19 homologs were found in PanDaTox collection
for query gene GM21_0044 on replicon NC_012918
Organism: Geobacter sp. M21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_0044  caa(3)-type oxidase, subunit IV  100 
 
 
95 aa  188  2e-47  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000561945 
 
 
-
 
NC_011146  Gbem_0045  caa(3)-type oxidase, subunit IV  81.52 
 
 
93 aa  152  2e-36  Geobacter bemidjiensis Bem  Bacteria  normal  0.602814  n/a   
 
 
-
 
NC_002939  GSU0221  cytochrome c oxidase, subunit IV  61.46 
 
 
96 aa  98.2  3e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.719636  n/a   
 
 
-
 
NC_007517  Gmet_0251  Caa(3)-type oxidase, subunit IV  57.61 
 
 
98 aa  96.3  1e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.138243  normal  0.0191554 
 
 
-
 
NC_007498  Pcar_2528  caa3-type cytochrome c oxidase, subunit IV  53.26 
 
 
94 aa  94  6e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0456558  n/a   
 
 
-
 
NC_013173  Dbac_1539  caa(3)-type oxidase, subunit IV  51.61 
 
 
98 aa  83.2  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1825  Caa(3)-type oxidase, subunit IV  45.26 
 
 
94 aa  77.4  0.00000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.183127  n/a   
 
 
-
 
NC_011769  DvMF_0534  caa(3)-type oxidase, subunit IV  45.74 
 
 
96 aa  74.3  0.0000000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.15954 
 
 
-
 
NC_008751  Dvul_1347  caa(3)-type oxidase, subunit IV  44.33 
 
 
97 aa  71.2  0.000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0635271  normal 
 
 
-
 
NC_011891  A2cp1_1679  caa(3)-type oxidase, subunit IV  43.96 
 
 
129 aa  58.9  0.00000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1603  caa(3)-type oxidase, subunit IV  44.71 
 
 
129 aa  58.5  0.00000003  Anaeromyxobacter sp. K  Bacteria  normal  0.0480986  n/a   
 
 
-
 
NC_007760  Adeh_2272  Caa(3)-type oxidase, subunit IV  42.86 
 
 
129 aa  58.2  0.00000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.205839  n/a   
 
 
-
 
NC_013501  Rmar_0232  caa(3)-type oxidase, subunit IV  34.41 
 
 
122 aa  53.5  0.0000008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.303369  n/a   
 
 
-
 
NC_013440  Hoch_2422  caa(3)-type oxidase, subunit IV  37.36 
 
 
129 aa  52.4  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.510357  normal  0.570824 
 
 
-
 
NC_011145  AnaeK_0854  caa(3)-type oxidase, subunit IV  36.84 
 
 
130 aa  49.7  0.00001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0858  caa(3)-type oxidase, subunit IV  36.84 
 
 
130 aa  49.7  0.00001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0806  Caa(3)-type oxidase, subunit IV  40 
 
 
131 aa  50.1  0.00001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_3992  caa(3)-type oxidase, subunit IV  34.48 
 
 
146 aa  49.3  0.00002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.768138  n/a   
 
 
-
 
NC_008009  Acid345_2993  Caa(3)-type oxidase, subunit IV  36.99 
 
 
105 aa  45.8  0.0002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.531137  normal  0.145245 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>