86 homologs were found in PanDaTox collection
for query gene Francci3_1816 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_1816  flavoprotein  100 
 
 		 183 aa  361  3e-99  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3994  hypothetical protein  84.7 
 
 		 184 aa  319  1.9999999999999998e-86  Frankia sp. CcI3  Bacteria  normal  1  normal  0.883416 
 
 
-
 
NC_009380  Strop_1130  hypothetical protein  52.66 
 
 		 189 aa  163  1.0000000000000001e-39  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1674  hypothetical protein  44.38 
 
 		 182 aa  147  8e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.524184 
 
 
-
 
NC_014211  Ndas_5281  flavoprotein  49.32 
 
 		 181 aa  142  3e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_0396  hypothetical protein  51.32 
 
 		 186 aa  138  3.9999999999999997e-32  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8590  flavoprotein  44.25 
 
 		 177 aa  129  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388275  normal  0.325413 
 
 
-
 
NC_009953  Sare_3598  hypothetical protein  42.16 
 
 		 198 aa  125  3e-28  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000143364 
 
 
-
 
NC_009921  Franean1_0194  hypothetical protein  50.68 
 
 		 178 aa  122  4e-27  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_2077  flavoprotein  45.39 
 
 		 184 aa  120  9.999999999999999e-27  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00706946  n/a   
 
 
-
 
NC_014158  Tpau_0038  flavoprotein  45.27 
 
 		 172 aa  120  9.999999999999999e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3358  hypothetical protein  39.78 
 
 		 198 aa  119  3e-26  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_1630  flavoprotein  40.24 
 
 		 169 aa  113  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.424673 
 
 
-
 
NC_013510  Tcur_0670  flavoprotein  39.63 
 
 		 166 aa  113  2.0000000000000002e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1647  flavoprotein  45.86 
 
 		 168 aa  112  4.0000000000000004e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.16464  normal  1 
 
 
-
 
NC_013947  Snas_4819  flavoprotein  40.27 
 
 		 196 aa  106  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.902814  normal  1 
 
 
-
 
NC_009953  Sare_2851  flavoprotein  42.86 
 
 		 191 aa  104  7e-22  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.293547 
 
 
-
 
NC_009380  Strop_2580  flavoprotein  37.13 
 
 		 191 aa  100  2e-20  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.153426 
 
 
-
 
NC_013093  Amir_5222  flavoprotein  38.51 
 
 		 181 aa  72  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0727824  n/a   
 
 
-
 
NC_013159  Svir_30320  phosphopantothenoylcysteine synthetase/decarboxylase  38.36 
 
 		 192 aa  69.3  0.00000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.418593 
 
 
-
 
NC_009051  Memar_1236  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  33.78 
 
 		 376 aa  57.4  0.0000001  Methanoculleus marisnigri JR1  Archaea  normal  0.310838  n/a   
 
 
-
 
NC_007355  Mbar_A3256  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  31.08 
 
 		 419 aa  54.7  0.0000007  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  0.530562 
 
 
-
 
NC_008942  Mlab_0922  phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase  32.88 
 
 		 377 aa  53.9  0.000001  Methanocorpusculum labreanum Z  Archaea  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_1884  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  29.73 
 
 		 379 aa  53.5  0.000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.0244843  normal  1 
 
 
-
 
NC_007955  Mbur_1187  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  27.03 
 
 		 414 aa  52.4  0.000004  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_1206  flavoprotein  25.36 
 
 		 176 aa  51.6  0.000006  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3412  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  29.22 
 
 		 411 aa  50.4  0.00001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280261  normal  1 
 
 
-
 
NC_013162  Coch_1500  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  30.77 
 
 		 394 aa  50.4  0.00001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_0749  flavoprotein  23.49 
 
 		 176 aa  50.1  0.00002  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_008255  CHU_3015  DNA/pantothenate metabolism flavoprotein  29.66 
 
 		 401 aa  49.7  0.00003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0158  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  29.68 
 
 		 402 aa  49.7  0.00003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.740399  normal  0.0131495 
 
 
-
 
NC_008553  Mthe_1432  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  31.79 
 
 		 412 aa  48.5  0.00005  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0527  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  29.19 
 
 		 418 aa  47.8  0.00009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.485971  unclonable  0.0000000000430726 
 
 
-
 
NC_011761  AFE_0357  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  29.19 
 
 		 418 aa  47.8  0.00009  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.205483  n/a   
 
 
-
 
NC_009715  CCV52592_1267  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  25 
 
 		 391 aa  47.4  0.0001  Campylobacter curvus 525.92  Bacteria  normal  0.0304937  n/a   
 
 
-
 
NC_013739  Cwoe_3211  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  28.66 
 
 		 450 aa  47.4  0.0001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0353325  normal  0.191331 
 
 
-
 
NC_009523  RoseRS_1561  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  28.38 
 
 		 411 aa  47  0.0002  Roseiflexus sp. RS-1  Bacteria  normal  0.588542  normal  1 
 
 
-
 
NC_013223  Dret_2497  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  30.34 
 
 		 405 aa  46.6  0.0002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_4823  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  27.4 
 
 		 415 aa  46.6  0.0002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0976926 
 
 
-
 
NC_008578  Acel_1291  phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase  29.14 
 
 		 415 aa  46.6  0.0002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.814025  normal  0.0626239 
 
 
-
 
NC_012029  Hlac_0837  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  29.5 
 
 		 389 aa  47  0.0002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_7059  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  30.72 
 
 		 406 aa  45.8  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.23359  n/a   
 
 
-
 
NC_013441  Gbro_2347  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  30.08 
 
 		 419 aa  45.8  0.0003  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2576  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  31.94 
 
 		 412 aa  45.8  0.0003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0721941  n/a   
 
 
-
 
NC_013174  Jden_1316  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  28.37 
 
 		 417 aa  46.2  0.0003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.163369  normal  0.285172 
 
 
-
 
NC_010730  SYO3AOP1_1251  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  25.85 
 
 		 395 aa  45.4  0.0004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.932731  n/a   
 
 
-
 
NC_010511  M446_6249  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  30.91 
 
 		 426 aa  45.8  0.0004  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0882091 
 
 
-
 
NC_013158  Huta_0567  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  32.39 
 
 		 386 aa  45.4  0.0005  Halorhabdus utahensis DSM 12940  Archaea  normal  0.685123  n/a   
 
 
-
 
NC_009712  Mboo_1667  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  26.39 
 
 		 397 aa  45.1  0.0006  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.267593  normal  0.691262 
 
 
-
 
NC_013203  Apar_0734  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  29.01 
 
 		 408 aa  44.3  0.0009  Atopobium parvulum DSM 20469  Bacteria  normal  0.117629  normal  1 
 
 
-
 
NC_009441  Fjoh_3467  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  26.97 
 
 		 404 aa  44.3  0.0009  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008687  Pden_3962  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  29.41 
 
 		 436 aa  44.3  0.0009  Paracoccus denitrificans PD1222  Bacteria  normal  0.159664  normal  1 
 
 
-
 
NC_010524  Lcho_2645  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  29.71 
 
 		 419 aa  44.3  0.001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013159  Svir_15640  Phosphopantothenate-cysteine ligase /Phosphopantothenoylcysteine decarboxylase  30.3 
 
 		 412 aa  44.3  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.099445  normal  1 
 
 
-
 
NC_007796  Mhun_0830  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  27.81 
 
 		 378 aa  43.9  0.001  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  0.0426504 
 
 
-
 
NC_009379  Pnuc_1742  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  28.17 
 
 		 403 aa  43.9  0.001  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_6966  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  28.48 
 
 		 428 aa  43.1  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.974514 
 
 
-
 
NC_014230  CA2559_09453  flavoprotein  23.87 
 
 		 403 aa  43.5  0.002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.110985  n/a   
 
 
-
 
NC_011989  Avi_0383  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  28.29 
 
 		 405 aa  43.1  0.002  Agrobacterium vitis S4  Bacteria  normal  0.647608  n/a   
 
 
-
 
NC_011757  Mchl_4295  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  30.63 
 
 		 430 aa  43.5  0.002  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.0903886 
 
 
-
 
NC_008530  LGAS_1278  phosphopantothenoylcysteine synthetase/decarboxylase  29.46 
 
 		 409 aa  43.1  0.002  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.226953  normal  1 
 
 
-
 
NC_008599  CFF8240_0752  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  22.86 
 
 		 387 aa  43.1  0.002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.59612  n/a   
 
 
-
 
NC_009714  CHAB381_0969  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  22.48 
 
 		 392 aa  43.5  0.002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_4880  phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase  29.25 
 
 		 405 aa  43.1  0.002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1124  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  26.17 
 
 		 399 aa  42.4  0.003  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_4055  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  27.92 
 
 		 411 aa  42.4  0.003  Chelativorans sp. BNC1  Bacteria  normal  0.0406209  n/a   
 
 
-
 
NC_008345  Sfri_3829  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  27.13 
 
 		 400 aa  42.7  0.003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0041  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  27.08 
 
 		 404 aa  42.7  0.003  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0078  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  29.25 
 
 		 405 aa  42.7  0.003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.314451  normal  0.694305 
 
 
-
 
NC_013517  Sterm_2539  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  26.03 
 
 		 394 aa  42.4  0.004  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0282514  n/a   
 
 
-
 
NC_013093  Amir_5236  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  28.46 
 
 		 422 aa  42.4  0.004  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_1124  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  31.94 
 
 		 403 aa  42.4  0.004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.454917  n/a   
 
 
-
 
NC_013422  Hneap_0177  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  28.57 
 
 		 393 aa  42.4  0.004  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0367775  n/a   
 
 
-
 
NC_011883  Ddes_0141  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  28.91 
 
 		 417 aa  42  0.005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2571  phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase  29.86 
 
 		 414 aa  41.6  0.006  Methylibium petroleiphilum PM1  Bacteria  normal  0.769444  normal  1 
 
 
-
 
NC_008783  BARBAKC583_1349  bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase  27.86 
 
 		 411 aa  41.6  0.006  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp2552  hypothetical protein  25.64 
 
 		 398 aa  41.6  0.006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010725  Mpop_4399  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  30 
 
 		 446 aa  41.2  0.008  Methylobacterium populi BJ001  Bacteria  normal  0.696481  normal  0.401732 
 
 
-
 
NC_011726  PCC8801_3641  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  26.98 
 
 		 420 aa  41.2  0.008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007794  Saro_0591  phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase  26.85 
 
 		 395 aa  41.2  0.008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.804197  n/a   
 
 
-
 
NC_013161  Cyan8802_2473  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  26.98 
 
 		 420 aa  41.2  0.009  Cyanothece sp. PCC 8802  Bacteria  normal  0.0542278  normal  0.668661 
 
 
-
 
NC_013235  Namu_4160  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  29.41 
 
 		 432 aa  40.8  0.01  Nakamurella multipartita DSM 44233  Bacteria  normal  0.109598  normal  0.292924 
 
 
-
 
NC_013202  Hmuk_2856  phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase  33.82 
 
 		 383 aa  40.8  0.01  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_1725  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  30.63 
 
 		 399 aa  40.8  0.01  Acidiphilium cryptum JF-5  Bacteria  normal  0.695057  n/a   
 
 
-
 
NC_008541  Arth_2257  phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase  29.58 
 
 		 411 aa  40.8  0.01  Arthrobacter sp. FB24  Bacteria  normal  0.210688  n/a   
 
 
-
 
NC_009654  Mmwyl1_0623  phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase  28.87 
 
 		 407 aa  40.8  0.01  Marinomonas sp. MWYL1  Bacteria  normal  1  hitchhiker  0.0000000000683837 
 
 
-
 
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