56 homologs were found in PanDaTox collection
for query gene Franean1_1685 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_1685  PaaX family transcriptional regulator  100 
 
 		 333 aa  652    Frankia sp. EAN1pec  Bacteria  normal  0.0710641  normal  0.260669 
 
 
-
 
NC_014151  Cfla_0294  transcriptional regulator, PaaX family  46.29 
 
 		 318 aa  239  5e-62  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0429653  hitchhiker  0.0000864342 
 
 
-
 
NC_014151  Cfla_2025  transcriptional regulator, PaaX family  39.93 
 
 		 306 aa  177  2e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_2835  transcriptional regulator, PaaX family  28.52 
 
 		 285 aa  140  3.9999999999999997e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_2150  transcriptional regulator, PaaX family  38.91 
 
 		 289 aa  140  3.9999999999999997e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.933136  normal  0.276366 
 
 
-
 
NC_013411  GYMC61_2859  transcriptional regulator, PaaX family  27.5 
 
 		 285 aa  135  9e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_2009  transcriptional regulator, PaaX family  34.57 
 
 		 281 aa  125  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.429433  normal  1 
 
 
-
 
NC_013131  Caci_4899  transcriptional regulator, PaaX family  31.19 
 
 		 276 aa  123  4e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.425131  normal  1 
 
 
-
 
NC_013235  Namu_0588  transcriptional regulator, PaaX family  35.66 
 
 		 276 aa  121  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6455  transcriptional regulator, PaaX family  34.4 
 
 		 260 aa  118  9.999999999999999e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_19070  phenylacetic acid-responsive transcriptional repressor  30.27 
 
 		 292 aa  112  8.000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0202563  normal  1 
 
 
-
 
NC_014165  Tbis_1609  PaaX family transcriptional regulator  30.2 
 
 		 258 aa  111  2.0000000000000002e-23  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_0289  transcriptional regulator, PaaX family  30.22 
 
 		 280 aa  100  3e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.010887  hitchhiker  0.0000784974 
 
 
-
 
NC_010501  PputW619_2623  PaaX family transcriptional regulator  27.53 
 
 		 334 aa  97.8  2e-19  Pseudomonas putida W619  Bacteria  normal  0.312733  normal  0.0873289 
 
 
-
 
NC_010322  PputGB1_2610  PaaX family transcriptional regulator  26.74 
 
 		 334 aa  95.9  1e-18  Pseudomonas putida GB-1  Bacteria  normal  0.218497  normal  0.0704814 
 
 
-
 
NC_010506  Swoo_0216  PaaX family transcriptional regulator  26.67 
 
 		 311 aa  94  3e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0165647 
 
 
-
 
NC_009512  Pput_2473  PaaX family transcriptional regulator  26.83 
 
 		 334 aa  93.6  5e-18  Pseudomonas putida F1  Bacteria  normal  0.303711  normal  1 
 
 
-
 
NC_013946  Mrub_2629  PaaX family transcriptional regulator  28.45 
 
 		 259 aa  92.4  1e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.495501  normal  1 
 
 
-
 
NC_002947  PP_3286  PaaX family transcriptional regulator  27.67 
 
 		 307 aa  91.3  2e-17  Pseudomonas putida KT2440  Bacteria  normal  0.17765  normal  1 
 
 
-
 
NC_009953  Sare_0655  PaaX family transcriptional regulator  32.24 
 
 		 272 aa  90.5  3e-17  Salinispora arenicola CNS-205  Bacteria  normal  0.0748596  hitchhiker  0.00291671 
 
 
-
 
NC_007348  Reut_B3734  phenylacetic acid degradation operon negative regulatory protein PaaX  29.82 
 
 		 307 aa  90.5  3e-17  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_0708  PaaX family transcriptional regulator  31.84 
 
 		 272 aa  90.1  4e-17  Salinispora tropica CNB-440  Bacteria  normal  0.719013  normal  0.640912 
 
 
-
 
NC_013530  Xcel_0309  transcriptional regulator, PaaX family  30.99 
 
 		 302 aa  89  1e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0787  transcriptional regulator, PaaX family  35.58 
 
 		 268 aa  85.9  9e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_1585  phenylacetic acid degradation operon negative regulatory protein PaaX  27.17 
 
 		 316 aa  85.5  0.000000000000001  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8420  putative transcriptional regulator, PaaX family  30.49 
 
 		 260 aa  85.5  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289328  normal  1 
 
 
-
 
NC_011662  Tmz1t_0196  transcriptional regulator, PaaX family  27.95 
 
 		 319 aa  84.3  0.000000000000002  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1206  PaaX domain-containing protein, C- domain  32.78 
 
 		 258 aa  84  0.000000000000003  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_2246  transcriptional regulator, PaaX family  27.17 
 
 		 316 aa  84  0.000000000000003  Escherichia coli DH1  Bacteria  normal  0.218129  n/a   
 
 
-
 
NC_009800  EcHS_A1486  phenylacetic acid degradation operon negative regulatory protein PaaX  27.17 
 
 		 316 aa  83.2  0.000000000000005  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2864  phenylacetic acid degradation operon negative regulatory protein paaX  29.96 
 
 		 293 aa  83.6  0.000000000000005  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00499823  normal  0.0484276 
 
 
-
 
NC_010468  EcolC_2256  PaaX family transcriptional regulator  27.17 
 
 		 316 aa  83.2  0.000000000000005  Escherichia coli ATCC 8739  Bacteria  normal  0.203735  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3103  PaaX family transcriptional regulator  25.2 
 
 		 307 aa  82.4  0.000000000000009  Marinomonas sp. MWYL1  Bacteria  decreased coverage  0.000000661945  decreased coverage  0.0000397547 
 
 
-
 
NC_007298  Daro_0386  phenylacetic acid degradation operon negative regulatory protein PaaX  28.73 
 
 		 352 aa  81.6  0.00000000000002  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000187716  normal  0.0170462 
 
 
-
 
NC_013131  Caci_5523  transcriptional regulator, PaaX family  29.96 
 
 		 267 aa  81.3  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.543092 
 
 
-
 
NC_008709  Ping_0661  PaaX domain-containing protein, C- domain  22.26 
 
 		 285 aa  80.5  0.00000000000004  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0391  putative transcriptional regulator, PaaX family  53.09 
 
 		 154 aa  77  0.0000000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0895  PaaX family transcriptional regulator  28.46 
 
 		 305 aa  77  0.0000000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.947925  normal  1 
 
 
-
 
NC_014212  Mesil_0980  transcriptional regulator, PaaX family  27.64 
 
 		 259 aa  76.3  0.0000000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.148761 
 
 
-
 
NC_009832  Spro_3083  PaaX family transcriptional regulator  23.62 
 
 		 312 aa  74.7  0.000000000002  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.415086 
 
 
-
 
NC_011662  Tmz1t_1514  transcriptional regulator, PaaX family  28.11 
 
 		 316 aa  73.6  0.000000000004  Thauera sp. MZ1T  Bacteria  normal  0.139923  n/a   
 
 
-
 
NC_013947  Snas_0703  transcriptional regulator, PaaX family  30.12 
 
 		 259 aa  71.2  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1521  phenylacetic acid degradation operon negative regulatory protein PaaX  27.2 
 
 		 312 aa  70.5  0.00000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0692  phenylacetic acid degradation operon negative regulatory protein PaaX  27.56 
 
 		 287 aa  65.1  0.000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.717402  normal  1 
 
 
-
 
NC_011894  Mnod_7200  transcriptional regulator, PaaX family  27.34 
 
 		 292 aa  60.1  0.00000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.803046  n/a   
 
 
-
 
NC_009620  Smed_4146  PaaX family transcriptional regulator  28.24 
 
 		 305 aa  59.7  0.00000007  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.85173 
 
 
-
 
NC_014158  Tpau_3784  putative transcriptional regulator, PaaX family  28.63 
 
 		 277 aa  59.3  0.00000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1864  PaaX family transcriptional regulator  32.65 
 
 		 252 aa  48.9  0.0001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4282  putative transcriptional regulator, PaaX family  36.63 
 
 		 254 aa  47  0.0005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.399485  n/a   
 
 
-
 
NC_009484  Acry_0094  PaaX family transcriptional regulator  24.9 
 
 		 289 aa  46.6  0.0006  Acidiphilium cryptum JF-5  Bacteria  normal  0.339453  n/a   
 
 
-
 
NC_011894  Mnod_3357  transcriptional regulator, PaaX family  22.26 
 
 		 301 aa  44.3  0.003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_0659  PaaX-like  30.7 
 
 		 265 aa  44.3  0.003  Jannaschia sp. CCS1  Bacteria  normal  0.702789  normal  1 
 
 
-
 
NC_009338  Mflv_5085  PaaX domain-containing protein, C- domain  28.9 
 
 		 244 aa  43.5  0.004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.706044 
 
 
-
 
NC_008146  Mmcs_0977  PaaX-like protein  27.27 
 
 		 243 aa  43.1  0.007  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_1005  PaaX domain-containing protein, C- domain  27.27 
 
 		 243 aa  43.1  0.007  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.457167 
 
 
-
 
NC_008705  Mkms_0995  PaaX domain-containing protein, C- domain  27.27 
 
 		 243 aa  43.1  0.007  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
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