More than 300 homologs were found in PanDaTox collection
for query gene GYMC61_3444 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_3444  response regulator receiver protein  100 
 
 
120 aa  241  3e-63  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  90.83 
 
 
120 aa  222  1e-57  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  76.47 
 
 
122 aa  186  7e-47  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_003909  BCE_5466  stage 0 sporulation protein F  77.59 
 
 
122 aa  184  2e-46  Bacillus cereus ATCC 10987  Bacteria  normal  0.0750811  n/a   
 
 
-
 
NC_005945  BAS5185  stage 0 sporulation protein F  77.59 
 
 
122 aa  184  2e-46  Bacillus anthracis str. Sterne  Bacteria  normal  0.0413406  n/a   
 
 
-
 
NC_005957  BT9727_5020  stage 0 sporulation protein F  77.59 
 
 
122 aa  184  2e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000180816  n/a   
 
 
-
 
NC_006274  BCZK5036  stage 0 sporulation protein F  77.59 
 
 
122 aa  184  2e-46  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000486089  n/a   
 
 
-
 
NC_007530  GBAA_5581  stage 0 sporulation protein F  77.59 
 
 
122 aa  184  2e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0132264  n/a   
 
 
-
 
NC_011658  BCAH187_A5514  sporulation initiation phosphotransferase F  77.59 
 
 
122 aa  184  2e-46  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000170867  n/a   
 
 
-
 
NC_011725  BCB4264_A5459  sporulation initiation phosphotransferase F  77.59 
 
 
122 aa  184  2e-46  Bacillus cereus B4264  Bacteria  hitchhiker  0.000856307  n/a   
 
 
-
 
NC_011773  BCAH820_5429  sporulation initiation phosphotransferase F  77.59 
 
 
122 aa  184  2e-46  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.26925e-31 
 
 
-
 
NC_010184  BcerKBAB4_5134  response regulator receiver protein  78.26 
 
 
122 aa  184  3e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0135031  n/a   
 
 
-
 
NC_011772  BCG9842_B5493  sporulation initiation phosphotransferase F  76.72 
 
 
122 aa  182  1.0000000000000001e-45  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000162821  unclonable  2.17721e-26 
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  61.67 
 
 
125 aa  160  6e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_013216  Dtox_3740  response regulator receiver protein  45.22 
 
 
135 aa  112  2.0000000000000002e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.119956  normal 
 
 
-
 
NC_010424  Daud_2177  response regulator receiver protein  43.1 
 
 
120 aa  109  1.0000000000000001e-23  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  43.1 
 
 
456 aa  108  3e-23  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3178  response regulator receiver protein  44.35 
 
 
135 aa  105  2e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00591737  n/a   
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  42.86 
 
 
118 aa  104  4e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  41.18 
 
 
123 aa  103  1e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  41.38 
 
 
457 aa  100  6e-21  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  41.74 
 
 
456 aa  99.8  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  41.74 
 
 
456 aa  99.8  1e-20  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  39.66 
 
 
457 aa  99  2e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0055  response regulator receiver protein  46.09 
 
 
133 aa  98.6  3e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0166098  hitchhiker  0.000805427 
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  46.15 
 
 
122 aa  98.6  3e-20  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  40.52 
 
 
461 aa  97.4  6e-20  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  40.52 
 
 
461 aa  97.4  6e-20  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  40.52 
 
 
461 aa  97.1  7e-20  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  40.52 
 
 
461 aa  97.1  7e-20  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  40.52 
 
 
461 aa  97.1  7e-20  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  40.52 
 
 
461 aa  97.1  7e-20  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_013216  Dtox_1973  response regulator receiver protein  41.23 
 
 
127 aa  97.1  8e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00115006  hitchhiker  0.0000141072 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  40.87 
 
 
508 aa  96.7  9e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_013223  Dret_0868  multi-sensor signal transduction histidine kinase  41.23 
 
 
650 aa  96.3  1e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  39.66 
 
 
685 aa  95.5  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  38.6 
 
 
462 aa  95.5  2e-19  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  37.93 
 
 
454 aa  95.9  2e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  41.03 
 
 
516 aa  94.4  5e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1426  two component, sigma54 specific, transcriptional regulator, Fis family  43.86 
 
 
444 aa  94  6e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  38.33 
 
 
456 aa  93.6  8e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  41.18 
 
 
458 aa  93.2  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2017  response regulator CheY  39.66 
 
 
129 aa  92.8  1e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
453 aa  92.8  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  40.34 
 
 
239 aa  92.8  1e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_008009  Acid345_2782  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
463 aa  92.8  1e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.795323  normal 
 
 
-
 
NC_007644  Moth_2406  response regulator receiver domain-containing protein  39.64 
 
 
124 aa  92.4  2e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
453 aa  92.4  2e-18  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  40.52 
 
 
452 aa  91.7  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  42.86 
 
 
465 aa  92  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2891  response regulator receiver protein  38.32 
 
 
135 aa  91.7  3e-18  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00486665  n/a   
 
 
-
 
NC_010001  Cphy_2701  response regulator receiver protein  39.5 
 
 
120 aa  92  3e-18  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000335112  n/a   
 
 
-
 
NC_012918  GM21_2828  two component, sigma54 specific, transcriptional regulator, Fis family  42.11 
 
 
444 aa  91.7  3e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  40.68 
 
 
451 aa  92  3e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  40.34 
 
 
458 aa  91.7  3e-18  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  37.39 
 
 
448 aa  91.7  3e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  39.83 
 
 
347 aa  90.9  5e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  39.83 
 
 
347 aa  90.9  5e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
454 aa  90.9  5e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  38.26 
 
 
1139 aa  90.9  5e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  39.83 
 
 
454 aa  90.5  6e-18  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
462 aa  90.5  6e-18  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  38.74 
 
 
458 aa  90.5  7e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  39.32 
 
 
476 aa  90.5  7e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2159  response regulator receiver protein  37.82 
 
 
120 aa  90.1  9e-18  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00200925  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  37.72 
 
 
688 aa  90.1  9e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  39.82 
 
 
124 aa  89.7  1e-17  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
458 aa  89  2e-17  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  36.75 
 
 
486 aa  89.4  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  36.21 
 
 
653 aa  89  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0751  two component, sigma54 specific, Fis family transcriptional regulator  43.59 
 
 
485 aa  88.6  2e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0880271  normal 
 
 
-
 
NC_008554  Sfum_1488  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 
464 aa  89  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.781886  normal  0.688737 
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  34.48 
 
 
464 aa  88.6  3e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2658  two component, sigma54 specific, transcriptional regulator, Fis family  41.96 
 
 
458 aa  88.6  3e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  38.79 
 
 
459 aa  87.8  4e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
461 aa  87.8  4e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  34.48 
 
 
463 aa  87.8  4e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  35.9 
 
 
131 aa  87.8  5e-17  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  35.09 
 
 
466 aa  87.8  5e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_0539  multi-sensor hybrid histidine kinase  35.45 
 
 
816 aa  87.4  6e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.146269  normal 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  38.26 
 
 
457 aa  87.4  6e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1577  two component, sigma54 specific, transcriptional regulator, Fis family  42.86 
 
 
458 aa  87.4  6e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_5543  two component transcriptional regulator, Fis family  37.17 
 
 
180 aa  87  7e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.657887  normal 
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  34.48 
 
 
464 aa  87  8e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_009972  Haur_4547  multi-sensor hybrid histidine kinase  37.27 
 
 
973 aa  87  8e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  38.05 
 
 
460 aa  87  8e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  38.05 
 
 
461 aa  86.7  9e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2054  response regulator receiver protein  40 
 
 
140 aa  86.7  9e-17  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0880044 
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  39.62 
 
 
123 aa  86.7  9e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  37.93 
 
 
455 aa  86.7  1e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_009767  Rcas_0846  response regulator receiver protein  35.29 
 
 
139 aa  86.7  1e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00282438 
 
 
-
 
NC_013205  Aaci_1404  response regulator receiver protein  37.82 
 
 
119 aa  86.7  1e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  36.84 
 
 
455 aa  86.7  1e-16  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_010814  Glov_1826  two component, sigma54 specific, transcriptional regulator, Fis family  40.54 
 
 
455 aa  86.7  1e-16  Geobacter lovleyi SZ  Bacteria  normal  0.048867  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  41.9 
 
 
485 aa  86.7  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0838  two component, sigma54 specific, Fis family transcriptional regulator  41.59 
 
 
457 aa  86.3  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1847  two component, sigma54 specific, Fis family transcriptional regulator  37.29 
 
 
459 aa  86.7  1e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.122843  normal  0.436579 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  35.59 
 
 
480 aa  86.7  1e-16  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
472 aa  86.3  1e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  38.79 
 
 
454 aa  86.3  1e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
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