More than 300 homologs were found in PanDaTox collection
for query gene Gbro_2014 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  100 
 
 
268 aa  536  1e-151  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  66.42 
 
 
268 aa  354  6.999999999999999e-97  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  64.66 
 
 
268 aa  339  4e-92  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  64.66 
 
 
268 aa  338  4e-92  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  63.06 
 
 
268 aa  335  3.9999999999999995e-91  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_009338  Mflv_2545  short-chain dehydrogenase/reductase SDR  63.16 
 
 
268 aa  331  8e-90  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.522448  normal 
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  62.03 
 
 
268 aa  324  8.000000000000001e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  64.82 
 
 
255 aa  324  9e-88  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_014158  Tpau_0582  short-chain dehydrogenase/reductase SDR  50 
 
 
266 aa  238  5.999999999999999e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  45.8 
 
 
273 aa  196  3e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  43.41 
 
 
267 aa  181  9.000000000000001e-45  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  42.58 
 
 
262 aa  176  3e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  42.36 
 
 
258 aa  169  5e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  38.98 
 
 
262 aa  159  5e-38  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  40.6 
 
 
267 aa  159  5e-38  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  40.6 
 
 
267 aa  159  5e-38  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  40.6 
 
 
267 aa  159  6e-38  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  40.08 
 
 
255 aa  157  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  39.11 
 
 
266 aa  152  5.9999999999999996e-36  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  42.86 
 
 
259 aa  150  2e-35  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  39.06 
 
 
258 aa  149  3e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  40.64 
 
 
259 aa  149  4e-35  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.37 
 
 
266 aa  149  5e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  40 
 
 
262 aa  148  1.0000000000000001e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  40 
 
 
259 aa  146  3e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  43.81 
 
 
256 aa  146  4.0000000000000006e-34  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  39.76 
 
 
259 aa  145  5e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  38.28 
 
 
258 aa  142  5e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  42.41 
 
 
256 aa  142  5e-33  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  36 
 
 
256 aa  141  9.999999999999999e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  36.82 
 
 
266 aa  141  9.999999999999999e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  35.6 
 
 
263 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  36.58 
 
 
261 aa  140  1.9999999999999998e-32  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  39.68 
 
 
262 aa  140  1.9999999999999998e-32  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  37.21 
 
 
259 aa  139  6e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  39.29 
 
 
262 aa  139  7e-32  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  39.29 
 
 
262 aa  139  7e-32  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  39.06 
 
 
259 aa  138  8.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  33.46 
 
 
273 aa  138  1e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_006369  lpl1378  hypothetical protein  31.66 
 
 
259 aa  137  2e-31  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  36.19 
 
 
261 aa  137  2e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  33.33 
 
 
258 aa  137  2e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  32.05 
 
 
259 aa  136  3.0000000000000003e-31  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  39.11 
 
 
263 aa  136  3.0000000000000003e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  37.5 
 
 
269 aa  136  4e-31  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  37.25 
 
 
269 aa  135  5e-31  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.92 
 
 
258 aa  135  7.000000000000001e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  39.11 
 
 
253 aa  135  8e-31  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  41.8 
 
 
266 aa  134  9.999999999999999e-31  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.66 
 
 
271 aa  134  9.999999999999999e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  38.21 
 
 
258 aa  133  3.9999999999999996e-30  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  36 
 
 
267 aa  132  6.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  37.8 
 
 
259 aa  131  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  38.03 
 
 
268 aa  131  1.0000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_002947  PP_0429  short chain dehydrogenase/reductase family oxidoreductase  38.61 
 
 
260 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  normal  0.406504 
 
 
-
 
NC_009512  Pput_0462  short-chain dehydrogenase/reductase SDR  38.82 
 
 
260 aa  130  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  0.767614  hitchhiker  0.00534124 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  37.31 
 
 
291 aa  130  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  33.97 
 
 
267 aa  130  2.0000000000000002e-29  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  32.16 
 
 
258 aa  130  2.0000000000000002e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_010322  PputGB1_0459  short-chain dehydrogenase/reductase SDR  38.43 
 
 
260 aa  129  3e-29  Pseudomonas putida GB-1  Bacteria  normal  normal  0.240703 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  37.5 
 
 
283 aa  129  5.0000000000000004e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.47 
 
 
264 aa  129  6e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  35.27 
 
 
260 aa  129  6e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  36.55 
 
 
269 aa  129  6e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_008599  CFF8240_0977  NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg  37.45 
 
 
248 aa  129  7.000000000000001e-29  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.616956  n/a   
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  41.53 
 
 
275 aa  127  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  32.3 
 
 
264 aa  128  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  38.67 
 
 
268 aa  127  2.0000000000000002e-28  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  36.88 
 
 
277 aa  127  2.0000000000000002e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  38.13 
 
 
262 aa  126  3e-28  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  36.84 
 
 
264 aa  126  4.0000000000000003e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  36.36 
 
 
298 aa  125  5e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.08 
 
 
257 aa  125  5e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  40.84 
 
 
266 aa  125  5e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  33.98 
 
 
257 aa  125  5e-28  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  36.18 
 
 
252 aa  125  6e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  35.89 
 
 
253 aa  124  1e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  35.86 
 
 
275 aa  125  1e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  40.32 
 
 
269 aa  124  2e-27  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_1418  short chain dehydrogenase/reductase family oxidoreductase  36.82 
 
 
248 aa  124  2e-27  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.0000653973  n/a   
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  37.04 
 
 
263 aa  124  2e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  39.68 
 
 
266 aa  124  2e-27  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  34.55 
 
 
262 aa  124  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  33.2 
 
 
269 aa  124  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  34.55 
 
 
250 aa  123  3e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  37.65 
 
 
259 aa  122  6e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  42.86 
 
 
265 aa  122  6e-27  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  32.68 
 
 
256 aa  122  7e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  32.44 
 
 
257 aa  122  8e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  35.34 
 
 
344 aa  121  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  30.43 
 
 
265 aa  121  9.999999999999999e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  33.99 
 
 
255 aa  121  1.9999999999999998e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  43.78 
 
 
265 aa  120  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  30.74 
 
 
257 aa  120  1.9999999999999998e-26  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  36.96 
 
 
267 aa  120  3e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  29.92 
 
 
262 aa  120  3e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  38.71 
 
 
258 aa  120  3e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  32.67 
 
 
257 aa  120  3e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  34.65 
 
 
253 aa  119  3.9999999999999996e-26  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  37.3 
 
 
266 aa  119  3.9999999999999996e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
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