More than 300 homologs were found in PanDaTox collection
for query gene Franean1_4054 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013510  Tcur_4635  acyl-CoA dehydrogenase domain protein  82.94 
 
 
386 aa  662    Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4054  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
384 aa  779    Frankia sp. EAN1pec  Bacteria  normal  normal  0.168546 
 
 
-
 
NC_007777  Francci3_2430  acyl-CoA dehydrogenase-like  78.33 
 
 
385 aa  625  1e-178  Frankia sp. CcI3  Bacteria  decreased coverage  0.000440313  normal  0.478447 
 
 
-
 
NC_009077  Mjls_4228  isovaleryl-CoA dehydrogenase  76.32 
 
 
385 aa  608  1e-173  Mycobacterium sp. JLS  Bacteria  normal  0.950044  normal  0.66405 
 
 
-
 
NC_008146  Mmcs_0182  butyryl-CoA dehydrogenase  76.88 
 
 
385 aa  606  9.999999999999999e-173  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0171  butyryl-CoA dehydrogenase  76.88 
 
 
385 aa  607  9.999999999999999e-173  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260341 
 
 
-
 
NC_008705  Mkms_0191  butyryl-CoA dehydrogenase  76.88 
 
 
385 aa  606  9.999999999999999e-173  Mycobacterium sp. KMS  Bacteria  normal  0.297032  normal 
 
 
-
 
NC_009338  Mflv_0446  butyryl-CoA dehydrogenase  75.07 
 
 
385 aa  600  1e-170  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.981915  normal 
 
 
-
 
NC_013441  Gbro_4180  acyl-CoA dehydrogenase domain protein  73.63 
 
 
383 aa  595  1e-169  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0221  butyryl-CoA dehydrogenase  75.07 
 
 
385 aa  575  1.0000000000000001e-163  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0556 
 
 
-
 
NC_009565  TBFG_10217  acyl-CoA dehydrogenase fadE3  71.19 
 
 
373 aa  518  1e-146  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2091  acyl-CoA dehydrogenase domain-containing protein  65.96 
 
 
386 aa  505  9.999999999999999e-143  Thermobispora bispora DSM 43833  Bacteria  normal  0.0244674  normal  0.176746 
 
 
-
 
NC_010681  Bphyt_0615  acyl-CoA dehydrogenase domain protein  51.18 
 
 
387 aa  416  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  0.210833  normal  0.0397055 
 
 
-
 
NC_007951  Bxe_A4085  putative acyl-CoA dehydrogenase  50.92 
 
 
387 aa  414  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  0.14575  normal 
 
 
-
 
NC_007908  Rfer_4169  butyryl-CoA dehydrogenase  49.74 
 
 
383 aa  408  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.0614852  n/a   
 
 
-
 
NC_007908  Rfer_4181  butyryl-CoA dehydrogenase  49.74 
 
 
383 aa  408  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.0181503  n/a   
 
 
-
 
NC_013510  Tcur_2510  acyl-CoA dehydrogenase domain protein  52.09 
 
 
397 aa  405  1.0000000000000001e-112  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0195405  n/a   
 
 
-
 
NC_008699  Noca_4073  acyl-CoA dehydrogenase domain-containing protein  51.19 
 
 
386 aa  400  9.999999999999999e-111  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  51.06 
 
 
386 aa  395  1e-109  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_007777  Francci3_2167  butyryl-CoA dehydrogenase  50.13 
 
 
399 aa  394  1e-108  Frankia sp. CcI3  Bacteria  normal  0.592182  normal  0.710802 
 
 
-
 
NC_013441  Gbro_1523  acyl-CoA dehydrogenase domain protein  48.3 
 
 
397 aa  393  1e-108  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0413288  n/a   
 
 
-
 
NC_009338  Mflv_4367  butyryl-CoA dehydrogenase  49.1 
 
 
397 aa  389  1e-107  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1977  butyryl-CoA dehydrogenase  49.61 
 
 
397 aa  389  1e-107  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1740  acyl-CoA dehydrogenase domain-containing protein  49.1 
 
 
397 aa  385  1e-106  Mycobacterium sp. JLS  Bacteria  normal  0.0177648  normal 
 
 
-
 
NC_014165  Tbis_2093  acyl-CoA dehydrogenase domain-containing protein  49.22 
 
 
398 aa  387  1e-106  Thermobispora bispora DSM 43833  Bacteria  normal  0.0300334  normal  0.0497691 
 
 
-
 
NC_008146  Mmcs_1759  acyl-CoA dehydrogenase-like protein  49.1 
 
 
397 aa  385  1e-106  Mycobacterium sp. MCS  Bacteria  normal  0.218239  n/a   
 
 
-
 
NC_013757  Gobs_1139  acyl-CoA dehydrogenase domain protein  48.44 
 
 
399 aa  385  1e-106  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1806  acyl-CoA dehydrogenase domain-containing protein  49.1 
 
 
397 aa  385  1e-106  Mycobacterium sp. KMS  Bacteria  normal  normal  0.580831 
 
 
-
 
NC_013739  Cwoe_4224  acyl-CoA dehydrogenase domain protein  48.07 
 
 
400 aa  382  1e-105  Conexibacter woesei DSM 14684  Bacteria  normal  0.0700017  normal  0.0824066 
 
 
-
 
NC_013131  Caci_7768  acyl-CoA dehydrogenase domain protein  46.83 
 
 
397 aa  379  1e-104  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1456  acyl-CoA dehydrogenase domain-containing protein  46.86 
 
 
398 aa  374  1e-102  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4031  acyl-CoA dehydrogenase domain-containing protein  48.67 
 
 
399 aa  366  1e-100  Frankia sp. EAN1pec  Bacteria  normal  0.328111  normal  0.707323 
 
 
-
 
NC_008228  Patl_2715  acyl-CoA dehydrogenase-like  46.61 
 
 
391 aa  366  1e-100  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.785448  n/a   
 
 
-
 
NC_009953  Sare_0673  acyl-CoA dehydrogenase domain-containing protein  47.37 
 
 
400 aa  367  1e-100  Salinispora arenicola CNS-205  Bacteria  normal  0.514226  normal 
 
 
-
 
NC_009921  Franean1_4533  acyl-CoA dehydrogenase domain-containing protein  48.4 
 
 
398 aa  363  2e-99  Frankia sp. EAN1pec  Bacteria  normal  0.0920452  normal 
 
 
-
 
NC_009380  Strop_0727  acyl-CoA dehydrogenase domain-containing protein  46.32 
 
 
398 aa  362  7.0000000000000005e-99  Salinispora tropica CNB-440  Bacteria  normal  normal  0.230975 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  43.12 
 
 
381 aa  304  2.0000000000000002e-81  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  42.4 
 
 
381 aa  295  1e-78  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_013743  Htur_1175  acyl-CoA dehydrogenase domain protein  42.33 
 
 
381 aa  294  2e-78  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011894  Mnod_4511  acyl-CoA dehydrogenase domain protein  43.52 
 
 
560 aa  293  3e-78  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.547594  n/a   
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  43.46 
 
 
394 aa  293  4e-78  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_013202  Hmuk_2909  acyl-CoA dehydrogenase domain protein  43.49 
 
 
389 aa  288  9e-77  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.214496  normal 
 
 
-
 
NC_010511  M446_4575  isovaleryl-CoA dehydrogenase  43.26 
 
 
560 aa  285  1.0000000000000001e-75  Methylobacterium sp. 4-46  Bacteria  normal  0.138907  hitchhiker  0.00955586 
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  41.64 
 
 
383 aa  283  4.0000000000000003e-75  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2228  acyl-CoA dehydrogenase domain-containing protein  41.71 
 
 
562 aa  283  5.000000000000001e-75  Methylobacterium extorquens PA1  Bacteria  normal  0.489531  normal  0.489903 
 
 
-
 
NC_009719  Plav_1613  acyl-CoA dehydrogenase domain-containing protein  41.94 
 
 
568 aa  282  7.000000000000001e-75  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.10785  normal 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  41.42 
 
 
384 aa  282  7.000000000000001e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_013744  Htur_4372  acyl-CoA dehydrogenase domain protein  41.07 
 
 
374 aa  282  8.000000000000001e-75  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.367452  n/a   
 
 
-
 
NC_011757  Mchl_2504  acyl-CoA dehydrogenase domain protein  41.45 
 
 
562 aa  282  9e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0181987  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  41.55 
 
 
376 aa  281  9e-75  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  41.42 
 
 
384 aa  281  1e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  41.11 
 
 
383 aa  280  2e-74  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  41.29 
 
 
375 aa  281  2e-74  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  42.18 
 
 
379 aa  281  2e-74  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  41.11 
 
 
383 aa  280  3e-74  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_2500  acyl-CoA dehydrogenase domain protein  40.85 
 
 
386 aa  280  4e-74  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.0453809  normal  0.399884 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
375 aa  279  7e-74  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_007958  RPD_3106  acyl-CoA dehydrogenase-like  42.29 
 
 
375 aa  278  1e-73  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0271451 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
375 aa  278  1e-73  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_013202  Hmuk_2082  acyl-CoA dehydrogenase domain protein  39.47 
 
 
376 aa  278  2e-73  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010725  Mpop_2186  acyl-CoA dehydrogenase domain protein  41.45 
 
 
562 aa  278  2e-73  Methylobacterium populi BJ001  Bacteria  normal  0.0552217  normal 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  41.11 
 
 
383 aa  276  3e-73  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  39.52 
 
 
384 aa  276  3e-73  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  41.02 
 
 
376 aa  277  3e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  39.52 
 
 
384 aa  276  3e-73  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  40.59 
 
 
384 aa  277  3e-73  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_007974  Rmet_4427  Butyryl-CoA dehydrogenase  39.33 
 
 
388 aa  276  3e-73  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000160956  normal  0.322206 
 
 
-
 
NC_010505  Mrad2831_4351  acyl-CoA dehydrogenase domain-containing protein  41.19 
 
 
560 aa  276  4e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.05445  normal 
 
 
-
 
NC_009049  Rsph17029_0312  isovaleryl-CoA dehydrogenase  39.8 
 
 
555 aa  276  4e-73  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  39.36 
 
 
381 aa  276  5e-73  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  41.53 
 
 
379 aa  276  6e-73  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  40.75 
 
 
375 aa  275  8e-73  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  40.21 
 
 
380 aa  275  8e-73  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  39.36 
 
 
376 aa  275  1.0000000000000001e-72  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  43.65 
 
 
382 aa  275  1.0000000000000001e-72  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  39.36 
 
 
381 aa  275  1.0000000000000001e-72  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  39.36 
 
 
381 aa  275  1.0000000000000001e-72  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  41.76 
 
 
375 aa  275  1.0000000000000001e-72  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_011004  Rpal_2548  acyl-CoA dehydrogenase domain protein  41.76 
 
 
375 aa  275  1.0000000000000001e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314153  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  39.36 
 
 
376 aa  274  2.0000000000000002e-72  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  39.36 
 
 
376 aa  274  2.0000000000000002e-72  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  39.36 
 
 
376 aa  274  2.0000000000000002e-72  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  41.02 
 
 
376 aa  274  2.0000000000000002e-72  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  39.36 
 
 
376 aa  274  2.0000000000000002e-72  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2576  acyl-CoA dehydrogenase domain protein  40.74 
 
 
378 aa  274  2.0000000000000002e-72  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  39.36 
 
 
376 aa  273  3e-72  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3825  butyryl-CoA dehydrogenase  38.14 
 
 
400 aa  273  3e-72  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2567  acyl-CoA dehydrogenase domain-containing protein  39.85 
 
 
555 aa  273  4.0000000000000004e-72  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.349993 
 
 
-
 
NC_007643  Rru_A3064  isovaleryl-CoA dehydrogenase  41.99 
 
 
563 aa  273  5.000000000000001e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.326905  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  38.87 
 
 
379 aa  273  5.000000000000001e-72  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  41.16 
 
 
380 aa  272  6e-72  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009720  Xaut_0310  acyl-CoA dehydrogenase domain-containing protein  41.13 
 
 
563 aa  272  7e-72  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0589554  normal  0.08283 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  40.26 
 
 
377 aa  272  7e-72  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_007493  RSP_1679  acyl-CoA dehydrogenase  39.54 
 
 
548 aa  271  1e-71  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0534807  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  39.68 
 
 
379 aa  271  1e-71  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2444  isovaleryl-CoA dehydrogenase  39.69 
 
 
567 aa  271  1e-71  Ruegeria sp. TM1040  Bacteria  normal  0.590306  normal  0.477736 
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  40.26 
 
 
377 aa  271  1e-71  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  41.49 
 
 
394 aa  271  1e-71  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  40.21 
 
 
377 aa  270  2e-71  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  38.74 
 
 
379 aa  271  2e-71  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
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