More than 300 homologs were found in PanDaTox collection
for query gene GSU0686 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011059  Paes_1686  1-deoxy-D-xylulose-5-phosphate synthase  52.26 
 
 		 659 aa  637    Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_4130  1-deoxy-D-xylulose-5-phosphate synthase  52.9 
 
 		 632 aa  641    Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000139923  normal  1 
 
 
-
 
NC_002936  DET0745  1-deoxy-D-xylulose-5-phosphate synthase  51.11 
 
 		 647 aa  649    Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  100 
 
 		 637 aa  1293    Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_002939  GSU1764  1-deoxy-D-xylulose-5-phosphate synthase  64.34 
 
 		 626 aa  817    Geobacter sulfurreducens PCA  Bacteria  normal  0.0479282  n/a   
 
 
-
 
NC_010682  Rpic_2426  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 		 636 aa  637    Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1157  deoxyxylulose-5-phosphate synthase  55.12 
 
 		 636 aa  670    Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_3362  1-deoxy-D-xylulose-5-phosphate synthase  70.02 
 
 		 635 aa  930    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0817  1-deoxy-D-xylulose-5-phosphate synthase  53.99 
 
 		 639 aa  656    Methylococcus capsulatus str. Bath  Bacteria  normal  0.64849  n/a   
 
 
-
 
NC_011898  Ccel_1900  deoxyxylulose-5-phosphate synthase  51.3 
 
 		 623 aa  639    Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00488607  n/a   
 
 
-
 
NC_003909  BCE_4249  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 		 630 aa  661    Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000543695  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0652  1-deoxy-D-xylulose-5-phosphate synthase  49.84 
 
 		 631 aa  637    Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_1501  1-deoxy-D-xylulose-5-phosphate synthase  52.56 
 
 		 636 aa  648    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_06530  deoxyxylulose-5-phosphate synthase  56.59 
 
 		 636 aa  754    Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000553997  n/a   
 
 
-
 
NC_011725  BCB4264_A4287  1-deoxy-D-xylulose-5-phosphate synthase  50.8 
 
 		 630 aa  662    Bacillus cereus B4264  Bacteria  unclonable  0.000332787  n/a   
 
 
-
 
NC_009485  BBta_2479  1-deoxy-D-xylulose-5-phosphate synthase  52.51 
 
 		 641 aa  645    Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_005945  BAS4081  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 		 630 aa  660    Bacillus anthracis str. Sterne  Bacteria  normal  0.491332  n/a   
 
 
-
 
NC_005957  BT9727_3919  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 		 630 aa  660    Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000000317792  n/a   
 
 
-
 
NC_006274  BCZK3930  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 		 630 aa  660    Bacillus cereus E33L  Bacteria  normal  0.0146607  n/a   
 
 
-
 
NC_011661  Dtur_1044  deoxyxylulose-5-phosphate synthase  51.95 
 
 		 618 aa  642    Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.213907  n/a   
 
 
-
 
NC_009675  Anae109_1136  deoxyxylulose-5-phosphate synthase  54.75 
 
 		 635 aa  679    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  hitchhiker  0.00423359 
 
 
-
 
NC_010552  BamMC406_3776  1-deoxy-D-xylulose-5-phosphate synthase  51.74 
 
 		 634 aa  639    Burkholderia ambifaria MC40-6  Bacteria  normal  0.495759  normal  0.0534173 
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  52.58 
 
 		 618 aa  654    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_008752  Aave_2015  1-deoxy-D-xylulose-5-phosphate synthase  51.78 
 
 		 622 aa  638    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0928222  hitchhiker  0.00382162 
 
 
-
 
NC_009012  Cthe_0828  1-deoxy-D-xylulose-5-phosphate synthase  54.65 
 
 		 627 aa  674    Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_0879  1-deoxy-D-xylulose-5-phosphate synthase  55.29 
 
 		 618 aa  654    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.623076 
 
 
-
 
NC_007406  Nwi_0633  1-deoxy-D-xylulose-5-phosphate synthase  52.58 
 
 		 666 aa  635    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.300424  normal  1 
 
 
-
 
NC_011883  Ddes_0956  1-deoxy-D-xylulose-5-phosphate synthase  55.65 
 
 		 644 aa  679    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.246357  n/a   
 
 
-
 
NC_011891  A2cp1_1225  deoxyxylulose-5-phosphate synthase  55.28 
 
 		 636 aa  670    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  51.36 
 
 		 640 aa  639    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0675  1-deoxy-D-xylulose-5-phosphate synthase  51.21 
 
 		 633 aa  645    Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_0443  1-deoxy-D-xylulose-5-phosphate synthase  53.07 
 
 		 643 aa  635    Brucella ovis ATCC 25840  Bacteria  normal  0.580074  n/a   
 
 
-
 
NC_010814  Glov_2235  1-deoxy-D-xylulose-5-phosphate synthase  72.74 
 
 		 622 aa  939    Geobacter lovleyi SZ  Bacteria  normal  0.77755  n/a   
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  61.67 
 
 		 634 aa  798    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_007511  Bcep18194_B2211  1-deoxy-D-xylulose-5-phosphate synthase  51.51 
 
 		 634 aa  637    Burkholderia sp. 383  Bacteria  normal  0.41875  normal  1 
 
 
-
 
NC_010524  Lcho_3373  deoxyxylulose-5-phosphate synthase  51.66 
 
 		 639 aa  638    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011769  DvMF_0126  1-deoxy-D-xylulose-5-phosphate synthase  57.07 
 
 		 646 aa  729    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.410155 
 
 
-
 
NC_011146  Gbem_1258  1-deoxy-D-xylulose-5-phosphate synthase  64.61 
 
 		 646 aa  809    Geobacter bemidjiensis Bem  Bacteria  normal  0.260207  n/a   
 
 
-
 
NC_007517  Gmet_1934  1-deoxy-D-xylulose-5-phosphate synthase  64.53 
 
 		 625 aa  833    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  81.63 
 
 		 635 aa  1075    Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_007519  Dde_2200  1-deoxy-D-xylulose-5-phosphate synthase  57.67 
 
 		 661 aa  731    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4400  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 		 630 aa  660    Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000595966  n/a   
 
 
-
 
NC_012856  Rpic12D_2033  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 		 636 aa  637    Ralstonia pickettii 12D  Bacteria  normal  0.720268  normal  1 
 
 
-
 
NC_011726  PCC8801_0471  1-deoxy-D-xylulose-5-phosphate synthase  53.56 
 
 		 636 aa  635    Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_1030  1-deoxy-D-xylulose-5-phosphate synthase  52.04 
 
 		 621 aa  638    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  52.65 
 
 		 614 aa  654    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_010814  Glov_2182  1-deoxy-D-xylulose-5-phosphate synthase  62.98 
 
 		 625 aa  826    Geobacter lovleyi SZ  Bacteria  normal  0.0455646  n/a   
 
 
-
 
NC_011773  BCAH820_4197  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 		 630 aa  660    Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.9666000000000002e-33 
 
 
-
 
NC_007644  Moth_1511  1-deoxy-D-xylulose-5-phosphate synthase  59.81 
 
 		 640 aa  729    Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B0947  1-deoxy-D-xylulose-5-phosphate synthase  50.8 
 
 		 630 aa  661    Bacillus cereus G9842  Bacteria  decreased coverage  0.0000059556  decreased coverage  0.0000085811 
 
 
-
 
NC_007760  Adeh_1097  1-deoxy-D-xylulose-5-phosphate synthase  55.75 
 
 		 636 aa  685    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.124796  n/a   
 
 
-
 
NC_010623  Bphy_3948  1-deoxy-D-xylulose-5-phosphate synthase  51.52 
 
 		 632 aa  637    Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_4733  1-deoxy-D-xylulose-5-phosphate synthase  53.03 
 
 		 643 aa  635    Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_1694  1-Deoxy-D-xylulose-5-phosphate synthase  56.95 
 
 		 631 aa  723    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.134316  normal  0.0277937 
 
 
-
 
NC_011206  Lferr_1642  deoxyxylulose-5-phosphate synthase  53.32 
 
 		 624 aa  650    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  hitchhiker  0.0000759377 
 
 
-
 
NC_007908  Rfer_2875  1-deoxy-D-xylulose-5-phosphate synthase  51.92 
 
 		 632 aa  639    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  52.92 
 
 		 631 aa  642    Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal  1 
 
 
-
 
NC_011901  Tgr7_0832  1-deoxy-D-xylulose-5-phosphate synthase  53.71 
 
 		 640 aa  660    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.111285  n/a   
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  53.93 
 
 		 614 aa  676    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal  1 
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  51.86 
 
 		 635 aa  651    Polaromonas sp. JS666  Bacteria  normal  1  normal  0.123274 
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  52.7 
 
 		 635 aa  644    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3648  1-deoxy-D-xylulose-5-phosphate synthase  52.06 
 
 		 634 aa  644    Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_2511  deoxyxylulose-5-phosphate synthase  53.25 
 
 		 625 aa  659    Clostridium phytofermentans ISDg  Bacteria  normal  0.465086  n/a   
 
 
-
 
NC_010086  Bmul_4820  1-deoxy-D-xylulose-5-phosphate synthase  51.82 
 
 		 646 aa  636    Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_0956  1-deoxy-D-xylulose-5-phosphate synthase  52.07 
 
 		 629 aa  647    Acidovorax ebreus TPSY  Bacteria  normal  0.922207  n/a   
 
 
-
 
NC_012791  Vapar_1571  1-deoxy-D-xylulose-5-phosphate synthase  51.27 
 
 		 632 aa  635    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_2615  1-deoxy-D-xylulose-5-phosphate synthase  52.41 
 
 		 637 aa  651    Cupriavidus metallidurans CH34  Bacteria  normal  0.0207867  normal  0.922526 
 
 
-
 
NC_011761  AFE_1974  1-deoxy-D-xylulose-5-phosphate synthase  53.32 
 
 		 624 aa  650    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1027  deoxyxylulose-5-phosphate synthase  61.97 
 
 		 634 aa  780    Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6781  1-deoxy-D-xylulose-5-phosphate synthase  52.37 
 
 		 653 aa  645    Burkholderia phytofirmans PsJN  Bacteria  normal  0.772471  hitchhiker  0.0000939262 
 
 
-
 
NC_012793  GWCH70_2319  1-deoxy-D-xylulose-5-phosphate synthase  53.78 
 
 		 630 aa  690    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4486  1-deoxy-D-xylulose-5-phosphate synthase  52.06 
 
 		 646 aa  644    Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  61.3 
 
 		 635 aa  802    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  54.85 
 
 		 650 aa  664    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3488  deoxyxylulose-5-phosphate synthase  57.54 
 
 		 631 aa  723    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0451312  n/a   
 
 
-
 
NC_012880  Dd703_2894  1-deoxy-D-xylulose-5-phosphate synthase  51.29 
 
 		 623 aa  635    Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4029  1-deoxy-D-xylulose-5-phosphate synthase  50.32 
 
 		 630 aa  659    Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000105298  n/a   
 
 
-
 
NC_011658  BCAH187_A4307  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 		 630 aa  661    Bacillus cereus AH187  Bacteria  unclonable  0.0000000950231  n/a   
 
 
-
 
NC_011662  Tmz1t_1774  1-deoxy-D-xylulose-5-phosphate synthase  54.05 
 
 		 622 aa  657    Thauera sp. MZ1T  Bacteria  normal  0.0951101  n/a   
 
 
-
 
NC_009674  Bcer98_2870  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 		 630 aa  660    Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.016121  n/a   
 
 
-
 
NC_009667  Oant_0547  1-deoxy-D-xylulose-5-phosphate synthase  52.22 
 
 		 638 aa  647    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1381  1-deoxy-D-xylulose-5-phosphate synthase  52.5 
 
 		 628 aa  638    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.604583  normal  0.510709 
 
 
-
 
NC_010320  Teth514_1540  1-deoxy-D-xylulose-5-phosphate synthase  54.16 
 
 		 620 aa  691    Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00810208  n/a   
 
 
-
 
NC_008346  Swol_0582  deoxyxylulose-5-phosphate synthase  55.28 
 
 		 638 aa  698    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_0849  1-deoxy-D-xylulose-5-phosphate synthase  52.59 
 
 		 643 aa  637    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.313067 
 
 
-
 
NC_008391  Bamb_3250  1-deoxy-D-xylulose-5-phosphate synthase  51.74 
 
 		 646 aa  640    Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0235548 
 
 
-
 
NC_009719  Plav_0781  1-deoxy-D-xylulose-5-phosphate synthase  53.88 
 
 		 650 aa  651    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.128474  normal  0.356919 
 
 
-
 
NC_008543  Bcen2424_3879  1-deoxy-D-xylulose-5-phosphate synthase  52.06 
 
 		 646 aa  644    Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.155835 
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  62.94 
 
 		 646 aa  815    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 622 aa  685    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_3112  1-deoxy-D-xylulose-5-phosphate synthase  50.81 
 
 		 619 aa  638    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1288  deoxyxylulose-5-phosphate synthase  51.56 
 
 		 616 aa  640    Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0593022  n/a   
 
 
-
 
NC_008609  Ppro_1191  1-deoxy-D-xylulose-5-phosphate synthase  71.75 
 
 		 624 aa  898    Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2403  1-deoxy-D-xylulose-5-phosphate synthase  62.64 
 
 		 626 aa  804    Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3253  1-deoxy-D-xylulose-5-phosphate synthase  50.81 
 
 		 619 aa  638    Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1662  deoxyxylulose-5-phosphate synthase  60.26 
 
 		 626 aa  775    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.184143  n/a   
 
 
-
 
NC_009483  Gura_2175  1-deoxy-D-xylulose-5-phosphate synthase  65.75 
 
 		 620 aa  841    Geobacter uraniireducens Rf4  Bacteria  normal  0.0116264  n/a   
 
 
-
 
NC_009483  Gura_1018  1-deoxy-D-xylulose-5-phosphate synthase  76.08 
 
 		 637 aa  973    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0883  1-deoxy-D-xylulose-5-phosphate synthase  70.17 
 
 		 635 aa  937    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000207097 
 
 
-
 
NC_008751  Dvul_1718  1-deoxy-D-xylulose-5-phosphate synthase  55.73 
 
 		 641 aa  702    Desulfovibrio vulgaris DP4  Bacteria  normal  0.0789997  normal  0.8348 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>