14 homologs were found in PanDaTox collection
for query gene GM21_0082 on replicon NC_012918
Organism: Geobacter sp. M21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_0082  hypothetical protein  100 
 
 
71 aa  145  2.0000000000000003e-34  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.88298e-20 
 
 
-
 
NC_011146  Gbem_0100  hypothetical protein  98.59 
 
 
71 aa  144  5e-34  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000965946  n/a   
 
 
-
 
NC_002939  GSU2778  hypothetical protein  73.33 
 
 
61 aa  97.4  5e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0140  hypothetical protein  72.41 
 
 
61 aa  91.3  5e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2215  hypothetical protein  72.41 
 
 
59 aa  90.1  9e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000652261 
 
 
-
 
NC_011146  Gbem_2007  hypothetical protein  72.41 
 
 
59 aa  89.4  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.572608  n/a   
 
 
-
 
NC_010814  Glov_0139  transcriptional regulator, MerR family  38.71 
 
 
183 aa  53.1  0.000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2794  MerR family transcriptional regulator  45.28 
 
 
181 aa  50.4  0.000008  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2008  transcriptional regulator, MerR family  43.33 
 
 
191 aa  50.1  0.00001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2214  transcriptional regulator, MerR family  42.37 
 
 
177 aa  50.1  0.00001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000011193 
 
 
-
 
NC_008009  Acid345_0264  MerR family transcriptional regulator  31.58 
 
 
173 aa  48.1  0.00004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.829201  normal 
 
 
-
 
NC_008609  Ppro_1393  hypothetical protein  55.26 
 
 
38 aa  48.1  0.00004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2779  MerR family transcriptional regulator  38.33 
 
 
185 aa  45.1  0.0004  Geobacter sulfurreducens PCA  Bacteria  normal  0.0575166  n/a   
 
 
-
 
NC_008609  Ppro_1394  MerR family transcriptional regulator  36.67 
 
 
188 aa  43.9  0.0008  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>