20 homologs were found in PanDaTox collection
for query gene GM21_1063 on replicon NC_012918
Organism: Geobacter sp. M21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU3259  cytochrome c family protein  70.22 
 
 
507 aa  785    Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00302296  n/a   
 
 
-
 
NC_007517  Gmet_3174  cytochrome c family protein  70.89 
 
 
504 aa  792    Geobacter metallireducens GS-15  Bacteria  unclonable  0.000000000000139741  normal  0.372287 
 
 
-
 
NC_012918  GM21_1063  hypothetical protein  100 
 
 
507 aa  1059    Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.27837e-22 
 
 
-
 
NC_011146  Gbem_3199  hypothetical protein  95.66 
 
 
507 aa  1022    Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00139796  n/a   
 
 
-
 
NC_009483  Gura_0861  hypothetical protein  76.33 
 
 
507 aa  834    Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.0000162424  n/a   
 
 
-
 
NC_008009  Acid345_2712  cytochrome c family protein  47.35 
 
 
501 aa  501  1e-141  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.627653  normal 
 
 
-
 
NC_011891  A2cp1_2287  cytochrome c family protein  40.57 
 
 
468 aa  341  2e-92  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2199  cytochrome c family protein  40.96 
 
 
468 aa  336  5.999999999999999e-91  Anaeromyxobacter sp. K  Bacteria  normal  0.0994812  n/a   
 
 
-
 
NC_010571  Oter_2584  cytochrome c family protein  37.14 
 
 
496 aa  336  7e-91  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0452  cytochrome c family protein  37.07 
 
 
478 aa  322  9.999999999999999e-87  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.395423  normal  0.353435 
 
 
-
 
NC_007760  Adeh_1659  cytochrome c family protein  40.35 
 
 
468 aa  319  7e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.228643  n/a   
 
 
-
 
NC_009483  Gura_0664  hypothetical protein  35.23 
 
 
154 aa  52.4  0.00002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0192323  n/a   
 
 
-
 
NC_008607  Ppro_3707  cytochrome c nitrite reductase, small subunit NrfH, putative  34.09 
 
 
152 aa  52.4  0.00002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.741906  n/a   
 
 
-
 
NC_002939  GSU3155  cytochrome c nitrite reductase, small subunit NrfH, putative  34.44 
 
 
134 aa  48.1  0.0004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2386  cytochrome c nitrite reductase small subunit  33.67 
 
 
158 aa  46.2  0.001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_1043  cytochrome c nitrate reductase, small subunit  27.97 
 
 
161 aa  45.4  0.002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00711927  n/a   
 
 
-
 
NC_011830  Dhaf_4235  cytochrome c nitrate reductase, small subunit  27.19 
 
 
161 aa  45.8  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0706  cytochrome c nitrate reductase, small subunit  28.18 
 
 
177 aa  45.4  0.002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000199981  n/a   
 
 
-
 
NC_008554  Sfum_2399  cytochrome c nitrite reductase, small subunit NrfH, putative  32.95 
 
 
153 aa  45.4  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.524559  normal 
 
 
-
 
NC_013162  Coch_1100  cytochrome c nitrate reductase, small subunit  28.36 
 
 
205 aa  44.3  0.005  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>