More than 300 homologs were found in PanDaTox collection
for query gene Gbro_2881 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_2881  response regulator receiver  100 
 
 
220 aa  427  1e-119  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  60.58 
 
 
207 aa  239  2e-62  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  56.73 
 
 
205 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  61.72 
 
 
208 aa  214  6e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  54.93 
 
 
212 aa  214  1e-54  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  54.81 
 
 
222 aa  209  2e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  54.33 
 
 
207 aa  207  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  55.77 
 
 
211 aa  206  2e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  51.55 
 
 
208 aa  193  2e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  54.38 
 
 
211 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  51.36 
 
 
222 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  52.56 
 
 
218 aa  192  4e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  52.88 
 
 
209 aa  191  8e-48  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  53.88 
 
 
212 aa  189  3e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  50.48 
 
 
206 aa  188  6e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_013235  Namu_3632  two component transcriptional regulator, LuxR family  55.98 
 
 
209 aa  188  7e-47  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00835522  normal  0.0174868 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.17 
 
 
213 aa  188  7e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.55 
 
 
209 aa  183  2e-45  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  48.13 
 
 
228 aa  183  2e-45  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  48.97 
 
 
208 aa  182  3e-45  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  50 
 
 
207 aa  182  5e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  51.67 
 
 
209 aa  181  1e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  52.38 
 
 
210 aa  179  2e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  49.52 
 
 
211 aa  178  7e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  47.14 
 
 
217 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  49.53 
 
 
214 aa  175  5e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  48.11 
 
 
213 aa  174  1e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  50.24 
 
 
213 aa  172  3e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  49.76 
 
 
234 aa  171  6e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  50.48 
 
 
216 aa  171  9e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  48.33 
 
 
207 aa  169  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  51.14 
 
 
209 aa  169  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  47.14 
 
 
206 aa  167  9e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  46.7 
 
 
209 aa  165  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  48.06 
 
 
212 aa  163  2e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.95 
 
 
223 aa  161  7e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  41.82 
 
 
224 aa  160  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  45.5 
 
 
209 aa  156  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  43.19 
 
 
217 aa  156  2e-37  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  43.18 
 
 
219 aa  156  3e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  45.41 
 
 
230 aa  155  4e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.59 
 
 
226 aa  154  1e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  43.98 
 
 
225 aa  154  1e-36  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  46.04 
 
 
209 aa  153  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.39 
 
 
214 aa  153  2e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  43.5 
 
 
226 aa  152  3e-36  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  38.01 
 
 
218 aa  152  4e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  44.34 
 
 
213 aa  151  6e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  45.62 
 
 
216 aa  150  1e-35  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.55 
 
 
216 aa  150  2e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  39.35 
 
 
222 aa  150  2e-35  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  44.55 
 
 
222 aa  150  2e-35  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  45.02 
 
 
224 aa  149  3e-35  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.95 
 
 
230 aa  149  3e-35  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  42.58 
 
 
207 aa  149  4e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  43.06 
 
 
218 aa  148  6e-35  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  44.29 
 
 
223 aa  148  6e-35  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  45.79 
 
 
219 aa  148  8e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  43.89 
 
 
224 aa  147  9e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  43.6 
 
 
213 aa  147  1e-34  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  43.58 
 
 
222 aa  147  1e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  44.2 
 
 
227 aa  147  1e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  43.52 
 
 
221 aa  147  1e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  42.79 
 
 
218 aa  146  2e-34  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  44.95 
 
 
221 aa  146  2e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  45.89 
 
 
211 aa  146  2e-34  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  42.53 
 
 
224 aa  146  2e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  41.74 
 
 
219 aa  146  3e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  44.24 
 
 
217 aa  145  4e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  46.54 
 
 
230 aa  145  4e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  42.03 
 
 
216 aa  145  4e-34  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.34 
 
 
239 aa  145  4e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  44.44 
 
 
207 aa  145  5e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  39.39 
 
 
253 aa  145  5e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.13 
 
 
225 aa  145  6e-34  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  39.72 
 
 
224 aa  144  7e-34  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  42.06 
 
 
221 aa  144  1e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  2.10563e-05  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  43.78 
 
 
217 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  41.78 
 
 
229 aa  144  1e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  44.59 
 
 
225 aa  144  1e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  40.17 
 
 
234 aa  143  2e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  43.35 
 
 
216 aa  143  2e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  45.02 
 
 
227 aa  143  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  41.67 
 
 
230 aa  144  2e-33  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  39.91 
 
 
238 aa  143  2e-33  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  41.74 
 
 
232 aa  143  2e-33  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  40.83 
 
 
232 aa  142  3e-33  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  43.35 
 
 
244 aa  143  3e-33  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  40.19 
 
 
224 aa  142  3e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  40.19 
 
 
224 aa  142  3e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  43.32 
 
 
218 aa  142  3e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  41.23 
 
 
230 aa  142  3e-33  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  41.94 
 
 
221 aa  142  4e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  44.08 
 
 
209 aa  142  4e-33  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  41.71 
 
 
209 aa  142  4e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  40.35 
 
 
228 aa  142  5e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  41.28 
 
 
232 aa  142  5e-33  Dehalococcoides sp. VS  Bacteria  hitchhiker  1.20759e-05  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  39.61 
 
 
219 aa  141  6e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  43.54 
 
 
213 aa  142  6e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  41.59 
 
 
217 aa  141  7e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
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