More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6827 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  100 
 
 
516 aa  1031    Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  52.16 
 
 
545 aa  434  1e-120  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  50.84 
 
 
520 aa  409  1e-113  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  48.31 
 
 
573 aa  347  4e-94  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  43.09 
 
 
625 aa  306  5.0000000000000004e-82  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  44.51 
 
 
486 aa  254  2.0000000000000002e-66  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  46.36 
 
 
512 aa  243  6e-63  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  38.5 
 
 
526 aa  242  1e-62  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  37.35 
 
 
491 aa  237  3e-61  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  43.05 
 
 
560 aa  226  8e-58  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.83 
 
 
468 aa  210  5e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  29.89 
 
 
478 aa  190  5.999999999999999e-47  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  32.45 
 
 
530 aa  189  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  34.98 
 
 
521 aa  187  4e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  37.98 
 
 
508 aa  185  2.0000000000000003e-45  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  32.34 
 
 
481 aa  184  3e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.91 
 
 
505 aa  183  7e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  33.41 
 
 
506 aa  181  2.9999999999999997e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  30 
 
 
734 aa  178  2e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  34.52 
 
 
468 aa  178  2e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  31.94 
 
 
549 aa  178  2e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  31.7 
 
 
509 aa  178  3e-43  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  32.44 
 
 
504 aa  177  4e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  29.9 
 
 
618 aa  176  9.999999999999999e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  33.19 
 
 
481 aa  174  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  32.68 
 
 
497 aa  174  5e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  33.47 
 
 
1336 aa  169  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  29.77 
 
 
732 aa  166  1.0000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  29.88 
 
 
480 aa  164  2.0000000000000002e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  35.4 
 
 
390 aa  162  1e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  35.76 
 
 
393 aa  161  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  37.3 
 
 
453 aa  161  3e-38  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  31.61 
 
 
522 aa  160  7e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  32.07 
 
 
551 aa  157  4e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  32.64 
 
 
584 aa  156  8e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  31.59 
 
 
567 aa  156  1e-36  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  29.07 
 
 
520 aa  155  2e-36  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  37.5 
 
 
379 aa  153  7e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  32.78 
 
 
487 aa  153  8e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  32.13 
 
 
336 aa  147  6e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  31.01 
 
 
517 aa  146  7.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  30.53 
 
 
465 aa  146  1e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  32.44 
 
 
619 aa  145  2e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  39.2 
 
 
320 aa  145  2e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  29.16 
 
 
684 aa  145  2e-33  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  37.55 
 
 
296 aa  144  3e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  28.37 
 
 
521 aa  143  7e-33  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  33.08 
 
 
307 aa  142  9.999999999999999e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  34.33 
 
 
434 aa  140  3.9999999999999997e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  37.05 
 
 
414 aa  140  3.9999999999999997e-32  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  34.25 
 
 
434 aa  140  7.999999999999999e-32  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  30.75 
 
 
649 aa  138  3.0000000000000003e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  37.36 
 
 
326 aa  137  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  36.14 
 
 
420 aa  137  5e-31  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  29.17 
 
 
699 aa  136  7.000000000000001e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  29.17 
 
 
699 aa  136  7.000000000000001e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  28.63 
 
 
499 aa  136  9e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  29.25 
 
 
701 aa  136  9e-31  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31.29 
 
 
400 aa  136  9.999999999999999e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  36.08 
 
 
404 aa  133  6e-30  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  27.91 
 
 
493 aa  133  6.999999999999999e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  27.92 
 
 
497 aa  133  7.999999999999999e-30  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  34.6 
 
 
643 aa  132  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  33.91 
 
 
409 aa  132  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  32.28 
 
 
395 aa  131  3e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  34.6 
 
 
303 aa  130  5.0000000000000004e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  32.04 
 
 
382 aa  130  6e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  30.25 
 
 
676 aa  128  2.0000000000000002e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  33.46 
 
 
540 aa  128  2.0000000000000002e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  32.85 
 
 
307 aa  128  3e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  28.27 
 
 
490 aa  127  6e-28  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  32.92 
 
 
417 aa  126  8.000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  28.27 
 
 
490 aa  126  9e-28  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  33.33 
 
 
407 aa  126  9e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  28.27 
 
 
490 aa  126  9e-28  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  26.54 
 
 
538 aa  126  1e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.05 
 
 
349 aa  126  1e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  34.57 
 
 
363 aa  125  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  33.33 
 
 
313 aa  125  2e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  32.68 
 
 
306 aa  125  2e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  29.04 
 
 
512 aa  124  3e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  29.54 
 
 
687 aa  124  4e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  31.52 
 
 
404 aa  123  9e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  35.69 
 
 
424 aa  122  9.999999999999999e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  34.63 
 
 
311 aa  122  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  34.63 
 
 
311 aa  122  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  34.63 
 
 
311 aa  122  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  33.76 
 
 
389 aa  122  1.9999999999999998e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  28.83 
 
 
463 aa  122  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  27.85 
 
 
489 aa  121  3.9999999999999996e-26  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  27.41 
 
 
493 aa  121  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  36.1 
 
 
395 aa  120  4.9999999999999996e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
396 aa  120  6e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  31.39 
 
 
466 aa  119  9.999999999999999e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1145  cell envelope-related transcriptional attenuator  27.61 
 
 
543 aa  115  1.0000000000000001e-24  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  33.73 
 
 
362 aa  115  2.0000000000000002e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  28.92 
 
 
365 aa  113  1.0000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  31.25 
 
 
410 aa  113  1.0000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  29.79 
 
 
442 aa  112  1.0000000000000001e-23  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  31.06 
 
 
365 aa  112  2.0000000000000002e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
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