More than 300 homologs were found in PanDaTox collection
for query gene Franean1_7161 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  100 
 
 
225 aa  438  1e-122  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  57.21 
 
 
224 aa  246  2e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.87 
 
 
226 aa  235  4e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  60.27 
 
 
221 aa  234  1e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  57.01 
 
 
218 aa  231  5e-60  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.05 
 
 
228 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  56.22 
 
 
224 aa  229  3e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  56.68 
 
 
221 aa  227  9e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  57.34 
 
 
222 aa  227  1e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  54.46 
 
 
227 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.28 
 
 
226 aa  226  3e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  55.5 
 
 
218 aa  225  4e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  54.63 
 
 
226 aa  225  4e-58  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  55 
 
 
241 aa  225  4e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  56.68 
 
 
217 aa  225  5e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  55.66 
 
 
224 aa  224  6e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  55.91 
 
 
222 aa  224  6e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  56.33 
 
 
227 aa  224  8e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.34 
 
 
239 aa  223  2e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  55.05 
 
 
224 aa  221  5e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  55.71 
 
 
221 aa  221  5e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.34 
 
 
225 aa  221  7e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.54 
 
 
229 aa  221  8e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.21 
 
 
220 aa  219  2e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  56.22 
 
 
225 aa  220  2e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55.96 
 
 
216 aa  219  2e-56  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  55.13 
 
 
235 aa  219  2e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  56.94 
 
 
220 aa  220  2e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.88 
 
 
241 aa  219  3e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  56.22 
 
 
220 aa  218  5e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  53.51 
 
 
228 aa  217  9e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  53.02 
 
 
224 aa  217  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  53.92 
 
 
221 aa  217  1e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  55.66 
 
 
225 aa  217  1e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  56.16 
 
 
218 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.79 
 
 
261 aa  215  5e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  54.79 
 
 
225 aa  215  6e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  55.76 
 
 
215 aa  214  7e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  56.28 
 
 
222 aa  214  1e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.94 
 
 
227 aa  214  1e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  50.66 
 
 
233 aa  214  1e-54  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.88 
 
 
236 aa  213  2e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  53.42 
 
 
218 aa  213  2e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.73 
 
 
230 aa  212  3e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  53.42 
 
 
225 aa  212  4e-54  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  53.46 
 
 
217 aa  212  4e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.74 
 
 
247 aa  211  5e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  53.49 
 
 
213 aa  211  5e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  52.94 
 
 
220 aa  211  6e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  56.94 
 
 
219 aa  211  8e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  53.88 
 
 
228 aa  211  9e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.78 
 
 
219 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  53.21 
 
 
221 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  54.05 
 
 
228 aa  209  2e-53  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  50 
 
 
214 aa  210  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  52.63 
 
 
234 aa  209  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.38 
 
 
234 aa  209  2e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  56.05 
 
 
222 aa  208  4e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  43.43 
 
 
261 aa  209  4e-53  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  53.02 
 
 
219 aa  207  7e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  50.43 
 
 
231 aa  208  7e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.68 
 
 
229 aa  207  7e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.66 
 
 
224 aa  207  8e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.57 
 
 
223 aa  207  8e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  53.49 
 
 
215 aa  207  1e-52  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.95 
 
 
215 aa  207  1e-52  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  54.05 
 
 
225 aa  207  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.53 
 
 
215 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.67 
 
 
220 aa  206  2e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  55.45 
 
 
225 aa  206  2e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  52.34 
 
 
216 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  51.75 
 
 
230 aa  206  3e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  52.79 
 
 
239 aa  206  3e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.17 
 
 
219 aa  206  3e-52  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  51.63 
 
 
219 aa  206  3e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  53.15 
 
 
226 aa  206  3e-52  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.5 
 
 
225 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.09 
 
 
219 aa  205  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.21 
 
 
221 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.73 
 
 
230 aa  205  4e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  51.61 
 
 
215 aa  205  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  50 
 
 
218 aa  204  6e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  55.61 
 
 
220 aa  204  6e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50.67 
 
 
231 aa  204  6e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  51.8 
 
 
223 aa  205  6e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  54.88 
 
 
221 aa  204  7e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.64 
 
 
226 aa  204  8e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  51.79 
 
 
223 aa  204  9e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.38 
 
 
239 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  51.33 
 
 
226 aa  203  1e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  56.28 
 
 
217 aa  203  1e-51  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.85 
 
 
225 aa  203  1e-51  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  50.22 
 
 
242 aa  203  2e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  51.82 
 
 
230 aa  203  2e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  52.27 
 
 
233 aa  202  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  50.23 
 
 
235 aa  203  2e-51  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  52.91 
 
 
222 aa  202  3e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  52.94 
 
 
230 aa  202  3e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  54.13 
 
 
221 aa  202  3e-51  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  50.88 
 
 
226 aa  202  3e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
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