros_8969  hypothetical protein  29.47 
 
 
97 aa  43.5  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1037  stress responsive alpha-beta barrel domain-containing protein  29.79 
 
 
99 aa  42.7  0.002  Salinispora tropica CNB-440  Bacteria  normal  0.463523  normal 
 
 
-
 
NC_013730  Slin_0488  Stress responsive alpha-beta barrel domain protein  32.63 
 
 
133 aa  41.6  0.004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.152282 
 
 
-
 
NC_008312  Tery_0681  stress responsive alpha-beta barrel  23.96 
 
 
97 aa  41.2  0.005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0110519 
 
 
-
 
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