More than 300 homologs were found in PanDaTox collection
for query gene Gbem_0428 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  100 
 
 
219 aa  431  1e-120  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  95.89 
 
 
219 aa  414  9.999999999999999e-116  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  55.22 
 
 
210 aa  224  5.0000000000000005e-58  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  31.03 
 
 
217 aa  132  6e-30  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  39.09 
 
 
206 aa  131  7.999999999999999e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  39.09 
 
 
206 aa  131  7.999999999999999e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  36.6 
 
 
205 aa  130  2.0000000000000002e-29  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_010682  Rpic_3226  multiple antibiotic resistance (MarC)-related protein  33.83 
 
 
207 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A3108  multiple antibiotic resistance (MarC)-related proteins  28.99 
 
 
207 aa  126  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2949  hypothetical protein  32.66 
 
 
207 aa  125  3e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.514078  normal 
 
 
-
 
NC_007796  Mhun_1498  multiple antibiotic resistance (MarC)-related proteins  31.82 
 
 
219 aa  125  7e-28  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  36.04 
 
 
209 aa  124  1e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  36 
 
 
203 aa  124  1e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_011206  Lferr_0055  multiple antibiotic resistance (MarC)-related protein  35 
 
 
218 aa  123  2e-27  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0468967  normal  0.907646 
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  35 
 
 
216 aa  123  2e-27  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_007204  Psyc_0635  multiple antibiotic resistance (MarC)-related proteins  35 
 
 
201 aa  122  6e-27  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.586575 
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  29.65 
 
 
206 aa  121  7e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2679  multiple antibiotic resistance (MarC)-related proteins  30.5 
 
 
206 aa  121  7e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.356849  n/a   
 
 
-
 
NC_008542  Bcen2424_0428  multiple antibiotic resistance (MarC)-related proteins  30.5 
 
 
206 aa  121  7e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  37.44 
 
 
204 aa  121  9e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_007510  Bcep18194_A3526  multiple antibiotic resistance (MarC)-related proteins  30.5 
 
 
206 aa  121  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  0.303666  normal  0.286765 
 
 
-
 
NC_007969  Pcryo_0603  multiple antibiotic resistance (MarC)-related proteins  34 
 
 
201 aa  120  9.999999999999999e-27  Psychrobacter cryohalolentis K5  Bacteria  normal  0.708242  normal  0.450021 
 
 
-
 
NC_008009  Acid345_0603  multiple antibiotic resistance MarC-related protein  36.76 
 
 
216 aa  121  9.999999999999999e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  35.18 
 
 
207 aa  120  9.999999999999999e-27  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  33.83 
 
 
212 aa  120  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  36.5 
 
 
207 aa  120  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_010508  Bcenmc03_0407  multiple antibiotic resistance (MarC)-related protein  30 
 
 
206 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190902 
 
 
-
 
NC_007973  Rmet_3245  multiple antibiotic resistance (MarC)-related proteins  32.21 
 
 
207 aa  119  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  33.82 
 
 
213 aa  119  3e-26  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_011662  Tmz1t_0417  multiple antibiotic resistance (MarC)-related protein  30.85 
 
 
202 aa  119  3e-26  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27780  conserved hypothetical protein TIGR00427  40 
 
 
203 aa  119  3e-26  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.004251  normal  0.739929 
 
 
-
 
NC_009712  Mboo_0686  multiple antibiotic resistance (MarC)-related protein  34.03 
 
 
216 aa  119  3.9999999999999996e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.666037 
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  31.66 
 
 
216 aa  119  4.9999999999999996e-26  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010681  Bphyt_3557  multiple antibiotic resistance (MarC)-related protein  27.14 
 
 
206 aa  119  4.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.247513  hitchhiker  0.0000492857 
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  33.99 
 
 
235 aa  119  4.9999999999999996e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_012856  Rpic12D_2879  multiple antibiotic resistance (MarC)-related protein  33.33 
 
 
207 aa  119  4.9999999999999996e-26  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0513768 
 
 
-
 
NC_010551  BamMC406_0355  multiple antibiotic resistance (MarC)-related protein  30 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.458882 
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  33.83 
 
 
231 aa  118  6e-26  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0401  MarC family multiple antibiotic resistance protein  27.14 
 
 
206 aa  118  7.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0346  multiple antibiotic resistance (MarC)-related proteins  29.5 
 
 
206 aa  118  7.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.383588  n/a   
 
 
-
 
NC_009524  PsycPRwf_1961  multiple antibiotic resistance (MarC)-related protein  30.66 
 
 
213 aa  117  9.999999999999999e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2711  MarC membrane protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3242  MarC membrane protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3721  MarC membrane protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.596949  n/a   
 
 
-
 
NC_007434  BURPS1710b_3690  hypothetical protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.984937  n/a   
 
 
-
 
NC_008836  BMA10229_A1791  MarC membrane protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2762  MarC membrane protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2990  hypothetical protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia thailandensis E264  Bacteria  normal  0.792349  n/a   
 
 
-
 
NC_009074  BURPS668_3663  MarC membrane protein  31.34 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  34.03 
 
 
214 aa  117  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  33.64 
 
 
220 aa  116  1.9999999999999998e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_2756  multiple antibiotic resistance (MarC)-related protein  30.35 
 
 
206 aa  117  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_1406  multiple antibiotic resistance (MarC)-related protein  29.5 
 
 
213 aa  116  3e-25  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0686  multiple antibiotic resistance (MarC)-related protein  30 
 
 
213 aa  115  3.9999999999999997e-25  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1270  multiple antibiotic resistance (MarC)-related protein  31 
 
 
213 aa  115  3.9999999999999997e-25  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  34.54 
 
 
205 aa  115  3.9999999999999997e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3347  multiple drug resistance protein MarC  33.17 
 
 
217 aa  115  5e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.123982 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  35.68 
 
 
206 aa  115  6.9999999999999995e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1719  multiple antibiotic resistance (MarC)-related protein  38.78 
 
 
212 aa  114  8.999999999999998e-25  Acidiphilium cryptum JF-5  Bacteria  normal  0.111498  n/a   
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  35.9 
 
 
209 aa  114  8.999999999999998e-25  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  34.52 
 
 
209 aa  114  1.0000000000000001e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1098  hypothetical protein  35.38 
 
 
209 aa  114  2.0000000000000002e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  30.81 
 
 
212 aa  113  2.0000000000000002e-24  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  37.56 
 
 
211 aa  114  2.0000000000000002e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0238  multiple antibiotic resistance (MarC)-related proteins  33.66 
 
 
210 aa  112  3e-24  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2196  hypothetical protein  33.01 
 
 
214 aa  112  3e-24  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_009051  Memar_0717  multiple antibiotic resistance (MarC)-related protein  31.16 
 
 
217 aa  112  3e-24  Methanoculleus marisnigri JR1  Archaea  decreased coverage  0.000442646  n/a   
 
 
-
 
NC_009635  Maeo_1199  multiple antibiotic resistance (MarC)-related protein  30.73 
 
 
217 aa  112  4.0000000000000004e-24  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010524  Lcho_0187  multiple antibiotic resistance (MarC)-related protein  32.16 
 
 
213 aa  112  5e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0936  multiple antibiotic resistance (MarC)-related protein  31.4 
 
 
225 aa  112  5e-24  Opitutus terrae PB90-1  Bacteria  normal  0.19439  normal 
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  33.65 
 
 
209 aa  111  7.000000000000001e-24  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  35.26 
 
 
210 aa  111  7.000000000000001e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_008254  Meso_1399  multiple antibiotic resistance (MarC)-related proteins  37.57 
 
 
217 aa  110  1.0000000000000001e-23  Chelativorans sp. BNC1  Bacteria  normal  0.557326  n/a   
 
 
-
 
NC_008700  Sama_1694  hypothetical protein  33.65 
 
 
210 aa  111  1.0000000000000001e-23  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0657108 
 
 
-
 
NC_009438  Sputcn32_1812  hypothetical protein  32.66 
 
 
210 aa  110  2.0000000000000002e-23  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0450  multiple drug resistance protein MarC  29.76 
 
 
219 aa  110  2.0000000000000002e-23  Methylobacillus flagellatus KT  Bacteria  normal  0.0439205  normal  0.59514 
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  35.9 
 
 
209 aa  110  2.0000000000000002e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_004347  SO_2137  hypothetical protein  32.16 
 
 
210 aa  109  3e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008782  Ajs_0258  multiple antibiotic resistance (MarC)-related proteins  32.34 
 
 
212 aa  109  3e-23  Acidovorax sp. JS42  Bacteria  normal  normal  0.0133581 
 
 
-
 
NC_011992  Dtpsy_0253  multiple antibiotic resistance (MarC)-related protein  32.34 
 
 
212 aa  109  3e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.592133  n/a   
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  32.83 
 
 
215 aa  109  4.0000000000000004e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_009665  Shew185_1949  hypothetical protein  32.16 
 
 
210 aa  109  4.0000000000000004e-23  Shewanella baltica OS185  Bacteria  normal  0.0303133  n/a   
 
 
-
 
NC_009997  Sbal195_1956  hypothetical protein  32.16 
 
 
210 aa  109  4.0000000000000004e-23  Shewanella baltica OS195  Bacteria  normal  normal  0.466227 
 
 
-
 
NC_008752  Aave_0319  multiple antibiotic resistance (MarC)-related protein  31.84 
 
 
211 aa  108  4.0000000000000004e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1923  hypothetical protein  32.16 
 
 
210 aa  109  4.0000000000000004e-23  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2370  hypothetical protein  32.16 
 
 
210 aa  109  4.0000000000000004e-23  Shewanella baltica OS223  Bacteria  normal  0.0117247  normal  0.036415 
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  36.41 
 
 
208 aa  108  5e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_008825  Mpe_A3804  putative transmembrane protein  31.84 
 
 
239 aa  108  5e-23  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0273275 
 
 
-
 
NC_008321  Shewmr4_1684  hypothetical protein  31.16 
 
 
210 aa  108  7.000000000000001e-23  Shewanella sp. MR-4  Bacteria  normal  0.197685  normal  0.181239 
 
 
-
 
NC_008577  Shewana3_1789  hypothetical protein  31.16 
 
 
210 aa  108  7.000000000000001e-23  Shewanella sp. ANA-3  Bacteria  normal  0.153384  normal  0.0804929 
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  33.5 
 
 
211 aa  108  8.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  33.5 
 
 
211 aa  108  9.000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_009901  Spea_2045  hypothetical protein  32 
 
 
207 aa  108  9.000000000000001e-23  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00255531  n/a   
 
 
-
 
NC_009092  Shew_1911  hypothetical protein  30.35 
 
 
213 aa  107  1e-22  Shewanella loihica PV-4  Bacteria  normal  0.0139262  unclonable  0.00000197593 
 
 
-
 
NC_007908  Rfer_3813  multiple antibiotic resistance (MarC)-related proteins  31.47 
 
 
206 aa  107  1e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.0677256  n/a   
 
 
-
 
NC_007955  Mbur_0272  multiple antibiotic resistance (MarC)-related proteins  27.27 
 
 
214 aa  107  1e-22  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1759  hypothetical protein  31.16 
 
 
210 aa  107  1e-22  Shewanella sp. MR-7  Bacteria  normal  0.0131249  normal  0.465228 
 
 
-
 
NC_009457  VC0395_A1620  hypothetical protein  31 
 
 
212 aa  107  2e-22  Vibrio cholerae O395  Bacteria  normal  0.079521  n/a   
 
 
-
 
NC_007760  Adeh_2046  multiple antibiotic resistance (MarC)-related proteins  32.16 
 
 
211 aa  107  2e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  32.85 
 
 
209 aa  107  2e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
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