10 homologs were found in PanDaTox collection
for query gene Franean1_5438 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_5438  hypothetical protein  100 
 
 
770 aa  1555    Frankia sp. EAN1pec  Bacteria  normal  0.180108  normal  0.0529249 
 
 
-
 
NC_007777  Francci3_0933  hypothetical protein  38.87 
 
 
777 aa  398  1e-109  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0031  hypothetical protein  35.79 
 
 
610 aa  326  1e-87  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1251  hypothetical protein  33.97 
 
 
561 aa  184  4.0000000000000006e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.278393 
 
 
-
 
NC_013595  Sros_0910  hypothetical protein  26.25 
 
 
647 aa  122  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0466  hypothetical protein  26.26 
 
 
638 aa  120  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.744888 
 
 
-
 
NC_013510  Tcur_0644  hypothetical protein  27.52 
 
 
642 aa  119  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2662  Serine/threonine protein kinase-like protein  49.33 
 
 
814 aa  51.6  0.00005  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00893552  normal 
 
 
-
 
NC_014210  Ndas_4349  hypothetical protein  32.69 
 
 
716 aa  49.3  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.589323  normal  0.336311 
 
 
-
 
NC_014210  Ndas_4666  hypothetical protein  33.33 
 
 
233 aa  48.1  0.0006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
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