84 homologs were found in PanDaTox collection
for query gene GM21_1749 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1749  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
147 aa  306  6.999999999999999e-83  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  97.96 
 
 
147 aa  300  5.000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  0.0214018  n/a   
 
 
-
 
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
147 aa  70.1  0.000000000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  32.06 
 
 
159 aa  62.8  0.000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.22 
 
 
151 aa  58.9  0.00000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_009049  Rsph17029_0150  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.19 
 
 
180 aa  58.5  0.00000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.460194 
 
 
-
 
NC_010803  Clim_1839  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.93 
 
 
140 aa  57.8  0.00000005  Chlorobium limicola DSM 245  Bacteria  normal  0.481374  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  28.79 
 
 
159 aa  57.4  0.00000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  28.79 
 
 
159 aa  57.4  0.00000007  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  25.53 
 
 
160 aa  57  0.00000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.08 
 
 
147 aa  55.8  0.0000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  23.08 
 
 
160 aa  55.1  0.0000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  24.11 
 
 
160 aa  55.5  0.0000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_008044  TM1040_0065  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.07 
 
 
146 aa  54.7  0.0000004  Ruegeria sp. TM1040  Bacteria  normal  0.459983  normal 
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  25 
 
 
160 aa  54.3  0.0000005  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  23.08 
 
 
160 aa  54.3  0.0000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  23.08 
 
 
160 aa  54.3  0.0000005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1500  anti-sigma regulatory kinase  29.36 
 
 
180 aa  54.3  0.0000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  24.82 
 
 
160 aa  54.3  0.0000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4563  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.13 
 
 
286 aa  53.9  0.0000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  24.82 
 
 
160 aa  53.9  0.0000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  24.82 
 
 
160 aa  53.9  0.0000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  24.82 
 
 
160 aa  53.9  0.0000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.47 
 
 
144 aa  53.1  0.000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_011313  VSAL_II0326  hypothetical protein  27.2 
 
 
146 aa  53.1  0.000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.19 
 
 
139 aa  52.4  0.000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  27.78 
 
 
162 aa  52.8  0.000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008639  Cpha266_1826  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.93 
 
 
147 aa  52  0.000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.53 
 
 
144 aa  50.8  0.000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.78 
 
 
141 aa  50.4  0.000007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.78 
 
 
141 aa  50.4  0.000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0119  anti-sigma F factor  29.52 
 
 
149 aa  50.1  0.00001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  24.82 
 
 
133 aa  50.1  0.00001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_007802  Jann_4052  putative anti-sigma regulatory factor (serine/threonine protein kinase)  26.8 
 
 
170 aa  49.7  0.00001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2555  anti-sigma-factor antagonist  26.09 
 
 
249 aa  49.7  0.00001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  32.31 
 
 
142 aa  49.3  0.00002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2161  anti-sigma-factor antagonist  24.11 
 
 
250 aa  48.9  0.00002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.64 
 
 
142 aa  49.3  0.00002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_011060  Ppha_1014  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.64 
 
 
147 aa  46.2  0.0001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000121242  n/a   
 
 
-
 
NC_009428  Rsph17025_2905  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.37 
 
 
149 aa  46.2  0.0001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.94653  normal  0.27326 
 
 
-
 
NC_013889  TK90_1874  putative anti-sigma regulatory factor, serine/threonine protein kinase  23.08 
 
 
137 aa  46.6  0.0001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.122382  normal 
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.67 
 
 
134 aa  46.2  0.0001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_008686  Pden_0819  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.23 
 
 
185 aa  46.2  0.0002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1666  sensor histidine kinase  22.76 
 
 
142 aa  45.8  0.0002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1875  anti-sigma regulatory factor  29.13 
 
 
139 aa  45.4  0.0002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000201046  n/a   
 
 
-
 
NC_007512  Plut_1367  putative anti-sigma regulatory factor (serine/threonine protein kinase)  28.16 
 
 
145 aa  45.4  0.0002  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.646925 
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  28.12 
 
 
146 aa  45.8  0.0002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_013457  VEA_000008  putative anti-sigma F factor antagonist  27.68 
 
 
165 aa  45.8  0.0002  Vibrio sp. Ex25  Bacteria  normal  0.232541  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.73 
 
 
151 aa  45.1  0.0003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_013203  Apar_0915  anti-sigma-factor antagonist  31.68 
 
 
243 aa  45.1  0.0003  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.583996 
 
 
-
 
NC_007514  Cag_0611  putative anti-sigma regulatory factor (serine/threonine protein kinase)  31.03 
 
 
136 aa  45.1  0.0003  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.0000000221562  n/a   
 
 
-
 
NC_009901  Spea_0299  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
147 aa  45.1  0.0003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  29.9 
 
 
141 aa  45.4  0.0003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0194  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.49 
 
 
136 aa  44.3  0.0005  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0072  serine-protein kinase  28.44 
 
 
169 aa  44.7  0.0005  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00642578 
 
 
-
 
NC_010717  PXO_03913  hypothetical protein  29.52 
 
 
143 aa  44.3  0.0006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1160  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.9 
 
 
138 aa  43.9  0.0007  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.620968  normal 
 
 
-
 
NC_009486  Tpet_0196  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.27 
 
 
136 aa  43.9  0.0008  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2838  putative anti-sigma regulatory factor serine/threonine protein kinase  28.43 
 
 
147 aa  43.1  0.001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2553  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
324 aa  42.7  0.001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.27 
 
 
158 aa  43.1  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1745  anti-sigma regulatory factor, serine/threonine protein kinase  30.43 
 
 
153 aa  43.5  0.001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_07010  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.4 
 
 
143 aa  43.1  0.001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  27.43 
 
 
148 aa  43.1  0.001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.72 
 
 
143 aa  43.1  0.001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0773  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.57 
 
 
140 aa  42.7  0.002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  27.84 
 
 
142 aa  42.4  0.002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1104  anti-sigma F factor  24.37 
 
 
148 aa  42.7  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.860331  n/a   
 
 
-
 
NC_012793  GWCH70_2251  anti-sigma F factor  30.28 
 
 
146 aa  42.7  0.002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2065  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
143 aa  42.7  0.002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2285  anti-sigma F factor  32.71 
 
 
141 aa  42.4  0.002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1924  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.68 
 
 
492 aa  42.4  0.002  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.184744 
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  29 
 
 
143 aa  41.2  0.005  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.24 
 
 
154 aa  41.2  0.005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3289  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.25 
 
 
147 aa  41.2  0.005  Roseiflexus sp. RS-1  Bacteria  normal  0.0615968  normal 
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  26.8 
 
 
144 aa  41.2  0.005  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_008262  CPR_2021  anti-sigma F factor  31 
 
 
140 aa  40.8  0.006  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  31.58 
 
 
148 aa  40.8  0.006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.22 
 
 
154 aa  40.8  0.007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_008261  CPF_2306  anti-sigma F factor  31 
 
 
140 aa  40.8  0.007  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05599  response regulator receiver  26.12 
 
 
560 aa  40.4  0.008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_1722  putative anti-sigma regulatory factor (serine/threonine protein kinase)  29.55 
 
 
118 aa  40.4  0.008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0271292  n/a   
 
 
-
 
NC_009511  Swit_1493  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.24 
 
 
132 aa  40.4  0.009  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3187  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.21 
 
 
140 aa  40  0.009  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00310168  n/a   
 
 
-
 
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